RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C FUS1P11710 512 aa3.28□□□□□ -1.88
SSS1YDR086C RPB10P22139 70 aa3.28□□□□□ -1.88
SSS1YDR086C PUB1P32588 453 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
SSS1YDR086C SMC1P32908 1225 aa3.28□□□□□ -1.88
SSS1YDR086C KTR2P33550 425 aa3.28□□□□□ -1.88
SSS1YDR086C MAE1P36013 669 aaKnown RBP3.28□□□□□ -1.88
SSS1YDR086C TOS1P38288 455 aa3.28□□□□□ -1.88
SSS1YDR086C PAN5P38787 379 aa3.28□□□□□ -1.88
SSS1YDR086C SPO74P45819 413 aa3.28□□□□□ -1.88
SSS1YDR086C SPO71Q03868 1245 aa3.28□□□□□ -1.88
SSS1YDR086C REC8Q12188 680 aa3.28□□□□□ -1.88
SSS1YDR086C TRP3P00937 484 aa3.27□□□□□ -1.89
SSS1YDR086C MSB1P21339 1137 aaKnown RBP3.27□□□□□ -1.89
SSS1YDR086C TFA2P36145 328 aa3.27□□□□□ -1.89
SSS1YDR086C YKR073CP36153 106 aa3.27□□□□□ -1.89
SSS1YDR086C BOI1P38041 980 aaKnown RBP3.27□□□□□ -1.89
SSS1YDR086C AKR1P39010 764 aa3.27□□□□□ -1.89
SSS1YDR086C RGD2P43556 714 aa3.27□□□□□ -1.89
SSS1YDR086C ALD3P54114 506 aa3.27□□□□□ -1.89
SSS1YDR086C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
SSS1YDR086C LSO1Q3E827 93 aa3.27□□□□□ -1.89
SSS1YDR086C LIP5P32875 414 aa3.26□□□□□ -1.89
SSS1YDR086C IRS4P36115 615 aaKnown RBP3.26□□□□□ -1.89
SSS1YDR086C POL5P39985 1022 aaKnown RBP3.26□□□□□ -1.89
SSS1YDR086C AOS1Q06624 347 aa3.26□□□□□ -1.89
SSS1YDR086C ELM1P32801 640 aa3.25□□□□□ -1.89
SSS1YDR086C RAD55P38953 406 aa3.25□□□□□ -1.89
SSS1YDR086C YGR130CP53278 816 aa3.25□□□□□ -1.89
SSS1YDR086C FAR11P53917 953 aa3.25□□□□□ -1.89
SSS1YDR086C MAG2Q06436 670 aaKnown RBP3.25□□□□□ -1.89
SSS1YDR086C BRE4Q07660 1125 aa3.25□□□□□ -1.89
SSS1YDR086C ELG1Q12050 791 aa3.25□□□□□ -1.89
SSS1YDR086C TIF6Q12522 245 aaKnown RBP3.25□□□□□ -1.89
SSS1YDR086C CYC7P00045 113 aa3.24□□□□□ -1.89
SSS1YDR086C FUR4P05316 633 aaKnown RBP3.24□□□□□ -1.89
SSS1YDR086C HVG1P0CE11 249 aa3.24□□□□□ -1.89
SSS1YDR086C NAM7P30771 971 aaKnown RBP3.24□□□□□ -1.89
SSS1YDR086C BOL3P39724 118 aa3.24□□□□□ -1.89
SSS1YDR086C PSY2P40164 858 aa3.24□□□□□ -1.89
SSS1YDR086C AVT1P47082 602 aa3.24□□□□□ -1.89
SSS1YDR086C CTH1P47976 325 aa3.24□□□□□ -1.89
SSS1YDR086C NCE103P53615 221 aa3.24□□□□□ -1.89
SSS1YDR086C YLL054CQ12244 843 aa3.24□□□□□ -1.89
SSS1YDR086C NEO1P40527 1151 aa3.23□□□□□ -1.89
SSS1YDR086C FET4P40988 552 aa3.23□□□□□ -1.89
SSS1YDR086C YJR124CP47159 448 aa3.23□□□□□ -1.89
SSS1YDR086C YNR065CP53751 1116 aa3.23□□□□□ -1.89
SSS1YDR086C SUB2Q07478 446 aaKnown RBP3.23□□□□□ -1.89
SSS1YDR086C GLO4Q12320 285 aa3.23□□□□□ -1.89
SSS1YDR086C HAS1Q03532 505 aaKnown RBP3.22□□□□□ -1.89
SSS1YDR086C GIC2Q06648 383 aa3.22□□□□□ -1.89
SSS1YDR086C NSI1Q12457 570 aa3.22□□□□□ -1.89
SSS1YDR086C ERS1P17261 260 aa3.21□□□□□ -1.9
SSS1YDR086C PYC2P32327 1180 aaKnown RBP3.21□□□□□ -1.9
SSS1YDR086C YOR059CQ08448 450 aaKnown RBP3.21□□□□□ -1.9
SSS1YDR086C YOR223WQ12015 292 aa3.21□□□□□ -1.9
SSS1YDR086C GLO3P38682 493 aaKnown RBP3.2□□□□□ -1.9
SSS1YDR086C GCV1P48015 400 aa3.2□□□□□ -1.9
SSS1YDR086C KIP3P53086 805 aaKnown RBP3.2□□□□□ -1.9
SSS1YDR086C UFD2P54860 961 aa3.2□□□□□ -1.9
SSS1YDR086C MMM1P41800 426 aa3.19□□□□□ -1.9
SSS1YDR086C CIT3P43635 486 aa3.19□□□□□ -1.9
SSS1YDR086C ECL1P48235 211 aa3.19□□□□□ -1.9
SSS1YDR086C RLF2Q12495 606 aa3.19□□□□□ -1.9
SSS1YDR086C NIT1P40447 199 aa3.18□□□□□ -1.9
SSS1YDR086C RSC4Q02206 625 aa3.18□□□□□ -1.9
SSS1YDR086C KAR5Q04746 504 aa3.18□□□□□ -1.9
SSS1YDR086C YMR074CQ04773 145 aa3.18□□□□□ -1.9
SSS1YDR086C YIG1Q08956 461 aa3.18□□□□□ -1.9
SSS1YDR086C PRP5P21372 849 aaPredicted RBP3.17□□□□□ -1.9
SSS1YDR086C ECM2P38241 364 aaKnown RBP3.17□□□□□ -1.9
SSS1YDR086C UBP5P39944 805 aa3.17□□□□□ -1.9
SSS1YDR086C QDR1P40475 563 aa3.17□□□□□ -1.9
SSS1YDR086C RPL34AP87262 121 aaPredicted RBP3.17□□□□□ -1.9
SSS1YDR086C CTR9P89105 1077 aa3.17□□□□□ -1.9
SSS1YDR086C COBP00163 385 aa3.16□□□□□ -1.9
SSS1YDR086C GPT2P36148 743 aa3.16□□□□□ -1.9
SSS1YDR086C ARL1P38116 183 aaKnown RBP3.16□□□□□ -1.9
SSS1YDR086C SEA4P38164 1038 aa3.16□□□□□ -1.9
SSS1YDR086C RIM11P38615 370 aa3.16□□□□□ -1.9
SSS1YDR086C ACF4P47129 309 aa3.16□□□□□ -1.9
SSS1YDR086C ATG1P53104 897 aa3.16□□□□□ -1.9
SSS1YDR086C SDH1Q00711 640 aa3.16□□□□□ -1.9
SSS1YDR086C MEC3Q02574 474 aa3.16□□□□□ -1.9
SSS1YDR086C MSH6Q03834 1242 aa3.16□□□□□ -1.9
SSS1YDR086C DOT1Q04089 582 aaKnown RBP3.16□□□□□ -1.9
SSS1YDR086C HTS1P07263 546 aaKnown RBP3.15□□□□□ -1.91
SSS1YDR086C NPR1P22211 790 aa3.15□□□□□ -1.91
SSS1YDR086C RCM1P53972 490 aa3.15□□□□□ -1.91
SSS1YDR086C CMR1Q12510 522 aaKnown RBP3.15□□□□□ -1.91
SSS1YDR086C GCD1P09032 578 aaPredicted RBP3.14□□□□□ -1.91
SSS1YDR086C WHI3P34761 661 aaKnown RBP3.14□□□□□ -1.91
SSS1YDR086C POL12P38121 705 aaPredicted RBP3.14□□□□□ -1.91
SSS1YDR086C SAP155P43612 1002 aa3.14□□□□□ -1.91
SSS1YDR086C PRP43P53131 767 aaKnown RBP3.14□□□□□ -1.91
SSS1YDR086C UTP22P53254 1237 aaPredicted RBP3.14□□□□□ -1.91
SSS1YDR086C ORC3P54790 616 aa3.14□□□□□ -1.91
SSS1YDR086C PMT7Q06644 662 aa3.14□□□□□ -1.91
SSS1YDR086C DFG16Q99234 619 aa3.14□□□□□ -1.91
SSS1YDR086C DUR3P33413 735 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms