RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W RPC31P17890 251 aa5.05□□□□□ -1.6
UBP6YFR010W KAP122P32767 1081 aa5.05□□□□□ -1.6
UBP6YFR010W MFT1P33441 392 aaKnown RBP5.05□□□□□ -1.6
UBP6YFR010W QDR2P40474 542 aa5.05□□□□□ -1.6
UBP6YFR010W SKP1P52286 194 aa5.05□□□□□ -1.6
UBP6YFR010W CUS1Q02554 436 aaPredicted RBP5.05□□□□□ -1.6
UBP6YFR010W ECM16Q04217 1267 aaKnown RBP5.05□□□□□ -1.6
UBP6YFR010W PUN1Q06991 263 aa5.05□□□□□ -1.6
UBP6YFR010W NHA1Q99271 985 aa5.05□□□□□ -1.6
UBP6YFR010W CIT2P08679 460 aa5.04□□□□□ -1.6
UBP6YFR010W DAL5P15365 543 aa5.04□□□□□ -1.6
UBP6YFR010W ATE1P16639 503 aa5.04□□□□□ -1.6
UBP6YFR010W MRPL33P20084 86 aa5.04□□□□□ -1.6
UBP6YFR010W GRX4P32642 244 aa5.04□□□□□ -1.6
UBP6YFR010W YBR197CP38306 217 aa5.04□□□□□ -1.6
UBP6YFR010W DNM1P54861 757 aa5.04□□□□□ -1.6
UBP6YFR010W MAG2Q06436 670 aaKnown RBP5.04□□□□□ -1.6
UBP6YFR010W TAF13P11747 167 aa5.03□□□□□ -1.6
UBP6YFR010W KAR1P11927 433 aa5.03□□□□□ -1.6
UBP6YFR010W TPS3P38426 1054 aaKnown RBP5.03□□□□□ -1.6
UBP6YFR010W CWC15Q03772 175 aaKnown RBP5.03□□□□□ -1.6
UBP6YFR010W SRS2P12954 1174 aa5.02□□□□□ -1.61
UBP6YFR010W PDC5P16467 563 aaKnown RBP5.02□□□□□ -1.61
UBP6YFR010W KNS1P32350 737 aaPredicted RBP5.02□□□□□ -1.61
UBP6YFR010W ISC10P32645 267 aa5.02□□□□□ -1.61
UBP6YFR010W SBE2P42223 864 aaKnown RBP5.02□□□□□ -1.61
UBP6YFR010W POL32P47110 350 aa5.02□□□□□ -1.61
UBP6YFR010W OYE2Q03558 400 aaKnown RBP5.02□□□□□ -1.61
UBP6YFR010W POB3Q04636 552 aaKnown RBP5.02□□□□□ -1.61
UBP6YFR010W MSC6Q08818 692 aaKnown RBP5.02□□□□□ -1.61
UBP6YFR010W NKP1Q12493 238 aa5.02□□□□□ -1.61
UBP6YFR010W YBL113CQ7M4S9 792 aa5.02□□□□□ -1.61
UBP6YFR010W VMA3P25515 160 aa5.02□□□□□ -1.61
UBP6YFR010W SRP40P32583 406 aaPredicted RBP5.02□□□□□ -1.61
UBP6YFR010W NCL1P38205 684 aaKnown RBP5.02□□□□□ -1.61
UBP6YFR010W CEF1Q03654 590 aaPredicted RBP5.02□□□□□ -1.61
UBP6YFR010W COG4Q06096 861 aa5.02□□□□□ -1.61
UBP6YFR010W SSF2Q12153 453 aaPredicted RBP5.02□□□□□ -1.61
UBP6YFR010W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
UBP6YFR010W YKL091CP33324 310 aaKnown RBP5.01□□□□□ -1.61
UBP6YFR010W HOS4P40480 1083 aa5.01□□□□□ -1.61
UBP6YFR010W IOC3P43596 787 aa5.01□□□□□ -1.61
UBP6YFR010W ESF2P53743 316 aaKnown RBP5.01□□□□□ -1.61
UBP6YFR010W YMR187CQ03236 431 aa5.01□□□□□ -1.61
UBP6YFR010W HEH2Q03281 663 aa5.01□□□□□ -1.61
UBP6YFR010W JIP5Q06214 492 aaPredicted RBP5.01□□□□□ -1.61
UBP6YFR010W APM2P38700 605 aa5□□□□□ -1.61
UBP6YFR010W DYS1P38791 387 aa5□□□□□ -1.61
UBP6YFR010W YGL081WP53156 320 aa5□□□□□ -1.61
UBP6YFR010W UBP3Q01477 912 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
UBP6YFR010W MEH1Q02205 184 aa5□□□□□ -1.61
UBP6YFR010W NSE3Q05541 303 aa5□□□□□ -1.61
UBP6YFR010W PNP1Q05788 311 aa5□□□□□ -1.61
UBP6YFR010W TDA6Q06466 467 aa5□□□□□ -1.61
UBP6YFR010W PWP2P25635 923 aaKnown RBP4.99□□□□□ -1.61
UBP6YFR010W NAB2P32505 525 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
UBP6YFR010W SEC8P32855 1065 aa4.99□□□□□ -1.61
UBP6YFR010W BSD2P38356 321 aa4.99□□□□□ -1.61
UBP6YFR010W SKN7P38889 622 aa4.99□□□□□ -1.61
UBP6YFR010W IES1P43579 692 aa4.99□□□□□ -1.61
UBP6YFR010W YNR014WP53719 212 aa4.99□□□□□ -1.61
UBP6YFR010W YNR040WP53736 256 aa4.99□□□□□ -1.61
UBP6YFR010W YOR296WQ08748 1289 aa4.99□□□□□ -1.61
UBP6YFR010W SEC6P32844 805 aa4.98□□□□□ -1.61
UBP6YFR010W NFU1P32860 256 aa4.98□□□□□ -1.61
UBP6YFR010W BLI1P35727 113 aa4.98□□□□□ -1.61
UBP6YFR010W VPS24P36095 224 aaKnown RBP4.98□□□□□ -1.61
UBP6YFR010W ENP1P38333 483 aaKnown RBP4.98□□□□□ -1.61
UBP6YFR010W ERP5P38819 212 aa4.98□□□□□ -1.61
UBP6YFR010W PRK1P40494 810 aa4.98□□□□□ -1.61
UBP6YFR010W KAR5Q04746 504 aa4.98□□□□□ -1.61
UBP6YFR010W ENT2Q05785 613 aa4.98□□□□□ -1.61
UBP6YFR010W ERP4Q12450 207 aa4.98□□□□□ -1.61
UBP6YFR010W LDH1P38139 375 aa4.97□□□□□ -1.61
UBP6YFR010W FUI1P38196 639 aa4.97□□□□□ -1.61
UBP6YFR010W VAC8P39968 578 aa4.97□□□□□ -1.61
UBP6YFR010W ITC1P53125 1264 aa4.97□□□□□ -1.61
UBP6YFR010W SVL3Q03088 825 aaKnown RBP4.97□□□□□ -1.61
UBP6YFR010W PSK2Q08217 1101 aa4.97□□□□□ -1.61
UBP6YFR010W IDI1P15496 288 aa4.97□□□□□ -1.61
UBP6YFR010W CAB3P36076 571 aa4.97□□□□□ -1.61
UBP6YFR010W GRX7P38068 203 aa4.97□□□□□ -1.61
UBP6YFR010W MGE1P38523 228 aa4.97□□□□□ -1.61
UBP6YFR010W ALD3P54114 506 aa4.97□□□□□ -1.61
UBP6YFR010W RPN4Q03465 531 aa4.97□□□□□ -1.61
UBP6YFR010W YGR161W-CQ3E744 92 aa4.97□□□□□ -1.61
UBP6YFR010W THS1P04801 734 aaKnown RBP4.96□□□□□ -1.62
UBP6YFR010W KTR2P33550 425 aa4.96□□□□□ -1.62
UBP6YFR010W DEF1P35732 738 aaKnown RBP4.96□□□□□ -1.62
UBP6YFR010W BOI1P38041 980 aaKnown RBP4.96□□□□□ -1.62
UBP6YFR010W GIP1P38229 639 aa4.96□□□□□ -1.62
UBP6YFR010W PPX1P38698 397 aa4.96□□□□□ -1.62
UBP6YFR010W YHL050CP38721 697 aa4.96□□□□□ -1.62
UBP6YFR010W YHR219WP38900 624 aa4.96□□□□□ -1.62
UBP6YFR010W BUD6P41697 788 aa4.96□□□□□ -1.62
UBP6YFR010W WHI5Q12416 295 aa4.96□□□□□ -1.62
UBP6YFR010W OPI1P21957 404 aa4.95□□□□□ -1.62
UBP6YFR010W RPB10P22139 70 aa4.95□□□□□ -1.62
UBP6YFR010W MSN1P22148 382 aa4.95□□□□□ -1.62
UBP6YFR010W TRX2P22803 104 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 64.6 ms