RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	SLN1	P39928	1220 aa	Predicted RBP	4.58	□□□□□ -1.68
PKR1	YMR123W	GIP2	P40036	548 aa		4.58	□□□□□ -1.68
PKR1	YMR123W	LEM3	P42838	414 aa		4.58	□□□□□ -1.68
PKR1	YMR123W	GUP1	P53154	560 aa		4.58	□□□□□ -1.68
PKR1	YMR123W	BUD9	P53226	547 aa		4.58	□□□□□ -1.68
PKR1	YMR123W	MNL2	Q12205	849 aa		4.58	□□□□□ -1.68
PKR1	YMR123W	TY4B-P	A0A0B7P3V8	1104 aa		4.57	□□□□□ -1.68
PKR1	YMR123W	PYC2	P32327	1180 aa	Known RBP	4.57	□□□□□ -1.68
PKR1	YMR123W	AMN1	P38285	549 aa	Predicted RBP	4.57	□□□□□ -1.68
PKR1	YMR123W	RRM3	P38766	723 aa		4.57	□□□□□ -1.68
PKR1	YMR123W	SOK2	P53438	785 aa	Predicted RBP	4.57	□□□□□ -1.68
PKR1	YMR123W	YNL011C	P53980	444 aa		4.57	□□□□□ -1.68
PKR1	YMR123W	TY4A-H	Q6Q5P6	413 aa		4.57	□□□□□ -1.68
PKR1	YMR123W	AI3	P03877	415 aa		4.56	□□□□□ -1.68
PKR1	YMR123W	HVG1	P0CE11	249 aa		4.56	□□□□□ -1.68
PKR1	YMR123W	SFA1	P32771	386 aa		4.56	□□□□□ -1.68
PKR1	YMR123W	TAT1	P38085	619 aa		4.56	□□□□□ -1.68
PKR1	YMR123W	TED1	P40533	473 aa		4.56	□□□□□ -1.68
PKR1	YMR123W	PRY1	P47032	299 aa		4.56	□□□□□ -1.68
PKR1	YMR123W	CTR9	P89105	1077 aa		4.56	□□□□□ -1.68
PKR1	YMR123W	CDC55	Q00362	526 aa		4.56	□□□□□ -1.68
PKR1	YMR123W	NUT2	Q06213	157 aa		4.56	□□□□□ -1.68
PKR1	YMR123W	GLO4	Q12320	285 aa		4.56	□□□□□ -1.68
PKR1	YMR123W	FRT1	Q99332	602 aa		4.56	□□□□□ -1.68
PKR1	YMR123W	PAN5	P38787	379 aa		4.54	□□□□□ -1.68
PKR1	YMR123W	DSE4	P53753	1117 aa		4.54	□□□□□ -1.68
PKR1	YMR123W	BSC2	Q05611	235 aa		4.54	□□□□□ -1.68
PKR1	YMR123W	COB	P00163	385 aa		4.53	□□□□□ -1.68
PKR1	YMR123W	SAC7	P17121	654 aa		4.53	□□□□□ -1.68
PKR1	YMR123W	STM1	P39015	273 aa	Known RBP	4.53	□□□□□ -1.68
PKR1	YMR123W	YJR124C	P47159	448 aa		4.53	□□□□□ -1.68
PKR1	YMR123W	ARI1	P53111	347 aa	Known RBP	4.53	□□□□□ -1.68
PKR1	YMR123W	MSH6	Q03834	1242 aa		4.53	□□□□□ -1.68
PKR1	YMR123W	GPI13	Q07830	1017 aa		4.53	□□□□□ -1.68
PKR1	YMR123W	GAS5	Q08193	484 aa		4.53	□□□□□ -1.68
PKR1	YMR123W	MCA1	Q08601	432 aa		4.53	□□□□□ -1.68
PKR1	YMR123W	TY1A-NL1	Q12391	440 aa	Known RBP	4.53	□□□□□ -1.68
PKR1	YMR123W	RIM11	P38615	370 aa		4.52	□□□□□ -1.69
PKR1	YMR123W	PPX1	P38698	397 aa		4.52	□□□□□ -1.69
PKR1	YMR123W	YHL050C	P38721	697 aa		4.52	□□□□□ -1.69
PKR1	YMR123W	YHR219W	P38900	624 aa		4.52	□□□□□ -1.69
PKR1	YMR123W	POL5	P39985	1022 aa	Known RBP	4.52	□□□□□ -1.69
PKR1	YMR123W	FET4	P40988	552 aa		4.52	□□□□□ -1.69
PKR1	YMR123W	LSB6	P42951	607 aa		4.52	□□□□□ -1.69
PKR1	YMR123W	YNR065C	P53751	1116 aa		4.52	□□□□□ -1.69
PKR1	YMR123W	YPL034W	Q03083	165 aa		4.52	□□□□□ -1.69
PKR1	YMR123W	HAS1	Q03532	505 aa	Known RBP	4.52	□□□□□ -1.69
PKR1	YMR123W	SPO71	Q03868	1245 aa		4.52	□□□□□ -1.69
PKR1	YMR123W	FLP1	P03870	423 aa		4.51	□□□□□ -1.69
PKR1	YMR123W	PRP5	P21372	849 aa	Predicted RBP	4.51	□□□□□ -1.69
PKR1	YMR123W	RSC6	P25632	483 aa		4.51	□□□□□ -1.69
PKR1	YMR123W	ECM2	P38241	364 aa	Known RBP	4.51	□□□□□ -1.69
PKR1	YMR123W	NEO1	P40527	1151 aa		4.51	□□□□□ -1.69
PKR1	YMR123W	PGM1	P33401	570 aa	Known RBP	4.5	□□□□□ -1.69
PKR1	YMR123W	DUR3	P33413	735 aa		4.5	□□□□□ -1.69
PKR1	YMR123W	YHL008C	P38750	627 aa		4.5	□□□□□ -1.69
PKR1	YMR123W	SAP155	P43612	1002 aa		4.5	□□□□□ -1.69
PKR1	YMR123W	SAM37	P50110	327 aa		4.5	□□□□□ -1.69
PKR1	YMR123W	MSC6	Q08818	692 aa	Known RBP	4.5	□□□□□ -1.69
PKR1	YMR123W	ELG1	Q12050	791 aa		4.5	□□□□□ -1.69
PKR1	YMR123W	CMR1	Q12510	522 aa	Known RBP	4.5	□□□□□ -1.69
PKR1	YMR123W	NPR1	P22211	790 aa		4.49	□□□□□ -1.69
PKR1	YMR123W	MAE1	P36013	669 aa	Known RBP	4.49	□□□□□ -1.69
PKR1	YMR123W	NOC3	Q07896	663 aa	Predicted RBP	4.49	□□□□□ -1.69
PKR1	YMR123W	INP54	Q08227	384 aa	Known RBP	4.49	□□□□□ -1.69
PKR1	YMR123W	NUT1	P53114	1132 aa		4.48	□□□□□ -1.69
PKR1	YMR123W	YIG1	Q08956	461 aa		4.48	□□□□□ -1.69
PKR1	YMR123W	SEC20	P28791	383 aa		4.47	□□□□□ -1.69
PKR1	YMR123W	CIC1	P38779	376 aa	Known RBP	4.47	□□□□□ -1.69
PKR1	YMR123W	NCE103	P53615	221 aa		4.47	□□□□□ -1.69
PKR1	YMR123W	FAR11	P53917	953 aa		4.47	□□□□□ -1.69
PKR1	YMR123W	PMT7	Q06644	662 aa		4.47	□□□□□ -1.69
PKR1	YMR123W	REC8	Q12188	680 aa		4.47	□□□□□ -1.69
PKR1	YMR123W	HTS1	P07263	546 aa	Known RBP	4.46	□□□□□ -1.7
PKR1	YMR123W	PHO4	P07270	312 aa	Known RBP	4.46	□□□□□ -1.7
PKR1	YMR123W	ERS1	P17261	260 aa		4.46	□□□□□ -1.7
PKR1	YMR123W	GCD6	P32501	712 aa	Known RBP	4.46	□□□□□ -1.7
PKR1	YMR123W	VPS35	P34110	944 aa		4.46	□□□□□ -1.7
PKR1	YMR123W	GCV1	P48015	400 aa		4.46	□□□□□ -1.7
PKR1	YMR123W	YAF9	P53930	226 aa		4.46	□□□□□ -1.7
PKR1	YMR123W	SEN54	Q02825	467 aa	Predicted RBP	4.46	□□□□□ -1.7
PKR1	YMR123W	COQ2	P32378	372 aa		4.45	□□□□□ -1.7
PKR1	YMR123W	MET4	P32389	672 aa		4.45	□□□□□ -1.7
PKR1	YMR123W	RVS167	P39743	482 aa	Known RBP	4.45	□□□□□ -1.7
PKR1	YMR123W	YLL054C	Q12244	843 aa		4.45	□□□□□ -1.7
PKR1	YMR123W	WHI5	Q12416	295 aa		4.45	□□□□□ -1.7
PKR1	YMR123W	SAF1	P38352	637 aa		4.44	□□□□□ -1.7
PKR1	YMR123W	KIP3	P53086	805 aa	Known RBP	4.44	□□□□□ -1.7
PKR1	YMR123W	UTP22	P53254	1237 aa	Predicted RBP	4.44	□□□□□ -1.7
PKR1	YMR123W	YCS4	Q06156	1176 aa		4.44	□□□□□ -1.7
PKR1	YMR123W	SLD2	P34252	453 aa		4.43	□□□□□ -1.7
PKR1	YMR123W	IPL1	P38991	367 aa		4.43	□□□□□ -1.7
PKR1	YMR123W	MON1	P53129	644 aa		4.43	□□□□□ -1.7
PKR1	YMR123W	YML020W	Q03722	664 aa		4.43	□□□□□ -1.7
PKR1	YMR123W	YMR074C	Q04773	145 aa		4.43	□□□□□ -1.7
PKR1	YMR123W	NOP8	Q08287	484 aa	Predicted RBP	4.43	□□□□□ -1.7
PKR1	YMR123W	YOR223W	Q12015	292 aa		4.43	□□□□□ -1.7
PKR1	YMR123W	YLR122C	Q12312	125 aa		4.43	□□□□□ -1.7
PKR1	YMR123W	MCM5	P29496	775 aa	Known RBP	4.42	□□□□□ -1.7
PKR1	YMR123W	KAE1	P36132	386 aa		4.42	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms