RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C ITC1P53125 1264 aa5.45□□□□□ -1.54
SRP40YKR092C NRD1P53617 575 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
SRP40YKR092C YNR040WP53736 256 aa5.45□□□□□ -1.54
SRP40YKR092C GPI13Q07830 1017 aa5.45□□□□□ -1.54
SRP40YKR092C SSN2P38931 1420 aa5.45□□□□□ -1.54
SRP40YKR092C MET4P32389 672 aa5.44□□□□□ -1.54
SRP40YKR092C AIM46P38885 310 aa5.44□□□□□ -1.54
SRP40YKR092C PSY2P40164 858 aa5.44□□□□□ -1.54
SRP40YKR092C YIL165CP40446 119 aa5.44□□□□□ -1.54
SRP40YKR092C CDC55Q00362 526 aa5.44□□□□□ -1.54
SRP40YKR092C RSC4Q02206 625 aa5.44□□□□□ -1.54
SRP40YKR092C EMG1Q06287 252 aaKnown RBP5.44□□□□□ -1.54
SRP40YKR092C MCA1Q08601 432 aa5.44□□□□□ -1.54
SRP40YKR092C TIF6Q12522 245 aaKnown RBP5.44□□□□□ -1.54
SRP40YKR092C HEH2Q03281 663 aa5.43□□□□□ -1.54
SRP40YKR092C POL32P47110 350 aa5.42□□□□□ -1.54
SRP40YKR092C BSC2Q05611 235 aa5.42□□□□□ -1.54
SRP40YKR092C INO80P53115 1489 aa5.41□□□□□ -1.54
SRP40YKR092C ASF1P32447 279 aa5.41□□□□□ -1.54
SRP40YKR092C AMN1P38285 549 aaPredicted RBP5.41□□□□□ -1.54
SRP40YKR092C PRK1P40494 810 aa5.41□□□□□ -1.54
SRP40YKR092C PRY1P47032 299 aa5.41□□□□□ -1.54
SRP40YKR092C SAM37P50110 327 aa5.41□□□□□ -1.54
SRP40YKR092C PHO4P07270 312 aaKnown RBP5.4□□□□□ -1.54
SRP40YKR092C GCD6P32501 712 aaKnown RBP5.4□□□□□ -1.54
SRP40YKR092C PGM2P37012 569 aaKnown RBP5.4□□□□□ -1.54
SRP40YKR092C TAT1P38085 619 aa5.4□□□□□ -1.54
SRP40YKR092C YER156CP40093 338 aaKnown RBP5.4□□□□□ -1.54
SRP40YKR092C ATE1P16639 503 aa5.39□□□□□ -1.55
SRP40YKR092C CAB3P36076 571 aa5.39□□□□□ -1.55
SRP40YKR092C ECM2P38241 364 aaKnown RBP5.39□□□□□ -1.55
SRP40YKR092C ALG14P38242 237 aa5.39□□□□□ -1.55
SRP40YKR092C MGE1P38523 228 aa5.39□□□□□ -1.55
SRP40YKR092C LSB6P42951 607 aa5.39□□□□□ -1.55
SRP40YKR092C RSC2Q06488 889 aa5.39□□□□□ -1.55
SRP40YKR092C NOC3Q07896 663 aaPredicted RBP5.39□□□□□ -1.55
SRP40YKR092C NHA1Q99271 985 aa5.39□□□□□ -1.55
SRP40YKR092C IDI1P15496 288 aa5.38□□□□□ -1.55
SRP40YKR092C VPS35P34110 944 aa5.38□□□□□ -1.55
SRP40YKR092C YHL008CP38750 627 aa5.38□□□□□ -1.55
SRP40YKR092C DAK2P43550 591 aa5.38□□□□□ -1.55
SRP40YKR092C PPT1P53043 513 aa5.38□□□□□ -1.55
SRP40YKR092C CIC1P38779 376 aaKnown RBP5.37□□□□□ -1.55
SRP40YKR092C RRP15Q06511 250 aaPredicted RBP5.37□□□□□ -1.55
SRP40YKR092C INP54Q08227 384 aaKnown RBP5.37□□□□□ -1.55
SRP40YKR092C NAR1P23503 491 aaKnown RBP5.36□□□□□ -1.55
SRP40YKR092C PYC2P32327 1180 aaKnown RBP5.36□□□□□ -1.55
SRP40YKR092C RPT1P33299 467 aaKnown RBP5.36□□□□□ -1.55
SRP40YKR092C EBP2P36049 427 aaKnown RBP5.36□□□□□ -1.55
SRP40YKR092C YJL181WP46987 611 aa5.36□□□□□ -1.55
SRP40YKR092C CTR9P89105 1077 aa5.36□□□□□ -1.55
SRP40YKR092C FLP1P03870 423 aa5.35□□□□□ -1.55
SRP40YKR092C OXR1Q08952 273 aa5.35□□□□□ -1.55
SRP40YKR092C SNU71P53207 620 aaKnown RBP5.34□□□□□ -1.55
SRP40YKR092C BUD9P53226 547 aa5.34□□□□□ -1.55
SRP40YKR092C YPL034WQ03083 165 aa5.34□□□□□ -1.55
SRP40YKR092C GIS4Q04233 774 aa5.34□□□□□ -1.55
SRP40YKR092C YCS4Q06156 1176 aa5.34□□□□□ -1.55
SRP40YKR092C SEC8P32855 1065 aa5.33□□□□□ -1.56
SRP40YKR092C INP51P40559 946 aaKnown RBP5.33□□□□□ -1.56
SRP40YKR092C YJR107WP47145 328 aa5.33□□□□□ -1.56
SRP40YKR092C MRP10O75012 95 aa5.32□□□□□ -1.56
SRP40YKR092C COBP00163 385 aa5.32□□□□□ -1.56
SRP40YKR092C FUS1P11710 512 aa5.32□□□□□ -1.56
SRP40YKR092C MNN4P36044 1178 aa5.32□□□□□ -1.56
SRP40YKR092C OYE2Q03558 400 aaKnown RBP5.32□□□□□ -1.56
SRP40YKR092C DUR3P33413 735 aa5.31□□□□□ -1.56
SRP40YKR092C NUT1P53114 1132 aa5.31□□□□□ -1.56
SRP40YKR092C MON1P53129 644 aa5.31□□□□□ -1.56
SRP40YKR092C BIO5P53744 561 aaKnown RBP5.31□□□□□ -1.56
SRP40YKR092C DAL4Q04895 635 aa5.31□□□□□ -1.56
SRP40YKR092C GAS5Q08193 484 aa5.31□□□□□ -1.56
SRP40YKR092C RVS167P39743 482 aaKnown RBP5.3□□□□□ -1.56
SRP40YKR092C YFR016CP43597 1233 aaKnown RBP5.3□□□□□ -1.56
SRP40YKR092C ALD3P54114 506 aa5.3□□□□□ -1.56
SRP40YKR092C MSH6Q03834 1242 aa5.3□□□□□ -1.56
SRP40YKR092C MCM2P29469 868 aa5.29□□□□□ -1.56
SRP40YKR092C RRM3P38766 723 aa5.29□□□□□ -1.56
SRP40YKR092C RPS0BP46654 252 aaKnown RBP5.29□□□□□ -1.56
SRP40YKR092C SOG2Q08817 791 aa5.29□□□□□ -1.56
SRP40YKR092C GLO4Q12320 285 aa5.29□□□□□ -1.56
SRP40YKR092C KAR2P16474 682 aaKnown RBP5.28□□□□□ -1.56
SRP40YKR092C NPR1P22211 790 aa5.28□□□□□ -1.56
SRP40YKR092C MCM5P29496 775 aaKnown RBP5.28□□□□□ -1.56
SRP40YKR092C PRP40P33203 583 aaKnown RBP5.28□□□□□ -1.56
SRP40YKR092C TFA2P36145 328 aa5.28□□□□□ -1.56
SRP40YKR092C RIM11P38615 370 aa5.28□□□□□ -1.56
SRP40YKR092C RPS26AP39938 119 aaKnown RBP5.28□□□□□ -1.56
SRP40YKR092C RPS26BP39939 119 aaKnown RBP5.28□□□□□ -1.56
SRP40YKR092C FYV10P40492 516 aa5.28□□□□□ -1.56
SRP40YKR092C SAP155P43612 1002 aa5.28□□□□□ -1.56
SRP40YKR092C YJR124CP47159 448 aa5.28□□□□□ -1.56
SRP40YKR092C TOS4Q06266 489 aa5.28□□□□□ -1.56
SRP40YKR092C PMT7Q06644 662 aa5.28□□□□□ -1.56
SRP40YKR092C AI3P03877 415 aa5.27□□□□□ -1.57
SRP40YKR092C HXK1P04806 485 aaKnown RBP5.27□□□□□ -1.57
SRP40YKR092C MAC1P35192 417 aa5.27□□□□□ -1.57
SRP40YKR092C GUP1P53154 560 aa5.27□□□□□ -1.57
SRP40YKR092C YGR122WP53272 402 aa5.27□□□□□ -1.57
SRP40YKR092C SOK2P53438 785 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 58.3 ms