RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB1	YMR296C	BOI1	P38041	980 aa	Known RBP	13.34	□□□□□ -0.27
LCB1	YMR296C	NIT1	P40447	199 aa		13.34	□□□□□ -0.27
LCB1	YMR296C	KNS1	P32350	737 aa	Predicted RBP	13.34	□□□□□ -0.27
LCB1	YMR296C	PIB2	P53191	635 aa		13.34	□□□□□ -0.27
LCB1	YMR296C	CSR2	Q12734	1121 aa		13.34	□□□□□ -0.27
LCB1	YMR296C	YGL081W	P53156	320 aa		13.33	□□□□□ -0.28
LCB1	YMR296C	HAP5	Q02516	242 aa		13.32	□□□□□ -0.28
LCB1	YMR296C	KEL1	P38853	1164 aa	Known RBP	13.31	□□□□□ -0.28
LCB1	YMR296C	YMR147W	P40218	223 aa	Known RBP	13.31	□□□□□ -0.28
LCB1	YMR296C	AAD16	Q02895	342 aa		13.31	□□□□□ -0.28
LCB1	YMR296C	AIM9	P40053	627 aa	Known RBP	13.3	□□□□□ -0.28
LCB1	YMR296C	RRT6	P53117	311 aa	Predicted RBP	13.3	□□□□□ -0.28
LCB1	YMR296C	KTR1	P27810	393 aa	Known RBP	13.29	□□□□□ -0.28
LCB1	YMR296C	BDH2	P39713	417 aa		13.29	□□□□□ -0.28
LCB1	YMR296C	KRI1	P42846	591 aa	Known RBP	13.29	□□□□□ -0.28
LCB1	YMR296C	PIP2	P52960	996 aa		13.29	□□□□□ -0.28
LCB1	YMR296C	DUS1	P53759	423 aa	Known RBP	13.29	□□□□□ -0.28
LCB1	YMR296C	HRQ1	Q05549	1077 aa		13.29	□□□□□ -0.28
LCB1	YMR296C	HVG1	P0CE11	249 aa		13.28	□□□□□ -0.28
LCB1	YMR296C	GAL2	P13181	574 aa		13.28	□□□□□ -0.28
LCB1	YMR296C	RAD53	P22216	821 aa		13.28	□□□□□ -0.28
LCB1	YMR296C	PBY1	P38254	753 aa		13.28	□□□□□ -0.28
LCB1	YMR296C	ADP1	P25371	1049 aa		13.28	□□□□□ -0.28
LCB1	YMR296C	NPL4	P33755	580 aa		13.28	□□□□□ -0.28
LCB1	YMR296C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	13.28	□□□□□ -0.28	not detected
LCB1	YMR296C	KAR5	Q04746	504 aa		13.28	□□□□□ -0.28
LCB1	YMR296C	CAB3	P36076	571 aa		13.27	□□□□□ -0.29
LCB1	YMR296C	GEF1	P37020	779 aa		13.27	□□□□□ -0.29
LCB1	YMR296C	BIK1	P11709	440 aa		13.26	□□□□□ -0.29
LCB1	YMR296C	CIR1	P42940	261 aa		13.26	□□□□□ -0.29
LCB1	YMR296C	PCL8	Q08966	492 aa		13.26	□□□□□ -0.29
LCB1	YMR296C	PMA1	P05030	918 aa	Known RBP	13.25	□□□□□ -0.29
LCB1	YMR296C	IOC3	P43596	787 aa		13.25	□□□□□ -0.29
LCB1	YMR296C	IRC8	P47046	822 aa		13.25	□□□□□ -0.29
LCB1	YMR296C	HST1	P53685	503 aa		13.25	□□□□□ -0.29
LCB1	YMR296C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.24	□□□□□ -0.29	not detected
LCB1	YMR296C	BSD2	P38356	321 aa		13.24	□□□□□ -0.29
LCB1	YMR296C	STM1	P39015	273 aa	Known RBP	13.24	□□□□□ -0.29
LCB1	YMR296C	BBC1	P47068	1157 aa		13.24	□□□□□ -0.29
LCB1	YMR296C	PKH3	Q03306	898 aa	Predicted RBP	13.24	□□□□□ -0.29
LCB1	YMR296C	COG8	Q04632	607 aa		13.24	□□□□□ -0.29
LCB1	YMR296C	OSH3	P38713	996 aa	Known RBP	13.24	□□□□□ -0.29
LCB1	YMR296C	TPS3	P38426	1054 aa	Known RBP	13.23	□□□□□ -0.29
LCB1	YMR296C	LAM4	P38800	1345 aa		13.23	□□□□□ -0.29
LCB1	YMR296C	MSH4	P40965	878 aa	Predicted RBP	13.22	□□□□□ -0.29
LCB1	YMR296C	PPM2	Q08282	695 aa		13.22	□□□□□ -0.29
LCB1	YMR296C	KEL3	Q08979	651 aa	Predicted RBP	13.22	□□□□□ -0.29
LCB1	YMR296C	TSR3	Q12094	313 aa	Known RBP	13.22	□□□□□ -0.29
LCB1	YMR296C	YBL028C	P38202	106 aa		13.21	□□□□□ -0.29
LCB1	YMR296C	KIN1	P13185	1064 aa		13.21	□□□□□ -0.3
LCB1	YMR296C	EBP2	P36049	427 aa	Known RBP	13.21	□□□□□ -0.3
LCB1	YMR296C	PEX29	Q03370	554 aa		13.21	□□□□□ -0.3
LCB1	YMR296C	TAH18	Q12181	623 aa		13.21	□□□□□ -0.3
LCB1	YMR296C	TIF6	Q12522	245 aa	Known RBP	13.21	□□□□□ -0.3
LCB1	YMR296C	RPL19A	P0CX82	189 aa	Known RBP	13.2	□□□□□ -0.3
LCB1	YMR296C	RPL19B	P0CX83	189 aa	Predicted RBP	13.2	□□□□□ -0.3
LCB1	YMR296C	CST9	Q06032	482 aa		13.2	□□□□□ -0.3
LCB1	YMR296C	GIN4	Q12263	1142 aa		13.2	□□□□□ -0.3
LCB1	YMR296C	PGA3	Q12746	312 aa	Known RBP	13.2	□□□□□ -0.3
LCB1	YMR296C	TUB2	P02557	457 aa	Known RBP	13.19	□□□□□ -0.3
LCB1	YMR296C	RVS167	P39743	482 aa	Known RBP	13.19	□□□□□ -0.3
LCB1	YMR296C	ENP2	P48234	707 aa	Known RBP	13.19	□□□□□ -0.3
LCB1	YMR296C	YPL260W	Q08977	551 aa		13.19	□□□□□ -0.3
LCB1	YMR296C	OPI1	P21957	404 aa		13.18	□□□□□ -0.3
LCB1	YMR296C	HYR1	P40581	163 aa	Known RBP	13.18	□□□□□ -0.3
LCB1	YMR296C	YDL124W	Q07551	312 aa	Known RBP	13.18	□□□□□ -0.3
LCB1	YMR296C	COQ1	P18900	473 aa		13.18	□□□□□ -0.3
LCB1	YMR296C	CIC1	P38779	376 aa	Known RBP	13.18	□□□□□ -0.3
LCB1	YMR296C	SPO22	P40511	975 aa		13.18	□□□□□ -0.3
LCB1	YMR296C	CTF18	P49956	741 aa		13.18	□□□□□ -0.3
LCB1	YMR296C	RSC1	P53236	928 aa		13.18	□□□□□ -0.3
LCB1	YMR296C	KEX1	P09620	729 aa		13.17	□□□□□ -0.3
LCB1	YMR296C	APE3	P37302	537 aa	Known RBP	13.17	□□□□□ -0.3
LCB1	YMR296C	KRE33	P53914	1056 aa	Known RBP	13.17	□□□□□ -0.3
LCB1	YMR296C	RPN12	P32496	274 aa		13.16	□□□□□ -0.3
LCB1	YMR296C	MOT2	P34909	587 aa	Known RBP	13.16	□□□□□ -0.3
LCB1	YMR296C	RKM3	P38222	552 aa		13.16	□□□□□ -0.3
LCB1	YMR296C	YHL050C	P38721	697 aa		13.16	□□□□□ -0.3
LCB1	YMR296C	VID28	P40547	921 aa		13.16	□□□□□ -0.3
LCB1	YMR296C	RBA50	Q04418	439 aa		13.16	□□□□□ -0.3
LCB1	YMR296C	SPT21	P35209	758 aa		13.15	□□□□□ -0.3
LCB1	YMR296C	ACA1	P39970	489 aa		13.15	□□□□□ -0.3
LCB1	YMR296C	PEX19	Q07418	342 aa		13.15	□□□□□ -0.3
LCB1	YMR296C	APC11	Q12157	165 aa		13.15	□□□□□ -0.3
LCB1	YMR296C	SRF1	Q12516	437 aa		13.15	□□□□□ -0.3
LCB1	YMR296C	CHO2	P05374	869 aa	Known RBP	13.15	□□□□□ -0.31
LCB1	YMR296C	MBR1	P23493	339 aa		13.15	□□□□□ -0.31
LCB1	YMR296C	PRX1	P34227	261 aa	Known RBP	13.15	□□□□□ -0.31
LCB1	YMR296C	RTS1	P38903	757 aa		13.15	□□□□□ -0.31
LCB1	YMR296C	ENT3	P47160	408 aa		13.15	□□□□□ -0.31
LCB1	YMR296C	SNU71	P53207	620 aa	Known RBP	13.15	□□□□□ -0.31
LCB1	YMR296C	TPM1	P17536	199 aa	Known RBP	13.14	□□□□□ -0.31
LCB1	YMR296C	PRE8	P23639	250 aa		13.14	□□□□□ -0.31
LCB1	YMR296C	LCD1	Q04377	747 aa		13.14	□□□□□ -0.31
LCB1	YMR296C	MPH3	P0CE00	602 aa		13.13	□□□□□ -0.31
LCB1	YMR296C	MET1	P36150	593 aa		13.13	□□□□□ -0.31
LCB1	YMR296C	CST26	P38226	397 aa		13.13	□□□□□ -0.31
LCB1	YMR296C	AIM44	Q99299	758 aa		13.13	□□□□□ -0.31
LCB1	YMR296C	DID4	P36108	232 aa		13.12	□□□□□ -0.31
LCB1	YMR296C	RSM25	P40496	264 aa		13.12	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms