RNA–Protein interactions for RNA: YDR002W

YRB1, Transcript of Ran GTPase binding protein, yeast

Gene YRB1, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRB1	YDR002W	BIO5	P53744	561 aa	Known RBP	4.08	□□□□□ -1.76
YRB1	YDR002W	WHI3	P34761	661 aa	Known RBP	4.07	□□□□□ -1.76
YRB1	YDR002W	KIP3	P53086	805 aa	Known RBP	4.07	□□□□□ -1.76
YRB1	YDR002W	RCM1	P53972	490 aa		4.07	□□□□□ -1.76
YRB1	YDR002W	YOR059C	Q08448	450 aa	Known RBP	4.07	□□□□□ -1.76
YRB1	YDR002W	BSD2	P38356	321 aa		4.06	□□□□□ -1.76
YRB1	YDR002W	YIL165C	P40446	119 aa		4.06	□□□□□ -1.76
YRB1	YDR002W	PNS1	Q12412	539 aa		4.06	□□□□□ -1.76
YRB1	YDR002W	ERS1	P17261	260 aa		4.05	□□□□□ -1.76
YRB1	YDR002W	AIM3	P38266	947 aa	Known RBP	4.05	□□□□□ -1.76
YRB1	YDR002W	DYS1	P38791	387 aa		4.05	□□□□□ -1.76
YRB1	YDR002W	ACS2	P52910	683 aa	Known RBP	4.04	□□□□□ -1.76
YRB1	YDR002W	RIM8	P53179	542 aa		4.04	□□□□□ -1.76
YRB1	YDR002W	MRX10	Q05648	414 aa		4.04	□□□□□ -1.76
YRB1	YDR002W	PKC1	P24583	1151 aa		4.03	□□□□□ -1.76
YRB1	YDR002W	ADP1	P25371	1049 aa		4.03	□□□□□ -1.76
YRB1	YDR002W	TFA2	P36145	328 aa		4.03	□□□□□ -1.76
YRB1	YDR002W	OYE3	P41816	400 aa	Predicted RBP	4.03	□□□□□ -1.76
YRB1	YDR002W	YML122C	Q03207	126 aa		4.03	□□□□□ -1.76
YRB1	YDR002W	GAS4	Q08271	471 aa		4.03	□□□□□ -1.76
YRB1	YDR002W	TUB2	P02557	457 aa	Known RBP	4.02	□□□□□ -1.77
YRB1	YDR002W	VMA3	P25515	160 aa		4.02	□□□□□ -1.77
YRB1	YDR002W	ISW1	P38144	1129 aa		4.02	□□□□□ -1.77
YRB1	YDR002W	TAF7	Q05021	590 aa		4.02	□□□□□ -1.77
YRB1	YDR002W	PHO87	P25360	923 aa		4.01	□□□□□ -1.77
YRB1	YDR002W	HAP4	P14064	554 aa		4	□□□□□ -1.77
YRB1	YDR002W	BOI1	P38041	980 aa	Known RBP	4	□□□□□ -1.77
YRB1	YDR002W	FAR11	P53917	953 aa		4	□□□□□ -1.77
YRB1	YDR002W	ALD3	P54114	506 aa		4	□□□□□ -1.77
YRB1	YDR002W	MRPL33	P20084	86 aa		3.99	□□□□□ -1.77
YRB1	YDR002W	PEP12	P32854	288 aa		3.99	□□□□□ -1.77
YRB1	YDR002W	YOR223W	Q12015	292 aa		3.99	□□□□□ -1.77
YRB1	YDR002W	LDH1	P38139	375 aa		3.98	□□□□□ -1.77
YRB1	YDR002W	NEO1	P40527	1151 aa		3.98	□□□□□ -1.77
YRB1	YDR002W	MRPL22	P53881	309 aa		3.98	□□□□□ -1.77
YRB1	YDR002W	CAB1	Q04430	367 aa		3.98	□□□□□ -1.77
YRB1	YDR002W	ENO1	P00924	437 aa	Known RBP	3.97	□□□□□ -1.77
YRB1	YDR002W	FUS1	P11710	512 aa		3.97	□□□□□ -1.77
YRB1	YDR002W	TOD6	P34219	525 aa		3.97	□□□□□ -1.77
YRB1	YDR002W	GPT2	P36148	743 aa		3.97	□□□□□ -1.77
YRB1	YDR002W	SSY1	Q03770	852 aa		3.97	□□□□□ -1.77
YRB1	YDR002W	LPX1	Q12405	387 aa	Known RBP	3.97	□□□□□ -1.77
YRB1	YDR002W	SOD2	P00447	233 aa		3.96	□□□□□ -1.78
YRB1	YDR002W	SHM2	P37291	469 aa	Known RBP	3.96	□□□□□ -1.78
YRB1	YDR002W	CLU1	Q03690	1277 aa	Known RBP	3.96	□□□□□ -1.78
YRB1	YDR002W	EMG1	Q06287	252 aa	Known RBP	3.96	□□□□□ -1.78
YRB1	YDR002W	CWH41	P53008	833 aa		3.95	□□□□□ -1.78
YRB1	YDR002W	HAS1	Q03532	505 aa	Known RBP	3.94	□□□□□ -1.78
YRB1	YDR002W	TRE1	Q08919	783 aa		3.94	□□□□□ -1.78
YRB1	YDR002W	YJR124C	P47159	448 aa		3.93	□□□□□ -1.78
YRB1	YDR002W	MSN1	P22148	382 aa		3.92	□□□□□ -1.78
YRB1	YDR002W	VAN1	P23642	535 aa		3.92	□□□□□ -1.78
YRB1	YDR002W	CTS1	P29029	562 aa		3.92	□□□□□ -1.78
YRB1	YDR002W	YBR287W	P38355	427 aa		3.92	□□□□□ -1.78
YRB1	YDR002W	ROM1	P53046	1155 aa		3.92	□□□□□ -1.78
YRB1	YDR002W	YMR074C	Q04773	145 aa		3.92	□□□□□ -1.78
YRB1	YDR002W	YPL277C	Q08989	487 aa		3.92	□□□□□ -1.78
YRB1	YDR002W	YDL177C	Q12257	170 aa		3.92	□□□□□ -1.78
YRB1	YDR002W	YLR358C	O13565	187 aa		3.91	□□□□□ -1.78
YRB1	YDR002W	HVG1	P0CE11	249 aa		3.91	□□□□□ -1.78
YRB1	YDR002W	RPS4A	P0CX35	261 aa	Known RBP	3.91	□□□□□ -1.78
YRB1	YDR002W	RPS4B	P0CX36	261 aa	Known RBP	3.91	□□□□□ -1.78
YRB1	YDR002W	PEX7	P39108	375 aa		3.91	□□□□□ -1.78
YRB1	YDR002W	DOT1	Q04089	582 aa	Known RBP	3.9	□□□□□ -1.79
YRB1	YDR002W	YLL054C	Q12244	843 aa		3.9	□□□□□ -1.79
YRB1	YDR002W	RPS13	P05756	151 aa	Known RBP	3.89	□□□□□ -1.79
YRB1	YDR002W	PRO1	P32264	428 aa		3.89	□□□□□ -1.79
YRB1	YDR002W	SUV3	P32580	737 aa		3.88	□□□□□ -1.79
YRB1	YDR002W	AIM46	P38885	310 aa		3.88	□□□□□ -1.79
YRB1	YDR002W	KTR7	P40504	517 aa		3.88	□□□□□ -1.79
YRB1	YDR002W	FOX2	Q02207	900 aa	Known RBP	3.88	□□□□□ -1.79
YRB1	YDR002W	TRS33	Q99394	268 aa		3.88	□□□□□ -1.79
YRB1	YDR002W	YJL007C	P47080	104 aa		3.87	□□□□□ -1.79
YRB1	YDR002W	PUS9	Q12069	462 aa		3.87	□□□□□ -1.79
YRB1	YDR002W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
YRB1	YDR002W	YBR197C	P38306	217 aa		3.86	□□□□□ -1.79
YRB1	YDR002W	FET4	P40988	552 aa		3.86	□□□□□ -1.79
YRB1	YDR002W	YVC1	Q12324	675 aa		3.86	□□□□□ -1.79
YRB1	YDR002W	RTG2	P32608	588 aa	Known RBP	3.85	□□□□□ -1.79
YRB1	YDR002W	FIR1	P40020	876 aa		3.85	□□□□□ -1.79
YRB1	YDR002W	ALT1	P52893	592 aa		3.85	□□□□□ -1.79
YRB1	YDR002W	GLO4	Q12320	285 aa		3.85	□□□□□ -1.79
YRB1	YDR002W	ETP1	P38748	585 aa	Known RBP	3.84	□□□□□ -1.79
YRB1	YDR002W	PTC7	P38797	343 aa		3.84	□□□□□ -1.79
YRB1	YDR002W	EAR1	Q03212	550 aa		3.84	□□□□□ -1.79
YRB1	YDR002W	GAL2	P13181	574 aa		3.83	□□□□□ -1.8
YRB1	YDR002W	GCV1	P48015	400 aa		3.83	□□□□□ -1.8
YRB1	YDR002W	SLI1	P53304	468 aa		3.83	□□□□□ -1.8
YRB1	YDR002W	TRM2	P33753	639 aa		3.82	□□□□□ -1.8
YRB1	YDR002W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
YRB1	YDR002W	MSH4	P40965	878 aa	Predicted RBP	3.82	□□□□□ -1.8
YRB1	YDR002W	SNO2	P53823	222 aa		3.82	□□□□□ -1.8
YRB1	YDR002W	TIF1	P10081	395 aa	Known RBP	3.81	□□□□□ -1.8
YRB1	YDR002W	TAT2	P38967	592 aa		3.8	□□□□□ -1.8
YRB1	YDR002W	SNM1	P40993	198 aa		3.8	□□□□□ -1.8
YRB1	YDR002W	MSE1	P48525	536 aa		3.8	□□□□□ -1.8
YRB1	YDR002W	GTS1	P40956	396 aa		3.79	□□□□□ -1.8
YRB1	YDR002W	ISC10	P32645	267 aa		3.78	□□□□□ -1.8
YRB1	YDR002W	HXT8	P40886	569 aa		3.78	□□□□□ -1.8
YRB1	YDR002W	RGD2	P43556	714 aa		3.77	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms