RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C SUT1P53032 299 aaKnown RBP2.57□□□□□ -2
TRL1YJL087C GCR2Q01722 534 aa2.57□□□□□ -2
TRL1YJL087C FOX2Q02207 900 aaKnown RBP2.57□□□□□ -2
TRL1YJL087C YPL062WQ02781 134 aa2.57□□□□□ -2
TRL1YJL087C ECM16Q04217 1267 aaKnown RBP2.57□□□□□ -2
TRL1YJL087C BSC2Q05611 235 aa2.57□□□□□ -2
TRL1YJL087C CCP1P00431 361 aa2.56□□□□□ -2
TRL1YJL087C MOD5P07884 428 aa2.56□□□□□ -2
TRL1YJL087C ERR1P0CX10 437 aa2.56□□□□□ -2
TRL1YJL087C ERR2P0CX11 437 aa2.56□□□□□ -2
TRL1YJL087C RPL8AP17076 256 aaKnown RBP2.56□□□□□ -2
TRL1YJL087C KIP2P28743 706 aa2.56□□□□□ -2
TRL1YJL087C THI4P32318 326 aa2.56□□□□□ -2
TRL1YJL087C YHL008CP38750 627 aa2.56□□□□□ -2
TRL1YJL087C MDG1P53885 366 aa2.56□□□□□ -2
TRL1YJL087C SVL3Q03088 825 aaKnown RBP2.56□□□□□ -2
TRL1YJL087C DAL4Q04895 635 aa2.56□□□□□ -2
TRL1YJL087C YCS4Q06156 1176 aa2.56□□□□□ -2
TRL1YJL087C YOR378WQ08902 515 aa2.56□□□□□ -2
TRL1YJL087C CAN1P04817 590 aa2.56□□□□□ -2
TRL1YJL087C GCR1P07261 785 aa2.56□□□□□ -2
TRL1YJL087C AMS1P22855 1083 aa2.56□□□□□ -2
TRL1YJL087C VMA3P25515 160 aa2.56□□□□□ -2
TRL1YJL087C CDC11P32458 415 aa2.56□□□□□ -2
TRL1YJL087C SMC1P32908 1225 aa2.56□□□□□ -2
TRL1YJL087C PIC2P40035 300 aa2.56□□□□□ -2
TRL1YJL087C HXT8P40886 569 aa2.56□□□□□ -2
TRL1YJL087C YPL109CQ02981 657 aa2.56□□□□□ -2
TRL1YJL087C INP54Q08227 384 aaKnown RBP2.56□□□□□ -2
TRL1YJL087C RPA135P22138 1203 aaKnown RBP2.55□□□□□ -2
TRL1YJL087C FUI1P38196 639 aa2.55□□□□□ -2
TRL1YJL087C YBR184WP38299 523 aa2.55□□□□□ -2
TRL1YJL087C RGD2P43556 714 aa2.55□□□□□ -2
TRL1YJL087C ISU1Q03020 165 aa2.55□□□□□ -2
TRL1YJL087C YPQ2Q06328 317 aa2.55□□□□□ -2
TRL1YJL087C BRE1Q07457 700 aaKnown RBP2.55□□□□□ -2
TRL1YJL087C GAL11P19659 1081 aa2.54□□□□□ -2
TRL1YJL087C MSH2P25847 964 aa2.54□□□□□ -2
TRL1YJL087C RPL8BP29453 256 aaKnown RBP2.54□□□□□ -2
TRL1YJL087C UGA4P32837 571 aa2.54□□□□□ -2
TRL1YJL087C PRP40P33203 583 aaKnown RBP2.54□□□□□ -2
TRL1YJL087C RRD1P40454 393 aaKnown RBP2.54□□□□□ -2
TRL1YJL087C EMW1P42842 904 aaKnown RBP2.54□□□□□ -2
TRL1YJL087C EEB1Q02891 456 aa2.54□□□□□ -2
TRL1YJL087C RTT10Q08924 1013 aa2.54□□□□□ -2
TRL1YJL087C FLP1P03870 423 aa2.54□□□□□ -2
TRL1YJL087C TRX2P22803 104 aaKnown RBP2.54□□□□□ -2
TRL1YJL087C GGA2P38817 585 aaKnown RBP2.54□□□□□ -2
TRL1YJL087C NTA1P40354 457 aa2.54□□□□□ -2
TRL1YJL087C YJR115WP47152 169 aa2.54□□□□□ -2
TRL1YJL087C YGR125WP53273 1036 aa2.54□□□□□ -2
TRL1YJL087C HST3P53687 447 aa2.54□□□□□ -2
TRL1YJL087C CTR9P89105 1077 aa2.54□□□□□ -2
TRL1YJL087C FRK1Q03002 865 aaPredicted RBP2.54□□□□□ -2
TRL1YJL087C CEF1Q03654 590 aaPredicted RBP2.54□□□□□ -2
TRL1YJL087C ADI1Q03677 179 aa2.54□□□□□ -2
TRL1YJL087C TMA64Q04600 565 aaKnown RBP2.54□□□□□ -2
TRL1YJL087C ADR1P07248 1323 aa2.54□□□□□ -2
TRL1YJL087C MCM1P11746 286 aa2.53□□□□□ -2
TRL1YJL087C GBP2P25555 427 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
TRL1YJL087C MCM5P29496 775 aaKnown RBP2.53□□□□□ -2
TRL1YJL087C ULP1Q02724 621 aa2.53□□□□□ -2
TRL1YJL087C SYH1Q02875 849 aaKnown RBP2.53□□□□□ -2
TRL1YJL087C SPO75Q07798 868 aa2.53□□□□□ -2
TRL1YJL087C NTG2Q08214 380 aa2.53□□□□□ -2
TRL1YJL087C SLX4Q12098 748 aa2.53□□□□□ -2
TRL1YJL087C NKP1Q12493 238 aa2.53□□□□□ -2
TRL1YJL087C CIT1P00890 479 aa2.53□□□□□ -2
TRL1YJL087C MSN1P22148 382 aa2.53□□□□□ -2
TRL1YJL087C UTR2P32623 467 aa2.53□□□□□ -2
TRL1YJL087C SCD5P34758 872 aa2.53□□□□□ -2
TRL1YJL087C RAD55P38953 406 aa2.53□□□□□ -2
TRL1YJL087C IES5P40060 125 aa2.53□□□□□ -2
TRL1YJL087C PFD1P46988 109 aa2.53□□□□□ -2
TRL1YJL087C GNP1P48813 663 aa2.53□□□□□ -2
TRL1YJL087C YGR021WP53212 290 aa2.53□□□□□ -2
TRL1YJL087C ESC2Q06340 456 aa2.53□□□□□ -2
TRL1YJL087C ATG13Q06628 738 aa2.53□□□□□ -2
TRL1YJL087C FAL1Q12099 399 aaKnown RBP2.53□□□□□ -2
TRL1YJL087C TIF6Q12522 245 aaKnown RBP2.53□□□□□ -2
TRL1YJL087C THS1P04801 734 aaKnown RBP2.52□□□□□ -2.01
TRL1YJL087C FBP26P32604 452 aa2.52□□□□□ -2.01
TRL1YJL087C DUR3P33413 735 aa2.52□□□□□ -2.01
TRL1YJL087C IRS4P36115 615 aaKnown RBP2.52□□□□□ -2.01
TRL1YJL087C ERP2P39704 215 aa2.52□□□□□ -2.01
TRL1YJL087C PSY2P40164 858 aa2.52□□□□□ -2.01
TRL1YJL087C IRR1P40541 1150 aa2.52□□□□□ -2.01
TRL1YJL087C TY4A-JP47023 414 aa2.52□□□□□ -2.01
TRL1YJL087C YJR120WP47157 116 aa2.52□□□□□ -2.01
TRL1YJL087C MAL11P53048 616 aa2.52□□□□□ -2.01
TRL1YJL087C TGL2P54857 326 aa2.52□□□□□ -2.01
TRL1YJL087C TAF8Q03750 510 aa2.52□□□□□ -2.01
TRL1YJL087C SHE9Q04172 456 aa2.52□□□□□ -2.01
TRL1YJL087C YDR344CQ05510 147 aa2.52□□□□□ -2.01
TRL1YJL087C FMP25Q08023 583 aa2.52□□□□□ -2.01
TRL1YJL087C TMA46Q12000 345 aaKnown RBP2.52□□□□□ -2.01
TRL1YJL087C TMA17Q12513 150 aa2.52□□□□□ -2.01
TRL1YJL087C SRF1Q12516 437 aa2.52□□□□□ -2.01
TRL1YJL087C COBP00163 385 aa2.52□□□□□ -2.01
TRL1YJL087C ATP4P05626 244 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms