RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C PAN5P38787 379 aa5.29□□□□□ -1.56
TPM2YIL138C HXT8P40886 569 aa5.29□□□□□ -1.56
TPM2YIL138C CWC15Q03772 175 aaKnown RBP5.29□□□□□ -1.56
TPM2YIL138C EMG1Q06287 252 aaKnown RBP5.29□□□□□ -1.56
TPM2YIL138C BRE4Q07660 1125 aa5.29□□□□□ -1.56
TPM2YIL138C SSA4P22202 642 aaKnown RBP5.28□□□□□ -1.56
TPM2YIL138C AIM46P38885 310 aa5.28□□□□□ -1.56
TPM2YIL138C BIO5P53744 561 aaKnown RBP5.28□□□□□ -1.56
TPM2YIL138C CYC7P00045 113 aa5.27□□□□□ -1.57
TPM2YIL138C FUS1P11710 512 aa5.27□□□□□ -1.57
TPM2YIL138C RRN6P32786 894 aa5.27□□□□□ -1.57
TPM2YIL138C YML083CQ04526 418 aa5.27□□□□□ -1.57
TPM2YIL138C SEA4P38164 1038 aa5.26□□□□□ -1.57
TPM2YIL138C ALD3P54114 506 aa5.26□□□□□ -1.57
TPM2YIL138C MAG2Q06436 670 aaKnown RBP5.26□□□□□ -1.57
TPM2YIL138C APC11Q12157 165 aa5.26□□□□□ -1.57
TPM2YIL138C MAE1P36013 669 aaKnown RBP5.25□□□□□ -1.57
TPM2YIL138C NTA1P40354 457 aa5.25□□□□□ -1.57
TPM2YIL138C SPO74P45819 413 aa5.25□□□□□ -1.57
TPM2YIL138C SPO71Q03868 1245 aa5.25□□□□□ -1.57
TPM2YIL138C PNP1Q05788 311 aa5.25□□□□□ -1.57
TPM2YIL138C KTR2P33550 425 aa5.24□□□□□ -1.57
TPM2YIL138C POL5P39985 1022 aaKnown RBP5.24□□□□□ -1.57
TPM2YIL138C RGD2P43556 714 aa5.24□□□□□ -1.57
TPM2YIL138C MSB1P21339 1137 aaKnown RBP5.23□□□□□ -1.57
TPM2YIL138C SDH1Q00711 640 aa5.23□□□□□ -1.57
TPM2YIL138C AOS1Q06624 347 aa5.23□□□□□ -1.57
TPM2YIL138C SMC1P32908 1225 aa5.22□□□□□ -1.57
TPM2YIL138C BOI1P38041 980 aaKnown RBP5.22□□□□□ -1.57
TPM2YIL138C SUT1P53032 299 aaKnown RBP5.22□□□□□ -1.57
TPM2YIL138C NCE103P53615 221 aa5.22□□□□□ -1.57
TPM2YIL138C ELG1Q12050 791 aa5.22□□□□□ -1.57
TPM2YIL138C ERS1P17261 260 aa5.21□□□□□ -1.58
TPM2YIL138C RNQ1P25367 405 aa5.21□□□□□ -1.58
TPM2YIL138C RAD55P38953 406 aa5.21□□□□□ -1.58
TPM2YIL138C NOB1Q08444 459 aaKnown RBP5.21□□□□□ -1.58
TPM2YIL138C LSO1Q3E827 93 aa5.21□□□□□ -1.58
TPM2YIL138C RPB10P22139 70 aa5.2□□□□□ -1.58
TPM2YIL138C ELM1P32801 640 aa5.2□□□□□ -1.58
TPM2YIL138C IRS4P36115 615 aaKnown RBP5.2□□□□□ -1.58
TPM2YIL138C NEO1P40527 1151 aa5.2□□□□□ -1.58
TPM2YIL138C KIP3P53086 805 aaKnown RBP5.19□□□□□ -1.58
TPM2YIL138C TIF6Q12522 245 aaKnown RBP5.19□□□□□ -1.58
TPM2YIL138C GCD1P09032 578 aaPredicted RBP5.18□□□□□ -1.58
TPM2YIL138C HVG1P0CE11 249 aa5.18□□□□□ -1.58
TPM2YIL138C LRG1P35688 1017 aa5.18□□□□□ -1.58
TPM2YIL138C PSY2P40164 858 aa5.18□□□□□ -1.58
TPM2YIL138C YJR124CP47159 448 aa5.18□□□□□ -1.58
TPM2YIL138C YNR065CP53751 1116 aa5.18□□□□□ -1.58
TPM2YIL138C FAR11P53917 953 aa5.18□□□□□ -1.58
TPM2YIL138C GLO4Q12320 285 aa5.18□□□□□ -1.58
TPM2YIL138C FUR4P05316 633 aaKnown RBP5.17□□□□□ -1.58
TPM2YIL138C HAS1Q03532 505 aaKnown RBP5.17□□□□□ -1.58
TPM2YIL138C GIC2Q06648 383 aa5.17□□□□□ -1.58
TPM2YIL138C SEG2P34250 1132 aa5.16□□□□□ -1.58
TPM2YIL138C FET4P40988 552 aa5.16□□□□□ -1.58
TPM2YIL138C PYC2P32327 1180 aaKnown RBP5.14□□□□□ -1.59
TPM2YIL138C YOR223WQ12015 292 aa5.14□□□□□ -1.59
TPM2YIL138C YLL054CQ12244 843 aa5.14□□□□□ -1.59
TPM2YIL138C POL12P38121 705 aaPredicted RBP5.13□□□□□ -1.59
TPM2YIL138C NSI1Q12457 570 aa5.13□□□□□ -1.59
TPM2YIL138C WHI3P34761 661 aaKnown RBP5.12□□□□□ -1.59
TPM2YIL138C UBP5P39944 805 aa5.12□□□□□ -1.59
TPM2YIL138C MMM1P41800 426 aa5.12□□□□□ -1.59
TPM2YIL138C YMR074CQ04773 145 aa5.12□□□□□ -1.59
TPM2YIL138C BOL3P39724 118 aa5.11□□□□□ -1.59
TPM2YIL138C YOR059CQ08448 450 aaKnown RBP5.11□□□□□ -1.59
TPM2YIL138C GPT2P36148 743 aa5.1□□□□□ -1.59
TPM2YIL138C CIT3P43635 486 aa5.1□□□□□ -1.59
TPM2YIL138C ECL1P48235 211 aa5.1□□□□□ -1.59
TPM2YIL138C GCV1P48015 400 aa5.09□□□□□ -1.59
TPM2YIL138C UFD2P54860 961 aa5.09□□□□□ -1.59
TPM2YIL138C NIT1P40447 199 aa5.08□□□□□ -1.6
TPM2YIL138C CTR9P89105 1077 aa5.08□□□□□ -1.6
TPM2YIL138C YIG1Q08956 461 aa5.08□□□□□ -1.6
TPM2YIL138C ECM2P38241 364 aaKnown RBP5.07□□□□□ -1.6
TPM2YIL138C RSC4Q02206 625 aa5.07□□□□□ -1.6
TPM2YIL138C DOT1Q04089 582 aaKnown RBP5.07□□□□□ -1.6
TPM2YIL138C SUB2Q07478 446 aaKnown RBP5.07□□□□□ -1.6
TPM2YIL138C DFG16Q99234 619 aa5.07□□□□□ -1.6
TPM2YIL138C RIM11P38615 370 aa5.06□□□□□ -1.6
TPM2YIL138C HTS1P07263 546 aaKnown RBP5.05□□□□□ -1.6
TPM2YIL138C PRP5P21372 849 aaPredicted RBP5.05□□□□□ -1.6
TPM2YIL138C GAS1P22146 559 aaKnown RBP5.05□□□□□ -1.6
TPM2YIL138C NPR1P22211 790 aa5.05□□□□□ -1.6
TPM2YIL138C YHL008CP38750 627 aa5.05□□□□□ -1.6
TPM2YIL138C RCM1P53972 490 aa5.05□□□□□ -1.6
TPM2YIL138C COBP00163 385 aa5.04□□□□□ -1.6
TPM2YIL138C DUR3P33413 735 aa5.04□□□□□ -1.6
TPM2YIL138C GLO3P38682 493 aaKnown RBP5.04□□□□□ -1.6
TPM2YIL138C MEC3Q02574 474 aa5.04□□□□□ -1.6
TPM2YIL138C KAR5Q04746 504 aa5.04□□□□□ -1.6
TPM2YIL138C CMR1Q12510 522 aaKnown RBP5.04□□□□□ -1.6
TPM2YIL138C QDR1P40475 563 aa5.03□□□□□ -1.6
TPM2YIL138C ATG1P53104 897 aa5.03□□□□□ -1.6
TPM2YIL138C PRP43P53131 767 aaKnown RBP5.03□□□□□ -1.6
TPM2YIL138C MSH6Q03834 1242 aa5.03□□□□□ -1.6
TPM2YIL138C HSP78P33416 811 aa5.02□□□□□ -1.61
TPM2YIL138C ACF4P47129 309 aa5.02□□□□□ -1.61
TPM2YIL138C UTP22P53254 1237 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms