RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	STE6	P12866	1290 aa		5.93	□□□□□ -1.46
UBC8	YEL012W	UTR2	P32623	467 aa		5.93	□□□□□ -1.46
UBC8	YEL012W	YJL181W	P46987	611 aa		5.93	□□□□□ -1.46
UBC8	YEL012W	TRS33	Q99394	268 aa		5.93	□□□□□ -1.46
UBC8	YEL012W	ROM2	P51862	1356 aa	Known RBP	5.93	□□□□□ -1.46
UBC8	YEL012W	CYT1	P07143	309 aa		5.92	□□□□□ -1.46
UBC8	YEL012W	CDC4	P07834	779 aa		5.92	□□□□□ -1.46
UBC8	YEL012W	ALD2	P47771	506 aa		5.92	□□□□□ -1.46
UBC8	YEL012W	ATG1	P53104	897 aa		5.92	□□□□□ -1.46
UBC8	YEL012W	TCB1	Q12466	1186 aa		5.92	□□□□□ -1.46
UBC8	YEL012W	RSF2	P46974	1380 aa		5.92	□□□□□ -1.46
UBC8	YEL012W	COB	P00163	385 aa		5.91	□□□□□ -1.46
UBC8	YEL012W	BOI1	P38041	980 aa	Known RBP	5.91	□□□□□ -1.46
UBC8	YEL012W	STM1	P39015	273 aa	Known RBP	5.91	□□□□□ -1.46
UBC8	YEL012W	HED1	Q03937	162 aa		5.91	□□□□□ -1.46
UBC8	YEL012W	DFG5	Q05031	458 aa		5.91	□□□□□ -1.46
UBC8	YEL012W	NAP1	P25293	417 aa	Known RBP	5.9	□□□□□ -1.46
UBC8	YEL012W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.9	□□□□□ -1.46	not detected
UBC8	YEL012W	HEM3	P28789	327 aa		5.9	□□□□□ -1.46
UBC8	YEL012W	NGR1	P32831	672 aa	Known RBP	5.9	□□□□□ -1.46
UBC8	YEL012W	YKR075C	P36155	307 aa		5.9	□□□□□ -1.46
UBC8	YEL012W	GRS1	P38088	690 aa	Known RBP	5.9	□□□□□ -1.46
UBC8	YEL012W	MSC6	Q08818	692 aa	Known RBP	5.9	□□□□□ -1.46
UBC8	YEL012W	WTM2	Q12206	467 aa		5.9	□□□□□ -1.46
UBC8	YEL012W	LSO1	Q3E827	93 aa		5.9	□□□□□ -1.46
UBC8	YEL012W	YRF1-4	O13559	1382 aa		5.9	□□□□□ -1.47
UBC8	YEL012W	GAR1	P28007	205 aa	Known RBP	5.89	□□□□□ -1.47
UBC8	YEL012W	YKL133C	P36066	463 aa		5.89	□□□□□ -1.47
UBC8	YEL012W	NOP7	P53261	605 aa	Known RBP	5.89	□□□□□ -1.47
UBC8	YEL012W	YPQ2	Q06328	317 aa		5.89	□□□□□ -1.47
UBC8	YEL012W	MET32	Q12041	191 aa		5.89	□□□□□ -1.47
UBC8	YEL012W	SLM3	Q12093	417 aa		5.89	□□□□□ -1.47
UBC8	YEL012W	APC1	P53886	1748 aa		5.88	□□□□□ -1.47
UBC8	YEL012W	PRP40	P33203	583 aa	Known RBP	5.88	□□□□□ -1.47
UBC8	YEL012W	YHL050C	P38721	697 aa		5.88	□□□□□ -1.47
UBC8	YEL012W	YHR219W	P38900	624 aa		5.88	□□□□□ -1.47
UBC8	YEL012W	EDE1	P34216	1381 aa		5.88	□□□□□ -1.47
UBC8	YEL012W	SNF2	P22082	1703 aa		5.88	□□□□□ -1.47
UBC8	YEL012W	FUR4	P05316	633 aa	Known RBP	5.87	□□□□□ -1.47
UBC8	YEL012W	RPS24A	P0CX31	135 aa	Known RBP	5.87	□□□□□ -1.47
UBC8	YEL012W	RPS24B	P0CX32	135 aa	Known RBP	5.87	□□□□□ -1.47
UBC8	YEL012W	DAT1	P13483	248 aa	Known RBP	5.87	□□□□□ -1.47
UBC8	YEL012W	YBR197C	P38306	217 aa		5.87	□□□□□ -1.47
UBC8	YEL012W	QDR1	P40475	563 aa		5.87	□□□□□ -1.47
UBC8	YEL012W	SEC20	P28791	383 aa		5.86	□□□□□ -1.47
UBC8	YEL012W	ESL2	P36168	1195 aa		5.86	□□□□□ -1.47
UBC8	YEL012W	TBS1	P38114	1094 aa		5.86	□□□□□ -1.47
UBC8	YEL012W	GLO3	P38682	493 aa	Known RBP	5.86	□□□□□ -1.47
UBC8	YEL012W	HXT5	P38695	592 aa		5.86	□□□□□ -1.47
UBC8	YEL012W	XKS1	P42826	600 aa		5.86	□□□□□ -1.47
UBC8	YEL012W	ACF4	P47129	309 aa		5.86	□□□□□ -1.47
UBC8	YEL012W	RRP15	Q06511	250 aa	Predicted RBP	5.86	□□□□□ -1.47
UBC8	YEL012W	WHI5	Q12416	295 aa		5.86	□□□□□ -1.47
UBC8	YEL012W	FRT1	Q99332	602 aa		5.86	□□□□□ -1.47
UBC8	YEL012W	PPX1	P38698	397 aa		5.85	□□□□□ -1.47
UBC8	YEL012W	NUT2	Q06213	157 aa		5.85	□□□□□ -1.47
UBC8	YEL012W	BDS1	Q08347	646 aa		5.85	□□□□□ -1.47
UBC8	YEL012W	MCM1	P11746	286 aa		5.84	□□□□□ -1.47
UBC8	YEL012W	ISC10	P32645	267 aa		5.84	□□□□□ -1.47
UBC8	YEL012W	KTR2	P33550	425 aa		5.84	□□□□□ -1.47
UBC8	YEL012W	EAF6	P47128	113 aa		5.84	□□□□□ -1.47
UBC8	YEL012W	CWH41	P53008	833 aa		5.84	□□□□□ -1.47
UBC8	YEL012W	APC11	Q12157	165 aa		5.84	□□□□□ -1.47
UBC8	YEL012W	YEF3	P16521	1044 aa	Known RBP	5.83	□□□□□ -1.48
UBC8	YEL012W	RRN6	P32786	894 aa		5.83	□□□□□ -1.48
UBC8	YEL012W	ASH1	P34233	588 aa		5.83	□□□□□ -1.48
UBC8	YEL012W	ENP1	P38333	483 aa	Known RBP	5.83	□□□□□ -1.48
UBC8	YEL012W	UTP7	P40055	554 aa	Known RBP	5.83	□□□□□ -1.48
UBC8	YEL012W	SUM1	P46676	1062 aa		5.83	□□□□□ -1.48
UBC8	YEL012W	RPP2B	P02400	110 aa	Known RBP	5.82	□□□□□ -1.48
UBC8	YEL012W	SPE2	P21182	396 aa		5.82	□□□□□ -1.48
UBC8	YEL012W	RIM15	P43565	1770 aa		5.81	□□□□□ -1.48
UBC8	YEL012W	ATE1	P16639	503 aa		5.81	□□□□□ -1.48
UBC8	YEL012W	RPB10	P22139	70 aa		5.81	□□□□□ -1.48
UBC8	YEL012W	PAM1	P37304	830 aa	Known RBP	5.81	□□□□□ -1.48
UBC8	YEL012W	KIP3	P53086	805 aa	Known RBP	5.81	□□□□□ -1.48
UBC8	YEL012W	PRP43	P53131	767 aa	Known RBP	5.81	□□□□□ -1.48
UBC8	YEL012W	MET22	P32179	357 aa		5.8	□□□□□ -1.48
UBC8	YEL012W	HST3	P53687	447 aa		5.8	□□□□□ -1.48
UBC8	YEL012W	YNL165W	P53891	406 aa		5.8	□□□□□ -1.48
UBC8	YEL012W	LEU2	P04173	364 aa	Predicted RBP	5.79	□□□□□ -1.48
UBC8	YEL012W	MRPL33	P20084	86 aa		5.79	□□□□□ -1.48
UBC8	YEL012W	AFT1	P22149	690 aa		5.79	□□□□□ -1.48
UBC8	YEL012W	MET4	P32389	672 aa		5.79	□□□□□ -1.48
UBC8	YEL012W	SNU71	P53207	620 aa	Known RBP	5.79	□□□□□ -1.48
UBC8	YEL012W	ADE16	P54113	591 aa	Known RBP	5.79	□□□□□ -1.48
UBC8	YEL012W	GPI13	Q07830	1017 aa		5.79	□□□□□ -1.48
UBC8	YEL012W	MNL2	Q12205	849 aa		5.79	□□□□□ -1.48
UBC8	YEL012W	YLR419W	Q06698	1435 aa	Known RBP	5.79	□□□□□ -1.48
UBC8	YEL012W	YML133C	Q03099	1374 aa		5.79	□□□□□ -1.48
UBC8	YEL012W	YLL067C	Q07888	1374 aa		5.79	□□□□□ -1.48
UBC8	YEL012W	YLL066C	Q99208	1374 aa		5.79	□□□□□ -1.48
UBC8	YEL012W	SSN3	P39073	555 aa		5.78	□□□□□ -1.48
UBC8	YEL012W	DLD3	P39976	496 aa	Known RBP	5.78	□□□□□ -1.48
UBC8	YEL012W	SPR3	P41901	512 aa		5.78	□□□□□ -1.48
UBC8	YEL012W	AAD14	P42884	376 aa		5.78	□□□□□ -1.48
UBC8	YEL012W	MTR4	P47047	1073 aa	Known RBP	5.78	□□□□□ -1.48
UBC8	YEL012W	TRS120	Q04183	1289 aa		5.78	□□□□□ -1.48
UBC8	YEL012W	SCD5	P34758	872 aa		5.77	□□□□□ -1.49
UBC8	YEL012W	SHM1	P37292	490 aa	Predicted RBP	5.77	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms