RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	YMR265C	Q03508	461 aa	Known RBP	4.93	□□□□□ -1.62
PMI40	YER003C	IOC4	Q04213	475 aa		4.93	□□□□□ -1.62
PMI40	YER003C	YOR296W	Q08748	1289 aa		4.93	□□□□□ -1.62
PMI40	YER003C	OXR1	Q08952	273 aa		4.93	□□□□□ -1.62
PMI40	YER003C	PIN2	Q12057	282 aa		4.93	□□□□□ -1.62
PMI40	YER003C	YOL098C	Q12496	1037 aa		4.93	□□□□□ -1.62
PMI40	YER003C	BRN1	P38170	754 aa		4.92	□□□□□ -1.62
PMI40	YER003C	GIP1	P38229	639 aa		4.92	□□□□□ -1.62
PMI40	YER003C	NMD2	P38798	1089 aa	Known RBP	4.92	□□□□□ -1.62
PMI40	YER003C	CUS1	Q02554	436 aa	Predicted RBP	4.92	□□□□□ -1.62
PMI40	YER003C	ESF1	Q06344	628 aa	Known RBP	4.92	□□□□□ -1.62
PMI40	YER003C	CYC8	P14922	966 aa		4.91	□□□□□ -1.62
PMI40	YER003C	MSN1	P22148	382 aa		4.91	□□□□□ -1.62
PMI40	YER003C	PEP7	P32609	515 aa		4.91	□□□□□ -1.62
PMI40	YER003C	MNR2	P35724	969 aa		4.91	□□□□□ -1.62
PMI40	YER003C	RPS26A	P39938	119 aa	Known RBP	4.91	□□□□□ -1.62
PMI40	YER003C	RPS26B	P39939	119 aa	Known RBP	4.91	□□□□□ -1.62
PMI40	YER003C	VAC8	P39968	578 aa		4.91	□□□□□ -1.62
PMI40	YER003C	ALD3	P54114	506 aa		4.91	□□□□□ -1.62
PMI40	YER003C	ALD6	P54115	500 aa	Known RBP	4.91	□□□□□ -1.62
PMI40	YER003C	NOC3	Q07896	663 aa	Predicted RBP	4.91	□□□□□ -1.62
PMI40	YER003C	NCL1	P38205	684 aa	Known RBP	4.9	□□□□□ -1.63
PMI40	YER003C	APM2	P38700	605 aa		4.9	□□□□□ -1.63
PMI40	YER003C	CEM1	P39525	442 aa		4.9	□□□□□ -1.63
PMI40	YER003C	NTA1	P40354	457 aa		4.9	□□□□□ -1.63
PMI40	YER003C	SBE2	P42223	864 aa	Known RBP	4.9	□□□□□ -1.63
PMI40	YER003C	YJL049W	P47048	450 aa		4.9	□□□□□ -1.63
PMI40	YER003C	YAF9	P53930	226 aa		4.9	□□□□□ -1.63
PMI40	YER003C	BSC2	Q05611	235 aa		4.9	□□□□□ -1.63
PMI40	YER003C	YDR461C-A	Q2V2P7	80 aa		4.9	□□□□□ -1.63
PMI40	YER003C	YPR053C	Q6Q5F3	151 aa		4.9	□□□□□ -1.63
PMI40	YER003C	HXK1	P04806	485 aa	Known RBP	4.89	□□□□□ -1.63
PMI40	YER003C	RAD2	P07276	1031 aa		4.89	□□□□□ -1.63
PMI40	YER003C	FPS1	P23900	669 aa		4.89	□□□□□ -1.63
PMI40	YER003C	SPC42	P36094	363 aa		4.89	□□□□□ -1.63
PMI40	YER003C	BSD2	P38356	321 aa		4.89	□□□□□ -1.63
PMI40	YER003C	RAD55	P38953	406 aa		4.89	□□□□□ -1.63
PMI40	YER003C	KRE33	P53914	1056 aa	Known RBP	4.89	□□□□□ -1.63
PMI40	YER003C	HEH2	Q03281	663 aa		4.89	□□□□□ -1.63
PMI40	YER003C	SBP1	P10080	294 aa	Known RBP	4.88	□□□□□ -1.63
PMI40	YER003C	IRS4	P36115	615 aa	Known RBP	4.88	□□□□□ -1.63
PMI40	YER003C	SRP40	P32583	406 aa	Predicted RBP	4.87	□□□□□ -1.63
PMI40	YER003C	PET112	P33893	541 aa		4.87	□□□□□ -1.63
PMI40	YER003C	PSY2	P40164	858 aa		4.87	□□□□□ -1.63
PMI40	YER003C	RGD2	P43556	714 aa		4.87	□□□□□ -1.63
PMI40	YER003C	ADE12	P80210	433 aa	Known RBP	4.87	□□□□□ -1.63
PMI40	YER003C	TDA6	Q06466	467 aa		4.87	□□□□□ -1.63
PMI40	YER003C	WRS1	Q12109	432 aa	Known RBP	4.87	□□□□□ -1.63
PMI40	YER003C	AIM46	P38885	310 aa		4.86	□□□□□ -1.63
PMI40	YER003C	YER156C	P40093	338 aa	Known RBP	4.86	□□□□□ -1.63
PMI40	YER003C	MRPS18	P42847	217 aa		4.86	□□□□□ -1.63
PMI40	YER003C	ITC1	P53125	1264 aa		4.86	□□□□□ -1.63
PMI40	YER003C	YCS4	Q06156	1176 aa		4.86	□□□□□ -1.63
PMI40	YER003C	TOS4	Q06266	489 aa		4.86	□□□□□ -1.63
PMI40	YER003C	RSC2	Q06488	889 aa		4.86	□□□□□ -1.63
PMI40	YER003C	SYT1	Q06836	1226 aa		4.86	□□□□□ -1.63
PMI40	YER003C	SSF2	Q12153	453 aa	Predicted RBP	4.86	□□□□□ -1.63
PMI40	YER003C	MCD1	Q12158	566 aa		4.86	□□□□□ -1.63
PMI40	YER003C	TIF6	Q12522	245 aa	Known RBP	4.86	□□□□□ -1.63
PMI40	YER003C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
PMI40	YER003C	FAA3	P39002	694 aa		4.85	□□□□□ -1.63
PMI40	YER003C	YIL165C	P40446	119 aa		4.85	□□□□□ -1.63
PMI40	YER003C	OSW7	P43611	510 aa		4.85	□□□□□ -1.63
PMI40	YER003C	RNH70	P53331	553 aa		4.85	□□□□□ -1.63
PMI40	YER003C	INP54	Q08227	384 aa	Known RBP	4.85	□□□□□ -1.63
PMI40	YER003C	FLP1	P03870	423 aa		4.84	□□□□□ -1.63
PMI40	YER003C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
PMI40	YER003C	KAR2	P16474	682 aa	Known RBP	4.84	□□□□□ -1.63
PMI40	YER003C	PRE9	P23638	258 aa	Known RBP	4.84	□□□□□ -1.63
PMI40	YER003C	PRP40	P33203	583 aa	Known RBP	4.84	□□□□□ -1.63
PMI40	YER003C	YHL008C	P38750	627 aa		4.84	□□□□□ -1.63
PMI40	YER003C	IOC3	P43596	787 aa		4.84	□□□□□ -1.63
PMI40	YER003C	YNR040W	P53736	256 aa		4.84	□□□□□ -1.63
PMI40	YER003C	CWC24	P53769	259 aa		4.84	□□□□□ -1.63
PMI40	YER003C	DAL4	Q04895	635 aa		4.84	□□□□□ -1.63
PMI40	YER003C	NSE3	Q05541	303 aa		4.84	□□□□□ -1.63
PMI40	YER003C	YKL091C	P33324	310 aa	Known RBP	4.83	□□□□□ -1.64
PMI40	YER003C	MSC7	P38694	644 aa		4.83	□□□□□ -1.64
PMI40	YER003C	SKN7	P38889	622 aa		4.83	□□□□□ -1.64
PMI40	YER003C	TY1A-DR2	Q03964	440 aa	Known RBP	4.83	□□□□□ -1.64
PMI40	YER003C	EMG1	Q06287	252 aa	Known RBP	4.83	□□□□□ -1.64
PMI40	YER003C	IDI1	P15496	288 aa		4.82	□□□□□ -1.64
PMI40	YER003C	FAR11	P53917	953 aa		4.82	□□□□□ -1.64
PMI40	YER003C	YPL109C	Q02981	657 aa		4.82	□□□□□ -1.64
PMI40	YER003C	RPN4	Q03465	531 aa		4.82	□□□□□ -1.64
PMI40	YER003C	CIT2	P08679	460 aa		4.81	□□□□□ -1.64
PMI40	YER003C	CDC34	P14682	295 aa		4.81	□□□□□ -1.64
PMI40	YER003C	ECM2	P38241	364 aa	Known RBP	4.81	□□□□□ -1.64
PMI40	YER003C	YMR187C	Q03236	431 aa		4.81	□□□□□ -1.64
PMI40	YER003C	PPG1	P32838	368 aa		4.8	□□□□□ -1.64
PMI40	YER003C	RRP14	P36080	434 aa	Known RBP	4.8	□□□□□ -1.64
PMI40	YER003C	RVS167	P39743	482 aa	Known RBP	4.8	□□□□□ -1.64
PMI40	YER003C	PRK1	P40494	810 aa		4.8	□□□□□ -1.64
PMI40	YER003C	PPT1	P53043	513 aa		4.8	□□□□□ -1.64
PMI40	YER003C	YGR053C	P53234	283 aa		4.8	□□□□□ -1.64
PMI40	YER003C	CTR9	P89105	1077 aa		4.8	□□□□□ -1.64
PMI40	YER003C	GDE1	Q02979	1223 aa		4.8	□□□□□ -1.64
PMI40	YER003C	ADI1	Q03677	179 aa		4.8	□□□□□ -1.64
PMI40	YER003C	MSH6	Q03834	1242 aa		4.8	□□□□□ -1.64
PMI40	YER003C	YOR131C	Q12486	218 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms