RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W ULP1Q02724 621 aa5.41□□□□□ -1.54
HPR1YDR138W DFG5Q05031 458 aa5.41□□□□□ -1.54
HPR1YDR138W YCS4Q06156 1176 aa5.41□□□□□ -1.54
HPR1YDR138W FLC1Q08967 793 aa5.41□□□□□ -1.54
HPR1YDR138W YOR131CQ12486 218 aa5.41□□□□□ -1.54
HPR1YDR138W PMC1P38929 1173 aaPredicted RBP5.4□□□□□ -1.54
HPR1YDR138W TPO2P53283 614 aa5.4□□□□□ -1.54
HPR1YDR138W FRK1Q03002 865 aaPredicted RBP5.4□□□□□ -1.54
HPR1YDR138W ESC2Q06340 456 aa5.4□□□□□ -1.54
HPR1YDR138W MCD1Q12158 566 aa5.4□□□□□ -1.54
HPR1YDR138W PHO8P11491 566 aa5.4□□□□□ -1.55
HPR1YDR138W SHM1P37292 490 aaPredicted RBP5.4□□□□□ -1.55
HPR1YDR138W BSD2P38356 321 aa5.4□□□□□ -1.55
HPR1YDR138W PUF4P25339 888 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
HPR1YDR138W IRS4P36115 615 aaKnown RBP5.39□□□□□ -1.55
HPR1YDR138W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
HPR1YDR138W YEN1P40028 759 aa5.39□□□□□ -1.55
HPR1YDR138W ZDS1P50111 915 aaKnown RBP5.39□□□□□ -1.55
HPR1YDR138W SYH1Q02875 849 aaKnown RBP5.39□□□□□ -1.55
HPR1YDR138W NAN1Q02931 896 aaKnown RBP5.39□□□□□ -1.55
HPR1YDR138W UTP4Q06679 776 aaKnown RBP5.39□□□□□ -1.55
HPR1YDR138W YGR161W-CQ3E744 92 aa5.39□□□□□ -1.55
HPR1YDR138W TBS1P38114 1094 aa5.38□□□□□ -1.55
HPR1YDR138W LDH1P38139 375 aa5.38□□□□□ -1.55
HPR1YDR138W SEA4P38164 1038 aa5.38□□□□□ -1.55
HPR1YDR138W YBR184WP38299 523 aa5.38□□□□□ -1.55
HPR1YDR138W FKH1P40466 484 aa5.38□□□□□ -1.55
HPR1YDR138W PFD1P46988 109 aa5.38□□□□□ -1.55
HPR1YDR138W ADI1Q03677 179 aa5.38□□□□□ -1.55
HPR1YDR138W BUD21Q08492 214 aaPredicted RBP5.38□□□□□ -1.55
HPR1YDR138W RPC31P17890 251 aa5.37□□□□□ -1.55
HPR1YDR138W SSN3P39073 555 aa5.37□□□□□ -1.55
HPR1YDR138W HXT13P39924 564 aa5.37□□□□□ -1.55
HPR1YDR138W HXT17P53631 564 aa5.37□□□□□ -1.55
HPR1YDR138W HXT15P54854 567 aa5.37□□□□□ -1.55
HPR1YDR138W EMG1Q06287 252 aaKnown RBP5.37□□□□□ -1.55
HPR1YDR138W MON1P53129 644 aa5.37□□□□□ -1.55
HPR1YDR138W CAN1P04817 590 aa5.36□□□□□ -1.55
HPR1YDR138W YJR115WP47152 169 aa5.36□□□□□ -1.55
HPR1YDR138W CHZ1P40019 153 aaPredicted RBP5.36□□□□□ -1.55
HPR1YDR138W TPM2P40414 161 aa5.36□□□□□ -1.55
HPR1YDR138W NUT1P53114 1132 aa5.36□□□□□ -1.55
HPR1YDR138W YNR029CP53729 429 aaKnown RBP5.36□□□□□ -1.55
HPR1YDR138W BAS1P22035 811 aa5.35□□□□□ -1.55
HPR1YDR138W RPL8BP29453 256 aaKnown RBP5.35□□□□□ -1.55
HPR1YDR138W DYS1P38791 387 aa5.35□□□□□ -1.55
HPR1YDR138W MAL11P53048 616 aa5.35□□□□□ -1.55
HPR1YDR138W RTT10Q08924 1013 aa5.35□□□□□ -1.55
HPR1YDR138W FAL1Q12099 399 aaKnown RBP5.35□□□□□ -1.55
HPR1YDR138W TY1A-DR3Q12441 440 aa5.35□□□□□ -1.55
HPR1YDR138W RTA1P53047 317 aa5.35□□□□□ -1.55
HPR1YDR138W YLR125WQ12138 136 aa5.35□□□□□ -1.55
HPR1YDR138W NOP14Q99207 810 aaKnown RBP5.35□□□□□ -1.55
HPR1YDR138W RPL8AP17076 256 aaKnown RBP5.34□□□□□ -1.55
HPR1YDR138W MSH6Q03834 1242 aa5.34□□□□□ -1.55
HPR1YDR138W THI4P32318 326 aa5.34□□□□□ -1.56
HPR1YDR138W MSH4P40965 878 aaPredicted RBP5.34□□□□□ -1.56
HPR1YDR138W XKS1P42826 600 aa5.34□□□□□ -1.56
HPR1YDR138W FOL1P53848 824 aa5.34□□□□□ -1.56
HPR1YDR138W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.34□□□□□ -1.56not detected
HPR1YDR138W REC8Q12188 680 aa5.34□□□□□ -1.56
HPR1YDR138W ABD1P32783 436 aaPredicted RBP5.33□□□□□ -1.56
HPR1YDR138W BET3P36149 193 aa5.33□□□□□ -1.56
HPR1YDR138W CRP1P38845 465 aaKnown RBP5.33□□□□□ -1.56
HPR1YDR138W SAP155P43612 1002 aa5.33□□□□□ -1.56
HPR1YDR138W YGR125WP53273 1036 aa5.33□□□□□ -1.56
HPR1YDR138W SAS4Q04003 481 aa5.33□□□□□ -1.56
HPR1YDR138W HDA2Q06629 674 aa5.33□□□□□ -1.56
HPR1YDR138W AIR2Q12476 344 aaKnown RBP5.33□□□□□ -1.56
HPR1YDR138W SRM1P21827 482 aa5.32□□□□□ -1.56
HPR1YDR138W PYC2P32327 1180 aaKnown RBP5.32□□□□□ -1.56
HPR1YDR138W YGL081WP53156 320 aa5.32□□□□□ -1.56
HPR1YDR138W FMP25Q08023 583 aa5.32□□□□□ -1.56
HPR1YDR138W NTG2Q08214 380 aa5.32□□□□□ -1.56
HPR1YDR138W GIP1P38229 639 aa5.32□□□□□ -1.56
HPR1YDR138W JJJ2P46997 583 aa5.32□□□□□ -1.56
HPR1YDR138W TAF8Q03750 510 aa5.32□□□□□ -1.56
HPR1YDR138W YOR296WQ08748 1289 aa5.32□□□□□ -1.56
HPR1YDR138W TRP2P00899 507 aaKnown RBP5.31□□□□□ -1.56
HPR1YDR138W KAP122P32767 1081 aa5.31□□□□□ -1.56
HPR1YDR138W SLA1P32790 1244 aa5.31□□□□□ -1.56
HPR1YDR138W VBA5P36172 582 aa5.31□□□□□ -1.56
HPR1YDR138W ISW1P38144 1129 aa5.31□□□□□ -1.56
HPR1YDR138W KRE33P53914 1056 aaKnown RBP5.31□□□□□ -1.56
HPR1YDR138W UTP14Q04500 899 aaKnown RBP5.31□□□□□ -1.56
HPR1YDR138W MRL1Q06815 381 aa5.31□□□□□ -1.56
HPR1YDR138W RER2P35196 286 aa5.31□□□□□ -1.56
HPR1YDR138W PRE3P38624 215 aa5.31□□□□□ -1.56
HPR1YDR138W FIR1P40020 876 aa5.31□□□□□ -1.56
HPR1YDR138W GYP1Q08484 637 aa5.31□□□□□ -1.56
HPR1YDR138W ADR1P07248 1323 aa5.31□□□□□ -1.56
HPR1YDR138W CDC11P32458 415 aa5.3□□□□□ -1.56
HPR1YDR138W RIM11P38615 370 aa5.3□□□□□ -1.56
HPR1YDR138W YGL140CP53120 1219 aa5.3□□□□□ -1.56
HPR1YDR138W ITC1P53125 1264 aa5.3□□□□□ -1.56
HPR1YDR138W YLR225CQ05948 407 aaKnown RBP5.3□□□□□ -1.56
HPR1YDR138W CIT1P00890 479 aa5.3□□□□□ -1.56
HPR1YDR138W AGP1P25376 633 aa5.3□□□□□ -1.56
HPR1YDR138W MSH2P25847 964 aa5.3□□□□□ -1.56
HPR1YDR138W AMN1P38285 549 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms