RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C AGE1Q04412 482 aa2.48□□□□□ -2.01
RTT101YJL047C SRF1Q12516 437 aa2.48□□□□□ -2.01
RTT101YJL047C TMA7Q3E764 64 aaKnown RBP2.48□□□□□ -2.01
RTT101YJL047C CYT1P07143 309 aa2.47□□□□□ -2.01
RTT101YJL047C IXR1P33417 597 aa2.47□□□□□ -2.01
RTT101YJL047C YKL222CP35995 705 aa2.47□□□□□ -2.01
RTT101YJL047C GPP1P41277 250 aaKnown RBP2.47□□□□□ -2.01
RTT101YJL047C SAM37P50110 327 aa2.47□□□□□ -2.01
RTT101YJL047C RTA1P53047 317 aa2.47□□□□□ -2.01
RTT101YJL047C YGR125WP53273 1036 aa2.47□□□□□ -2.01
RTT101YJL047C CDC55Q00362 526 aa2.47□□□□□ -2.01
RTT101YJL047C VMS1Q04311 632 aaKnown RBP2.47□□□□□ -2.01
RTT101YJL047C CAN1P04817 590 aa2.47□□□□□ -2.01
RTT101YJL047C RPP1BP10622 106 aaKnown RBP2.47□□□□□ -2.01
RTT101YJL047C YEF3P16521 1044 aaKnown RBP2.47□□□□□ -2.01
RTT101YJL047C BAS1P22035 811 aa2.47□□□□□ -2.01
RTT101YJL047C PRE9P23638 258 aaKnown RBP2.47□□□□□ -2.01
RTT101YJL047C MSH2P25847 964 aa2.47□□□□□ -2.01
RTT101YJL047C UGA4P32837 571 aa2.47□□□□□ -2.01
RTT101YJL047C NTH2P35172 780 aa2.47□□□□□ -2.01
RTT101YJL047C YBR184WP38299 523 aa2.47□□□□□ -2.01
RTT101YJL047C IES1P43579 692 aa2.47□□□□□ -2.01
RTT101YJL047C YGR237CP50089 785 aa2.47□□□□□ -2.01
RTT101YJL047C SUT1P53032 299 aaKnown RBP2.47□□□□□ -2.01
RTT101YJL047C GPG1P53130 126 aa2.47□□□□□ -2.01
RTT101YJL047C COG6P53959 839 aa2.47□□□□□ -2.01
RTT101YJL047C YNL034WP53963 612 aa2.47□□□□□ -2.01
RTT101YJL047C YNL018CP53976 612 aa2.47□□□□□ -2.01
RTT101YJL047C ISR1Q06098 443 aaKnown RBP2.47□□□□□ -2.01
RTT101YJL047C FAL1Q12099 399 aaKnown RBP2.47□□□□□ -2.01
RTT101YJL047C NYV1Q12255 253 aa2.47□□□□□ -2.01
RTT101YJL047C MPD2Q99316 277 aa2.47□□□□□ -2.01
RTT101YJL047C KIP2P28743 706 aa2.46□□□□□ -2.01
RTT101YJL047C RPS0AP32905 252 aaKnown RBP2.46□□□□□ -2.01
RTT101YJL047C MTC2P34246 357 aa2.46□□□□□ -2.01
RTT101YJL047C ARH1P48360 493 aa2.46□□□□□ -2.01
RTT101YJL047C NMA111P53920 997 aa2.46□□□□□ -2.01
RTT101YJL047C YNL011CP53980 444 aa2.46□□□□□ -2.01
RTT101YJL047C ALO1P54783 526 aaKnown RBP2.46□□□□□ -2.01
RTT101YJL047C MDM1Q01846 1127 aa2.46□□□□□ -2.01
RTT101YJL047C EEB1Q02891 456 aa2.46□□□□□ -2.01
RTT101YJL047C TFB2Q02939 513 aa2.46□□□□□ -2.01
RTT101YJL047C DAL4Q04895 635 aa2.46□□□□□ -2.01
RTT101YJL047C DPL1Q05567 589 aa2.46□□□□□ -2.01
RTT101YJL047C HDA3Q06623 655 aa2.46□□□□□ -2.01
RTT101YJL047C OXR1Q08952 273 aa2.46□□□□□ -2.01
RTT101YJL047C PGI1P12709 554 aaKnown RBP2.46□□□□□ -2.02
RTT101YJL047C DPB3P27344 201 aa2.46□□□□□ -2.02
RTT101YJL047C NUD1P32336 851 aa2.46□□□□□ -2.02
RTT101YJL047C NGR1P32831 672 aaKnown RBP2.46□□□□□ -2.02
RTT101YJL047C YAP1801P38856 637 aa2.46□□□□□ -2.02
RTT101YJL047C NOC3Q07896 663 aaPredicted RBP2.46□□□□□ -2.02
RTT101YJL047C ATP4P05626 244 aa2.45□□□□□ -2.02
RTT101YJL047C RPS6AP0CX37 236 aaKnown RBP2.45□□□□□ -2.02
RTT101YJL047C RPS6BP0CX38 236 aaPredicted RBP2.45□□□□□ -2.02
RTT101YJL047C RPL8BP29453 256 aaKnown RBP2.45□□□□□ -2.02
RTT101YJL047C EXO84P38261 753 aa2.45□□□□□ -2.02
RTT101YJL047C PFD1P46988 109 aa2.45□□□□□ -2.02
RTT101YJL047C YJR115WP47152 169 aa2.45□□□□□ -2.02
RTT101YJL047C RPA14P50106 137 aa2.45□□□□□ -2.02
RTT101YJL047C CWH41P53008 833 aa2.45□□□□□ -2.02
RTT101YJL047C MAL11P53048 616 aa2.45□□□□□ -2.02
RTT101YJL047C RLP24Q07915 199 aaKnown RBP2.45□□□□□ -2.02
RTT101YJL047C FMP25Q08023 583 aa2.45□□□□□ -2.02
RTT101YJL047C PSK2Q08217 1101 aa2.45□□□□□ -2.02
RTT101YJL047C REC8Q12188 680 aa2.45□□□□□ -2.02
RTT101YJL047C NUP145P49687 1317 aa2.45□□□□□ -2.02
RTT101YJL047C GCR1P07261 785 aa2.45□□□□□ -2.02
RTT101YJL047C TAF13P11747 167 aa2.45□□□□□ -2.02
RTT101YJL047C OPI1P21957 404 aa2.45□□□□□ -2.02
RTT101YJL047C NPR1P22211 790 aa2.45□□□□□ -2.02
RTT101YJL047C PUF4P25339 888 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
RTT101YJL047C BLI1P35727 113 aa2.45□□□□□ -2.02
RTT101YJL047C BET3P36149 193 aa2.45□□□□□ -2.02
RTT101YJL047C PIC2P40035 300 aa2.45□□□□□ -2.02
RTT101YJL047C MRPS18P42847 217 aa2.45□□□□□ -2.02
RTT101YJL047C YFL034WP43564 1073 aa2.45□□□□□ -2.02
RTT101YJL047C SPC105P53148 917 aa2.45□□□□□ -2.02
RTT101YJL047C UBX4P54730 416 aa2.45□□□□□ -2.02
RTT101YJL047C MEH1Q02205 184 aa2.45□□□□□ -2.02
RTT101YJL047C YPR097WQ06839 1073 aa2.45□□□□□ -2.02
RTT101YJL047C RRI2Q12348 645 aa2.45□□□□□ -2.02
RTT101YJL047C FOB1O13329 566 aa2.44□□□□□ -2.02
RTT101YJL047C TY1A-DR4O74302 440 aa2.44□□□□□ -2.02
RTT101YJL047C TY1A-HP0C2I4 478 aaKnown RBP2.44□□□□□ -2.02
RTT101YJL047C TY1A-AP0CX57 440 aa2.44□□□□□ -2.02
RTT101YJL047C TY1A-PR1P0CX58 440 aa2.44□□□□□ -2.02
RTT101YJL047C TY1A-ORP0CX59 440 aa2.44□□□□□ -2.02
RTT101YJL047C TY1A-PR2P0CX60 440 aa2.44□□□□□ -2.02
RTT101YJL047C TY1A-DR5P0CX65 440 aa2.44□□□□□ -2.02
RTT101YJL047C TY1A-ER2P0CX66 440 aa2.44□□□□□ -2.02
RTT101YJL047C TY1A-GR3P0CX67 440 aa2.44□□□□□ -2.02
RTT101YJL047C TY1A-LR1P0CX68 440 aa2.44□□□□□ -2.02
RTT101YJL047C TY1A-MR2P0CX69 440 aa2.44□□□□□ -2.02
RTT101YJL047C SST2P11972 698 aaKnown RBP2.44□□□□□ -2.02
RTT101YJL047C SEC2P17065 759 aa2.44□□□□□ -2.02
RTT101YJL047C MEF1P25039 761 aa2.44□□□□□ -2.02
RTT101YJL047C MCM5P29496 775 aaKnown RBP2.44□□□□□ -2.02
RTT101YJL047C SFP1P32432 683 aa2.44□□□□□ -2.02
RTT101YJL047C CIC1P38779 376 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms