RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C STM1P39015 273 aaKnown RBP6.74□□□□□ -1.33
SEC20YDR498C BDH2P39713 417 aa6.74□□□□□ -1.33
SEC20YDR498C YIR042CP40586 236 aa6.74□□□□□ -1.33
SEC20YDR498C RPT4P53549 437 aaKnown RBP6.74□□□□□ -1.33
SEC20YDR498C HAP5Q02516 242 aa6.74□□□□□ -1.33
SEC20YDR498C SYF1Q04048 859 aaPredicted RBP6.74□□□□□ -1.33
SEC20YDR498C YLR326WQ06170 240 aaKnown RBP6.74□□□□□ -1.33
SEC20YDR498C BDF2Q07442 638 aa6.74□□□□□ -1.33
SEC20YDR498C PPM2Q08282 695 aa6.74□□□□□ -1.33
SEC20YDR498C LCB1P25045 558 aaKnown RBP6.73□□□□□ -1.33
SEC20YDR498C MID1P41821 548 aa6.73□□□□□ -1.33
SEC20YDR498C CTF18P49956 741 aa6.73□□□□□ -1.33
SEC20YDR498C KRE33P53914 1056 aaKnown RBP6.73□□□□□ -1.33
SEC20YDR498C TOS4Q06266 489 aa6.73□□□□□ -1.33
SEC20YDR498C DPH6Q12429 685 aa6.73□□□□□ -1.33
SEC20YDR498C SUP35P05453 685 aaKnown RBP6.72□□□□□ -1.33
SEC20YDR498C SSA2P10592 639 aaKnown RBP6.72□□□□□ -1.33
SEC20YDR498C OPI1P21957 404 aa6.72□□□□□ -1.33
SEC20YDR498C FRD1P32614 470 aaKnown RBP6.72□□□□□ -1.33
SEC20YDR498C OSH3P38713 996 aaKnown RBP6.72□□□□□ -1.33
SEC20YDR498C VID28P40547 921 aa6.72□□□□□ -1.33
SEC20YDR498C YGL081WP53156 320 aa6.72□□□□□ -1.33
SEC20YDR498C HDA1P53973 706 aa6.72□□□□□ -1.33
SEC20YDR498C IRC4Q03036 179 aa6.72□□□□□ -1.33
SEC20YDR498C INM2Q05533 292 aa6.72□□□□□ -1.33
SEC20YDR498C CHO2P05374 869 aaKnown RBP6.71□□□□□ -1.34
SEC20YDR498C COQ1P18900 473 aa6.71□□□□□ -1.34
SEC20YDR498C SMY1P32364 656 aaKnown RBP6.71□□□□□ -1.34
SEC20YDR498C RAD54P32863 898 aa6.71□□□□□ -1.34
SEC20YDR498C RPT3P33298 428 aaKnown RBP6.71□□□□□ -1.34
SEC20YDR498C SPO22P40511 975 aa6.71□□□□□ -1.34
SEC20YDR498C RRI2Q12348 645 aa6.71□□□□□ -1.34
SEC20YDR498C CPA2P03965 1118 aaKnown RBP6.7□□□□□ -1.34
SEC20YDR498C KRE2P27809 442 aa6.7□□□□□ -1.34
SEC20YDR498C SLI15P38283 698 aa6.7□□□□□ -1.34
SEC20YDR498C YHL050CP38721 697 aa6.7□□□□□ -1.34
SEC20YDR498C HYR1P40581 163 aaKnown RBP6.7□□□□□ -1.34
SEC20YDR498C HST1P53685 503 aa6.7□□□□□ -1.34
SEC20YDR498C NSG2P53898 299 aa6.7□□□□□ -1.34
SEC20YDR498C PEX29Q03370 554 aa6.7□□□□□ -1.34
SEC20YDR498C SRC1Q03707 834 aa6.7□□□□□ -1.34
SEC20YDR498C DIB1Q06819 143 aaPredicted RBP6.7□□□□□ -1.34
SEC20YDR498C TAH18Q12181 623 aa6.7□□□□□ -1.34
SEC20YDR498C FKS1P38631 1876 aaKnown RBP6.7□□□□□ -1.34
SEC20YDR498C FLO11P08640 1367 aa6.69□□□□□ -1.34
SEC20YDR498C PIF1P07271 859 aa6.69□□□□□ -1.34
SEC20YDR498C RPL19AP0CX82 189 aaKnown RBP6.69□□□□□ -1.34
SEC20YDR498C RPL19BP0CX83 189 aaPredicted RBP6.69□□□□□ -1.34
SEC20YDR498C SNF3P10870 884 aa6.69□□□□□ -1.34
SEC20YDR498C BIK1P11709 440 aa6.69□□□□□ -1.34
SEC20YDR498C PEP3P27801 918 aa6.69□□□□□ -1.34
SEC20YDR498C FBP26P32604 452 aa6.69□□□□□ -1.34
SEC20YDR498C ARL1P38116 183 aaKnown RBP6.69□□□□□ -1.34
SEC20YDR498C KIC1P38692 1080 aa6.69□□□□□ -1.34
SEC20YDR498C KRI1P42846 591 aaKnown RBP6.69□□□□□ -1.34
SEC20YDR498C PTK2P47116 818 aaKnown RBP6.69□□□□□ -1.34
SEC20YDR498C ALD3P54114 506 aa6.69□□□□□ -1.34
SEC20YDR498C HPC2Q01448 625 aa6.69□□□□□ -1.34
SEC20YDR498C YLR407WQ06070 228 aa6.69□□□□□ -1.34
SEC20YDR498C YPL150WQ12152 901 aa6.69□□□□□ -1.34
SEC20YDR498C FRS2P15625 503 aaKnown RBP6.68□□□□□ -1.34
SEC20YDR498C SIT4P20604 311 aa6.68□□□□□ -1.34
SEC20YDR498C IMP2'P32351 346 aa6.68□□□□□ -1.34
SEC20YDR498C PCS60P38137 543 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34 RIP-Chip
SEC20YDR498C PFF1P38244 976 aa6.68□□□□□ -1.34
SEC20YDR498C RPN1P38764 993 aaKnown RBP6.68□□□□□ -1.34
SEC20YDR498C RVS167P39743 482 aaKnown RBP6.68□□□□□ -1.34
SEC20YDR498C ENT3P47160 408 aa6.68□□□□□ -1.34
SEC20YDR498C ALD2P47771 506 aa6.68□□□□□ -1.34
SEC20YDR498C KIN4Q01919 800 aa6.68□□□□□ -1.34
SEC20YDR498C YDR090CQ03193 310 aa6.68□□□□□ -1.34
SEC20YDR498C PEX19Q07418 342 aa6.68□□□□□ -1.34
SEC20YDR498C PBS2P08018 668 aa6.67□□□□□ -1.34
SEC20YDR498C RET1P22276 1149 aaKnown RBP6.67□□□□□ -1.34
SEC20YDR498C SPB4P25808 606 aaPredicted RBP6.67□□□□□ -1.34
SEC20YDR498C PRX1P34227 261 aaKnown RBP6.67□□□□□ -1.34
SEC20YDR498C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
SEC20YDR498C PTK1P36002 662 aaPredicted RBP6.67□□□□□ -1.34
SEC20YDR498C MET1P36150 593 aa6.67□□□□□ -1.34
SEC20YDR498C ERT1P38140 529 aa6.67□□□□□ -1.34
SEC20YDR498C EPL1P43572 832 aa6.67□□□□□ -1.34
SEC20YDR498C IRC8P47046 822 aa6.67□□□□□ -1.34
SEC20YDR498C ERO1Q03103 563 aa6.67□□□□□ -1.34
SEC20YDR498C GAS5Q08193 484 aa6.67□□□□□ -1.34
SEC20YDR498C MATALPHA2P0CY08 210 aa6.66□□□□□ -1.34
SEC20YDR498C HMLALPHA2P0CY09 210 aa6.66□□□□□ -1.34
SEC20YDR498C RDS1P25611 832 aa6.66□□□□□ -1.34
SEC20YDR498C RKM3P38222 552 aa6.66□□□□□ -1.34
SEC20YDR498C NUG1P40010 520 aaKnown RBP6.66□□□□□ -1.34
SEC20YDR498C EAF6P47128 113 aa6.66□□□□□ -1.34
SEC20YDR498C ELG1Q12050 791 aa6.66□□□□□ -1.34
SEC20YDR498C APC11Q12157 165 aa6.66□□□□□ -1.34
SEC20YDR498C RPN12P32496 274 aa6.65□□□□□ -1.34
SEC20YDR498C RER2P35196 286 aa6.65□□□□□ -1.34
SEC20YDR498C YFH7P43591 353 aa6.65□□□□□ -1.34
SEC20YDR498C SSL2Q00578 843 aa6.65□□□□□ -1.34
SEC20YDR498C SAS4Q04003 481 aa6.65□□□□□ -1.34
SEC20YDR498C IRC3Q06683 689 aa6.65□□□□□ -1.34
SEC20YDR498C CYB2P00175 591 aa6.64□□□□□ -1.35
SEC20YDR498C COX6P00427 148 aa6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms