RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C YRF1-2P40105 1681 aa6.74□□□□□ -1.33
CCS1YMR038C GLY1P37303 387 aaKnown RBP6.73□□□□□ -1.33
CCS1YMR038C TAF5P38129 798 aa6.73□□□□□ -1.33
CCS1YMR038C HXT5P38695 592 aa6.73□□□□□ -1.33
CCS1YMR038C RPN11P43588 306 aaKnown RBP6.73□□□□□ -1.33
CCS1YMR038C YNL165WP53891 406 aa6.73□□□□□ -1.33
CCS1YMR038C YDR444WQ04093 687 aa6.73□□□□□ -1.33
CCS1YMR038C PNP1Q05788 311 aa6.73□□□□□ -1.33
CCS1YMR038C TY3B-IQ7LHG5 1498 aaKnown RBP6.73□□□□□ -1.33
CCS1YMR038C RPS31P05759 152 aaKnown RBP6.72□□□□□ -1.33
CCS1YMR038C ALD2P47771 506 aa6.72□□□□□ -1.33
CCS1YMR038C CWH41P53008 833 aa6.72□□□□□ -1.33
CCS1YMR038C UBP2Q01476 1272 aa6.72□□□□□ -1.33
CCS1YMR038C CAB1Q04430 367 aa6.72□□□□□ -1.33
CCS1YMR038C YLR346CQ06139 101 aa6.72□□□□□ -1.33
CCS1YMR038C TY1A-BLQ12266 440 aa6.71□□□□□ -1.34
CCS1YMR038C RAD9P14737 1309 aa6.71□□□□□ -1.34
CCS1YMR038C CDC19P00549 500 aaKnown RBP6.7□□□□□ -1.34
CCS1YMR038C IRE1P32361 1115 aa6.7□□□□□ -1.34
CCS1YMR038C YBR197CP38306 217 aa6.7□□□□□ -1.34
CCS1YMR038C RRP5Q05022 1729 aaKnown RBP6.7□□□□□ -1.34
CCS1YMR038C AHP1P38013 176 aaKnown RBP6.69□□□□□ -1.34
CCS1YMR038C OSH7P38755 437 aa6.69□□□□□ -1.34
CCS1YMR038C BOL3P39724 118 aa6.69□□□□□ -1.34
CCS1YMR038C SCW11P53189 542 aa6.69□□□□□ -1.34
CCS1YMR038C Q0182Q9ZZW1 134 aa6.69□□□□□ -1.34
CCS1YMR038C MLF3P32047 452 aa6.68□□□□□ -1.34
CCS1YMR038C SCD5P34758 872 aa6.68□□□□□ -1.34
CCS1YMR038C FOX2Q02207 900 aaKnown RBP6.68□□□□□ -1.34
CCS1YMR038C PSH1Q12161 406 aa6.68□□□□□ -1.34
CCS1YMR038C ISC10P32645 267 aa6.67□□□□□ -1.34
CCS1YMR038C BOI1P38041 980 aaKnown RBP6.67□□□□□ -1.34
CCS1YMR038C RAV1P47104 1357 aa6.67□□□□□ -1.34
CCS1YMR038C PDC6P26263 563 aaKnown RBP6.66□□□□□ -1.34
CCS1YMR038C LYS4P49367 693 aaPredicted RBP6.66□□□□□ -1.34
CCS1YMR038C UBP15P50101 1230 aa6.66□□□□□ -1.34
CCS1YMR038C NAM8Q00539 523 aaKnown RBP6.66□□□□□ -1.34
CCS1YMR038C KAR5Q04746 504 aa6.66□□□□□ -1.34
CCS1YMR038C HAT1Q12341 374 aa6.66□□□□□ -1.34
CCS1YMR038C UTP4Q06679 776 aaKnown RBP6.65□□□□□ -1.34
CCS1YMR038C MRPL33P20084 86 aa6.64□□□□□ -1.35
CCS1YMR038C NAP1P25293 417 aaKnown RBP6.64□□□□□ -1.35
CCS1YMR038C ACO2P39533 789 aa6.64□□□□□ -1.35
CCS1YMR038C LSO1Q3E827 93 aa6.64□□□□□ -1.35
CCS1YMR038C FUR4P05316 633 aaKnown RBP6.63□□□□□ -1.35
CCS1YMR038C LEU1P07264 779 aaKnown RBP6.63□□□□□ -1.35
CCS1YMR038C PRP5P21372 849 aaPredicted RBP6.63□□□□□ -1.35
CCS1YMR038C GAR1P28007 205 aaKnown RBP6.63□□□□□ -1.35
CCS1YMR038C RRN6P32786 894 aa6.63□□□□□ -1.35
CCS1YMR038C PRP40P33203 583 aaKnown RBP6.63□□□□□ -1.35
CCS1YMR038C PAF1P38351 445 aa6.63□□□□□ -1.35
CCS1YMR038C DOT5P40553 215 aa6.63□□□□□ -1.35
CCS1YMR038C ROG3P43602 733 aa6.63□□□□□ -1.35
CCS1YMR038C TRL1P09880 827 aaKnown RBP6.62□□□□□ -1.35
CCS1YMR038C VMA3P25515 160 aa6.62□□□□□ -1.35
CCS1YMR038C SSF1P38789 453 aaPredicted RBP6.62□□□□□ -1.35
CCS1YMR038C ERP5P38819 212 aa6.62□□□□□ -1.35
CCS1YMR038C TY1A-MR1Q04215 440 aa6.62□□□□□ -1.35
CCS1YMR038C YDL176WQ12027 708 aa6.62□□□□□ -1.35
CCS1YMR038C RTC1Q08281 1341 aa6.61□□□□□ -1.35
CCS1YMR038C CCP1P00431 361 aa6.61□□□□□ -1.35
CCS1YMR038C KTR2P33550 425 aa6.61□□□□□ -1.35
CCS1YMR038C YTA6P40328 754 aa6.61□□□□□ -1.35
CCS1YMR038C YIR007WP40566 764 aa6.61□□□□□ -1.35
CCS1YMR038C ATG1P53104 897 aa6.61□□□□□ -1.35
CCS1YMR038C CAF120P53836 1060 aa6.61□□□□□ -1.35
CCS1YMR038C APC11Q12157 165 aa6.61□□□□□ -1.35
CCS1YMR038C YBL113CQ7M4S9 792 aa6.61□□□□□ -1.35
CCS1YMR038C TY4B-HP0C2J7 1802 aa6.61□□□□□ -1.35
CCS1YMR038C TY4B-JP47024 1803 aa6.61□□□□□ -1.35
CCS1YMR038C URB1P34241 1764 aaKnown RBP6.61□□□□□ -1.35
CCS1YMR038C EDE1P34216 1381 aa6.6□□□□□ -1.35
CCS1YMR038C RGA1P39083 1007 aa6.6□□□□□ -1.35
CCS1YMR038C NPR2P39923 615 aa6.6□□□□□ -1.35
CCS1YMR038C YML020WQ03722 664 aa6.6□□□□□ -1.35
CCS1YMR038C RPB10P22139 70 aa6.59□□□□□ -1.35
CCS1YMR038C GLO3P38682 493 aaKnown RBP6.59□□□□□ -1.35
CCS1YMR038C QDR2P40474 542 aa6.59□□□□□ -1.35
CCS1YMR038C YEF3P16521 1044 aaKnown RBP6.58□□□□□ -1.36
CCS1YMR038C KAP122P32767 1081 aa6.58□□□□□ -1.36
CCS1YMR038C QDR1P40475 563 aa6.58□□□□□ -1.36
CCS1YMR038C MDJ2P42834 146 aa6.58□□□□□ -1.36
CCS1YMR038C MTO1P53070 669 aa6.58□□□□□ -1.36
CCS1YMR038C RPC31P17890 251 aa6.57□□□□□ -1.36
CCS1YMR038C ENP1P38333 483 aaKnown RBP6.57□□□□□ -1.36
CCS1YMR038C NOP8Q08287 484 aaPredicted RBP6.57□□□□□ -1.36
CCS1YMR038C RGP1P16664 663 aa6.56□□□□□ -1.36
CCS1YMR038C MRPL16P38064 232 aa6.56□□□□□ -1.36
CCS1YMR038C GRS1P38088 690 aaKnown RBP6.56□□□□□ -1.36
CCS1YMR038C CUZ1P53899 274 aa6.56□□□□□ -1.36
CCS1YMR038C RCM1P53972 490 aa6.56□□□□□ -1.36
CCS1YMR038C ROM2P51862 1356 aaKnown RBP6.56□□□□□ -1.36
CCS1YMR038C NAB2P32505 525 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
CCS1YMR038C DYS1P38791 387 aa6.55□□□□□ -1.36
CCS1YMR038C SPR3P41901 512 aa6.55□□□□□ -1.36
CCS1YMR038C TAF8Q03750 510 aa6.55□□□□□ -1.36
CCS1YMR038C STB3Q12427 513 aa6.55□□□□□ -1.36
CCS1YMR038C PSK1P31374 1356 aa6.55□□□□□ -1.36
CCS1YMR038C DIT1P21623 536 aa6.54□□□□□ -1.36
CCS1YMR038C PPH3P32345 308 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms