RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeast

Gene SRD1, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRD1	YCR018C	CUS1	Q02554	436 aa	Predicted RBP	4.77	□□□□□ -1.65
SRD1	YCR018C	MRP10	O75012	95 aa		4.76	□□□□□ -1.65
SRD1	YCR018C	RSC6	P25632	483 aa		4.76	□□□□□ -1.65
SRD1	YCR018C	SCD5	P34758	872 aa		4.76	□□□□□ -1.65
SRD1	YCR018C	PPX1	P38698	397 aa		4.76	□□□□□ -1.65
SRD1	YCR018C	YGR130C	P53278	816 aa		4.76	□□□□□ -1.65
SRD1	YCR018C	CAB1	Q04430	367 aa		4.76	□□□□□ -1.65
SRD1	YCR018C	SAF1	P38352	637 aa		4.75	□□□□□ -1.65
SRD1	YCR018C	APM2	P38700	605 aa		4.75	□□□□□ -1.65
SRD1	YCR018C	NUT2	Q06213	157 aa		4.75	□□□□□ -1.65
SRD1	YCR018C	CHS2	P14180	963 aa		4.74	□□□□□ -1.65
SRD1	YCR018C	KAP122	P32767	1081 aa		4.74	□□□□□ -1.65
SRD1	YCR018C	BOI1	P38041	980 aa	Known RBP	4.74	□□□□□ -1.65
SRD1	YCR018C	UBP5	P39944	805 aa		4.74	□□□□□ -1.65
SRD1	YCR018C	POL32	P47110	350 aa		4.74	□□□□□ -1.65
SRD1	YCR018C	MRPL33	P20084	86 aa		4.73	□□□□□ -1.65
SRD1	YCR018C	HXT5	P38695	592 aa		4.73	□□□□□ -1.65
SRD1	YCR018C	SUT1	P53032	299 aa	Known RBP	4.73	□□□□□ -1.65
SRD1	YCR018C	UFD2	P54860	961 aa		4.73	□□□□□ -1.65
SRD1	YCR018C	MAG2	Q06436	670 aa	Known RBP	4.73	□□□□□ -1.65
SRD1	YCR018C	UTP4	Q06679	776 aa	Known RBP	4.73	□□□□□ -1.65
SRD1	YCR018C	SLP1	Q12232	587 aa		4.73	□□□□□ -1.65
SRD1	YCR018C	FRT1	Q99332	602 aa		4.73	□□□□□ -1.65
SRD1	YCR018C	MGE1	P38523	228 aa		4.72	□□□□□ -1.65
SRD1	YCR018C	TRS120	Q04183	1289 aa		4.72	□□□□□ -1.65
SRD1	YCR018C	TY4B-P	A0A0B7P3V8	1104 aa		4.71	□□□□□ -1.66
SRD1	YCR018C	NAM7	P30771	971 aa	Known RBP	4.71	□□□□□ -1.66
SRD1	YCR018C	LDH1	P38139	375 aa		4.71	□□□□□ -1.66
SRD1	YCR018C	APC11	Q12157	165 aa		4.71	□□□□□ -1.66
SRD1	YCR018C	TY1A-NL1	Q12391	440 aa	Known RBP	4.71	□□□□□ -1.66
SRD1	YCR018C	WHI5	Q12416	295 aa		4.71	□□□□□ -1.66
SRD1	YCR018C	TY4A-H	Q6Q5P6	413 aa		4.71	□□□□□ -1.66
SRD1	YCR018C	IDI1	P15496	288 aa		4.7	□□□□□ -1.66
SRD1	YCR018C	RPB10	P22139	70 aa		4.7	□□□□□ -1.66
SRD1	YCR018C	RNQ1	P25367	405 aa		4.7	□□□□□ -1.66
SRD1	YCR018C	VMA3	P25515	160 aa		4.7	□□□□□ -1.66
SRD1	YCR018C	MET10	P39692	1035 aa		4.7	□□□□□ -1.66
SRD1	YCR018C	FIR1	P40020	876 aa		4.7	□□□□□ -1.66
SRD1	YCR018C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
SRD1	YCR018C	CYC7	P00045	113 aa		4.69	□□□□□ -1.66
SRD1	YCR018C	RPC31	P17890	251 aa		4.69	□□□□□ -1.66
SRD1	YCR018C	SMC1	P32908	1225 aa		4.69	□□□□□ -1.66
SRD1	YCR018C	YBR287W	P38355	427 aa		4.69	□□□□□ -1.66
SRD1	YCR018C	DYS1	P38791	387 aa		4.69	□□□□□ -1.66
SRD1	YCR018C	AKR1	P39010	764 aa		4.69	□□□□□ -1.66
SRD1	YCR018C	TED1	P40533	473 aa		4.69	□□□□□ -1.66
SRD1	YCR018C	HXT8	P40886	569 aa		4.69	□□□□□ -1.66
SRD1	YCR018C	ATE1	P16639	503 aa		4.68	□□□□□ -1.66
SRD1	YCR018C	MET4	P32389	672 aa		4.68	□□□□□ -1.66
SRD1	YCR018C	QDR2	P40474	542 aa		4.68	□□□□□ -1.66
SRD1	YCR018C	SPO74	P45819	413 aa		4.68	□□□□□ -1.66
SRD1	YCR018C	GCD6	P32501	712 aa	Known RBP	4.67	□□□□□ -1.66
SRD1	YCR018C	GIP2	P40036	548 aa		4.67	□□□□□ -1.66
SRD1	YCR018C	YNL011C	P53980	444 aa		4.67	□□□□□ -1.66
SRD1	YCR018C	SEC8	P32855	1065 aa		4.66	□□□□□ -1.66
SRD1	YCR018C	RAD55	P38953	406 aa		4.66	□□□□□ -1.66
SRD1	YCR018C	SAM37	P50110	327 aa		4.66	□□□□□ -1.66
SRD1	YCR018C	OYE2	Q03558	400 aa	Known RBP	4.66	□□□□□ -1.66
SRD1	YCR018C	REC8	Q12188	680 aa		4.66	□□□□□ -1.66
SRD1	YCR018C	PAM1	P37304	830 aa	Known RBP	4.65	□□□□□ -1.67
SRD1	YCR018C	ITC1	P53125	1264 aa		4.65	□□□□□ -1.67
SRD1	YCR018C	CDC55	Q00362	526 aa		4.65	□□□□□ -1.67
SRD1	YCR018C	RRP15	Q06511	250 aa	Predicted RBP	4.65	□□□□□ -1.67
SRD1	YCR018C	MSN1	P22148	382 aa		4.64	□□□□□ -1.67
SRD1	YCR018C	RPT1	P33299	467 aa	Known RBP	4.64	□□□□□ -1.67
SRD1	YCR018C	ISW1	P38144	1129 aa		4.64	□□□□□ -1.67
SRD1	YCR018C	YER156C	P40093	338 aa	Known RBP	4.64	□□□□□ -1.67
SRD1	YCR018C	SOK2	P53438	785 aa	Predicted RBP	4.64	□□□□□ -1.67
SRD1	YCR018C	DSE4	P53753	1117 aa		4.64	□□□□□ -1.67
SRD1	YCR018C	GPI13	Q07830	1017 aa		4.64	□□□□□ -1.67
SRD1	YCR018C	OXR1	Q08952	273 aa		4.64	□□□□□ -1.67
SRD1	YCR018C	MNL2	Q12205	849 aa		4.64	□□□□□ -1.67
SRD1	YCR018C	PHO4	P07270	312 aa	Known RBP	4.63	□□□□□ -1.67
SRD1	YCR018C	IRS4	P36115	615 aa	Known RBP	4.63	□□□□□ -1.67
SRD1	YCR018C	GIP1	P38229	639 aa		4.63	□□□□□ -1.67
SRD1	YCR018C	CIC1	P38779	376 aa	Known RBP	4.63	□□□□□ -1.67
SRD1	YCR018C	NTA1	P40354	457 aa		4.63	□□□□□ -1.67
SRD1	YCR018C	SVF1	Q05515	481 aa		4.63	□□□□□ -1.67
SRD1	YCR018C	BSC2	Q05611	235 aa		4.63	□□□□□ -1.67
SRD1	YCR018C	NOC3	Q07896	663 aa	Predicted RBP	4.63	□□□□□ -1.67
SRD1	YCR018C	KTR2	P33550	425 aa		4.62	□□□□□ -1.67
SRD1	YCR018C	VPS35	P34110	944 aa		4.62	□□□□□ -1.67
SRD1	YCR018C	SEG2	P34250	1132 aa		4.62	□□□□□ -1.67
SRD1	YCR018C	SEA4	P38164	1038 aa		4.62	□□□□□ -1.67
SRD1	YCR018C	ECM2	P38241	364 aa	Known RBP	4.62	□□□□□ -1.67
SRD1	YCR018C	DAK2	P43550	591 aa		4.62	□□□□□ -1.67
SRD1	YCR018C	YJR107W	P47145	328 aa		4.62	□□□□□ -1.67
SRD1	YCR018C	NAP1	P25293	417 aa	Known RBP	4.61	□□□□□ -1.67
SRD1	YCR018C	YCR015C	P25616	317 aa		4.61	□□□□□ -1.67
SRD1	YCR018C	LRG1	P35688	1017 aa		4.61	□□□□□ -1.67
SRD1	YCR018C	BSD2	P38356	321 aa		4.61	□□□□□ -1.67
SRD1	YCR018C	PSY2	P40164	858 aa		4.61	□□□□□ -1.67
SRD1	YCR018C	RGD2	P43556	714 aa		4.61	□□□□□ -1.67
SRD1	YCR018C	RSC4	Q02206	625 aa		4.61	□□□□□ -1.67
SRD1	YCR018C	YOR296W	Q08748	1289 aa		4.61	□□□□□ -1.67
SRD1	YCR018C	TIF6	Q12522	245 aa	Known RBP	4.61	□□□□□ -1.67
SRD1	YCR018C	PEP7	P32609	515 aa		4.6	□□□□□ -1.67
SRD1	YCR018C	YKL222C	P35995	705 aa		4.6	□□□□□ -1.67
SRD1	YCR018C	YHL008C	P38750	627 aa		4.6	□□□□□ -1.67
SRD1	YCR018C	AIM46	P38885	310 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms