RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeast

Gene CDC36, Length 576 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC36	YDL165W	POL12	P38121	705 aa	Predicted RBP	4.17	□□□□□ -1.74
CDC36	YDL165W	LEM3	P42838	414 aa		4.17	□□□□□ -1.74
CDC36	YDL165W	ECL1	P48235	211 aa		4.17	□□□□□ -1.74
CDC36	YDL165W	BIO5	P53744	561 aa	Known RBP	4.17	□□□□□ -1.74
CDC36	YDL165W	SOG2	Q08817	791 aa		4.17	□□□□□ -1.74
CDC36	YDL165W	MSN1	P22148	382 aa		4.16	□□□□□ -1.74
CDC36	YDL165W	YKL222C	P35995	705 aa		4.16	□□□□□ -1.74
CDC36	YDL165W	ALD3	P54114	506 aa		4.16	□□□□□ -1.74
CDC36	YDL165W	DFG16	Q99234	619 aa		4.16	□□□□□ -1.74
CDC36	YDL165W	EMG1	Q06287	252 aa	Known RBP	4.15	□□□□□ -1.75
CDC36	YDL165W	GIC2	Q06648	383 aa		4.15	□□□□□ -1.75
CDC36	YDL165W	ELG1	Q12050	791 aa		4.15	□□□□□ -1.75
CDC36	YDL165W	SPO71	Q03868	1245 aa		4.14	□□□□□ -1.75
CDC36	YDL165W	ERS1	P17261	260 aa		4.13	□□□□□ -1.75
CDC36	YDL165W	ISC10	P32645	267 aa		4.13	□□□□□ -1.75
CDC36	YDL165W	TGL4	P36165	910 aa		4.13	□□□□□ -1.75
CDC36	YDL165W	KIP3	P53086	805 aa	Known RBP	4.13	□□□□□ -1.75
CDC36	YDL165W	ECM23	Q02710	187 aa		4.13	□□□□□ -1.75
CDC36	YDL165W	ESC8	Q08119	714 aa		4.13	□□□□□ -1.75
CDC36	YDL165W	FUS1	P11710	512 aa		4.12	□□□□□ -1.75
CDC36	YDL165W	GAS1	P22146	559 aa	Known RBP	4.12	□□□□□ -1.75
CDC36	YDL165W	PRP43	P53131	767 aa	Known RBP	4.12	□□□□□ -1.75
CDC36	YDL165W	BOI1	P38041	980 aa	Known RBP	4.11	□□□□□ -1.75
CDC36	YDL165W	YHL008C	P38750	627 aa		4.11	□□□□□ -1.75
CDC36	YDL165W	TAF1	P46677	1066 aa		4.11	□□□□□ -1.75
CDC36	YDL165W	NEO1	P40527	1151 aa		4.1	□□□□□ -1.75
CDC36	YDL165W	ALD4	P46367	519 aa	Known RBP	4.1	□□□□□ -1.75
CDC36	YDL165W	HGH1	P48362	394 aa	Known RBP	4.1	□□□□□ -1.75
CDC36	YDL165W	RQC2	Q12532	1038 aa	Known RBP	4.1	□□□□□ -1.75
CDC36	YDL165W	UBX7	P38349	436 aa		4.09	□□□□□ -1.75
CDC36	YDL165W	YBR287W	P38355	427 aa		4.09	□□□□□ -1.75
CDC36	YDL165W	AIM46	P38885	310 aa		4.09	□□□□□ -1.75
CDC36	YDL165W	CDA2	Q06703	312 aa		4.09	□□□□□ -1.75
CDC36	YDL165W	TSA1	P34760	196 aa	Known RBP	4.08	□□□□□ -1.76
CDC36	YDL165W	WHI3	P34761	661 aa	Known RBP	4.08	□□□□□ -1.76
CDC36	YDL165W	GIP4	P39732	760 aa		4.08	□□□□□ -1.76
CDC36	YDL165W	YJR124C	P47159	448 aa		4.08	□□□□□ -1.76
CDC36	YDL165W	YNR065C	P53751	1116 aa		4.08	□□□□□ -1.76
CDC36	YDL165W	HAS1	Q03532	505 aa	Known RBP	4.08	□□□□□ -1.76
CDC36	YDL165W	FIR1	P40020	876 aa		4.07	□□□□□ -1.76
CDC36	YDL165W	MMM1	P41800	426 aa		4.07	□□□□□ -1.76
CDC36	YDL165W	RGD2	P43556	714 aa		4.07	□□□□□ -1.76
CDC36	YDL165W	HVG1	P0CE11	249 aa		4.06	□□□□□ -1.76
CDC36	YDL165W	HSP78	P33416	811 aa		4.06	□□□□□ -1.76
CDC36	YDL165W	TTI1	P36097	1038 aa		4.06	□□□□□ -1.76
CDC36	YDL165W	HXT8	P40886	569 aa		4.06	□□□□□ -1.76
CDC36	YDL165W	CIT3	P43635	486 aa		4.06	□□□□□ -1.76
CDC36	YDL165W	FAR11	P53917	953 aa		4.06	□□□□□ -1.76
CDC36	YDL165W	NSI1	Q12457	570 aa		4.06	□□□□□ -1.76
CDC36	YDL165W	THI80	P35202	319 aa		4.05	□□□□□ -1.76
CDC36	YDL165W	PUN1	Q06991	263 aa		4.05	□□□□□ -1.76
CDC36	YDL165W	YOR223W	Q12015	292 aa		4.05	□□□□□ -1.76
CDC36	YDL165W	GLO4	Q12320	285 aa		4.05	□□□□□ -1.76
CDC36	YDL165W	GPT2	P36148	743 aa		4.04	□□□□□ -1.76
CDC36	YDL165W	RCM1	P53972	490 aa		4.04	□□□□□ -1.76
CDC36	YDL165W	GIS1	Q03833	894 aa		4.04	□□□□□ -1.76
CDC36	YDL165W	KTR2	P33550	425 aa		4.03	□□□□□ -1.76
CDC36	YDL165W	NTA1	P40354	457 aa		4.02	□□□□□ -1.77
CDC36	YDL165W	FET4	P40988	552 aa		4.02	□□□□□ -1.77
CDC36	YDL165W	OYE3	P41816	400 aa	Predicted RBP	4.02	□□□□□ -1.77
CDC36	YDL165W	PUF6	Q04373	656 aa	Known RBP	4.02	□□□□□ -1.77
CDC36	YDL165W	YMR074C	Q04773	145 aa		4.02	□□□□□ -1.77
CDC36	YDL165W	YOR059C	Q08448	450 aa	Known RBP	4.02	□□□□□ -1.77
CDC36	YDL165W	FLR1	P38124	548 aa		4.01	□□□□□ -1.77
CDC36	YDL165W	TIF6	Q12522	245 aa	Known RBP	4.01	□□□□□ -1.77
CDC36	YDL165W	SRS2	P12954	1174 aa		4	□□□□□ -1.77
CDC36	YDL165W	SUT1	P53032	299 aa	Known RBP	4	□□□□□ -1.77
CDC36	YDL165W	DOT1	Q04089	582 aa	Known RBP	4	□□□□□ -1.77
CDC36	YDL165W	HDA2	Q06629	674 aa		4	□□□□□ -1.77
CDC36	YDL165W	PRP6	P19735	899 aa	Predicted RBP	3.99	□□□□□ -1.77
CDC36	YDL165W	PUP1	P25043	261 aa		3.99	□□□□□ -1.77
CDC36	YDL165W	PYC2	P32327	1180 aa	Known RBP	3.99	□□□□□ -1.77
CDC36	YDL165W	RAD55	P38953	406 aa		3.99	□□□□□ -1.77
CDC36	YDL165W	ORC3	P54790	616 aa		3.99	□□□□□ -1.77
CDC36	YDL165W	APC11	Q12157	165 aa		3.99	□□□□□ -1.77
CDC36	YDL165W	ADP1	P25371	1049 aa		3.98	□□□□□ -1.77
CDC36	YDL165W	PSY2	P40164	858 aa		3.98	□□□□□ -1.77
CDC36	YDL165W	IRS4	P36115	615 aa	Known RBP	3.97	□□□□□ -1.77
CDC36	YDL165W	MSH6	Q03834	1242 aa		3.97	□□□□□ -1.77
CDC36	YDL165W	RPS4A	P0CX35	261 aa	Known RBP	3.96	□□□□□ -1.78
CDC36	YDL165W	RPS4B	P0CX36	261 aa	Known RBP	3.96	□□□□□ -1.78
CDC36	YDL165W	RPB10	P22139	70 aa		3.96	□□□□□ -1.78
CDC36	YDL165W	CPS1	P27614	576 aa		3.96	□□□□□ -1.78
CDC36	YDL165W	SSY1	Q03770	852 aa		3.96	□□□□□ -1.78
CDC36	YDL165W	CWC15	Q03772	175 aa	Known RBP	3.96	□□□□□ -1.78
CDC36	YDL165W	YLL054C	Q12244	843 aa		3.96	□□□□□ -1.78
CDC36	YDL165W	LPX1	Q12405	387 aa	Known RBP	3.96	□□□□□ -1.78
CDC36	YDL165W	GCV1	P48015	400 aa		3.95	□□□□□ -1.78
CDC36	YDL165W	EAR1	Q03212	550 aa		3.95	□□□□□ -1.78
CDC36	YDL165W	TRE1	Q08919	783 aa		3.95	□□□□□ -1.78
CDC36	YDL165W	RRN6	P32786	894 aa		3.94	□□□□□ -1.78
CDC36	YDL165W	SMC1	P32908	1225 aa		3.94	□□□□□ -1.78
CDC36	YDL165W	AIM3	P38266	947 aa	Known RBP	3.94	□□□□□ -1.78
CDC36	YDL165W	PEX7	P39108	375 aa		3.94	□□□□□ -1.78
CDC36	YDL165W	ALT1	P52893	592 aa		3.94	□□□□□ -1.78
CDC36	YDL165W	MSH4	P40965	878 aa	Predicted RBP	3.93	□□□□□ -1.78
CDC36	YDL165W	PNP1	Q05788	311 aa		3.93	□□□□□ -1.78
CDC36	YDL165W	YIG1	Q08956	461 aa		3.93	□□□□□ -1.78
CDC36	YDL165W	PRO1	P32264	428 aa		3.92	□□□□□ -1.78
CDC36	YDL165W	CTR9	P89105	1077 aa		3.92	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms