RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeastyeast

Gene YCP4, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCP4YCR004C PIP2P52960 996 aa10.14□□□□□ -0.79
YCP4YCR004C SNU71P53207 620 aaKnown RBP10.14□□□□□ -0.79
YCP4YCR004C MSH4P40965 878 aaPredicted RBP10.13□□□□□ -0.79
YCP4YCR004C ICL2Q12031 575 aa10.13□□□□□ -0.79
YCP4YCR004C YOR131CQ12486 218 aa10.13□□□□□ -0.79
YCP4YCR004C SUI2P20459 304 aaKnown RBP10.12□□□□□ -0.79
YCP4YCR004C HAL5P38970 855 aaKnown RBP10.12□□□□□ -0.79
YCP4YCR004C FIR1P40020 876 aa10.12□□□□□ -0.79
YCP4YCR004C YNL193WP53870 558 aa10.12□□□□□ -0.79
YCP4YCR004C NSG2P53898 299 aa10.12□□□□□ -0.79
YCP4YCR004C TAO3P40468 2376 aa10.11□□□□□ -0.79
YCP4YCR004C KIN1P13185 1064 aa10.11□□□□□ -0.79
YCP4YCR004C WHI3P34761 661 aaKnown RBP10.11□□□□□ -0.79
YCP4YCR004C BOI1P38041 980 aaKnown RBP10.11□□□□□ -0.79
YCP4YCR004C SUB2Q07478 446 aaKnown RBP10.11□□□□□ -0.79
YCP4YCR004C YDL124WQ07551 312 aaKnown RBP10.11□□□□□ -0.79
YCP4YCR004C TFC8Q12308 588 aa10.11□□□□□ -0.79
YCP4YCR004C AI2P03876 854 aa10.1□□□□□ -0.79
YCP4YCR004C RPS19AP07280 144 aaKnown RBP10.1□□□□□ -0.79
YCP4YCR004C RPS19BP07281 144 aaPredicted RBP10.1□□□□□ -0.79
YCP4YCR004C DLD1P32891 587 aa10.1□□□□□ -0.79
YCP4YCR004C SSF1P38789 453 aaPredicted RBP10.1□□□□□ -0.79
YCP4YCR004C ECM30Q06673 1274 aa10.1□□□□□ -0.79
YCP4YCR004C YFL040WP43562 540 aa10.09□□□□□ -0.79
YCP4YCR004C YJL007CP47080 104 aa10.09□□□□□ -0.79
YCP4YCR004C RPN7Q06103 429 aaKnown RBP10.09□□□□□ -0.79
YCP4YCR004C YPR117WQ06116 2489 aa10.09□□□□□ -0.79
YCP4YCR004C RPP0P05317 312 aaKnown RBP10.08□□□□□ -0.8
YCP4YCR004C UIP5P36137 443 aa10.08□□□□□ -0.8
YCP4YCR004C YPL034WQ03083 165 aa10.08□□□□□ -0.8
YCP4YCR004C MET7Q08645 548 aa10.08□□□□□ -0.8
YCP4YCR004C CYB2P00175 591 aa10.07□□□□□ -0.8
YCP4YCR004C HOP09932 586 aa10.07□□□□□ -0.8
YCP4YCR004C DIT2P21595 489 aa10.07□□□□□ -0.8
YCP4YCR004C CST26P38226 397 aa10.07□□□□□ -0.8
YCP4YCR004C KEL3Q08979 651 aaPredicted RBP10.07□□□□□ -0.8
YCP4YCR004C SUT2Q12286 268 aa10.07□□□□□ -0.8
YCP4YCR004C MAM3Q12296 706 aa10.07□□□□□ -0.8
YCP4YCR004C ERG12P07277 443 aa10.06□□□□□ -0.8
YCP4YCR004C PKC1P24583 1151 aa10.06□□□□□ -0.8
YCP4YCR004C PER1P25625 357 aa10.06□□□□□ -0.8
YCP4YCR004C FUN12P39730 1002 aaKnown RBP10.06□□□□□ -0.8
YCP4YCR004C MXR1P40029 184 aa10.06□□□□□ -0.8
YCP4YCR004C YJR107WP47145 328 aa10.06□□□□□ -0.8
YCP4YCR004C BRE5P53741 515 aaKnown RBP10.06□□□□□ -0.8
YCP4YCR004C LAP2Q10740 671 aa10.06□□□□□ -0.8
YCP4YCR004C MPH3P0CE00 602 aa10.05□□□□□ -0.8
YCP4YCR004C PRE10P21242 288 aaKnown RBP RIP-Chip data10.05□□□□□ -0.8not detected
YCP4YCR004C EUG1P32474 517 aa10.05□□□□□ -0.8
YCP4YCR004C FMP30Q02883 468 aa10.05□□□□□ -0.8
YCP4YCR004C DAL5P15365 543 aa10.04□□□□□ -0.8
YCP4YCR004C VMA2P16140 517 aaKnown RBP10.04□□□□□ -0.8
YCP4YCR004C VPS27P40343 622 aaKnown RBP10.04□□□□□ -0.8
YCP4YCR004C AIM21P40563 679 aa10.04□□□□□ -0.8
YCP4YCR004C UBX5Q06682 500 aa10.04□□□□□ -0.8
YCP4YCR004C KRS1P15180 591 aaKnown RBP10.03□□□□□ -0.8
YCP4YCR004C SPB4P25808 606 aaPredicted RBP10.03□□□□□ -0.8
YCP4YCR004C GRX7P38068 203 aa10.03□□□□□ -0.8
YCP4YCR004C YAF9P53930 226 aa10.03□□□□□ -0.8
YCP4YCR004C MDM20Q12387 796 aaKnown RBP10.03□□□□□ -0.8
YCP4YCR004C NCB2Q92317 146 aa10.03□□□□□ -0.8
YCP4YCR004C YNG2P38806 282 aaKnown RBP10.02□□□□□ -0.81
YCP4YCR004C YML037CQ03703 340 aa10.02□□□□□ -0.81
YCP4YCR004C TIF4631P39935 952 aaKnown RBP10.01□□□□□ -0.81
YCP4YCR004C HGH1P48362 394 aaKnown RBP10.01□□□□□ -0.81
YCP4YCR004C AHC1Q12433 566 aa10.01□□□□□ -0.81
YCP4YCR004C YMR084WA2P2R3 262 aa10□□□□□ -0.81
YCP4YCR004C GPB2P39717 880 aa10□□□□□ -0.81
YCP4YCR004C AFG3P39925 761 aa10□□□□□ -0.81
YCP4YCR004C YPL260WQ08977 551 aa10□□□□□ -0.81
YCP4YCR004C PRE8P23639 250 aa9.99□□□□□ -0.81
YCP4YCR004C RGT1P32862 1170 aa9.99□□□□□ -0.81
YCP4YCR004C GEF1P37020 779 aa9.99□□□□□ -0.81
YCP4YCR004C MSC7P38694 644 aa9.99□□□□□ -0.81
YCP4YCR004C CDC45Q08032 650 aa9.99□□□□□ -0.81
YCP4YCR004C YKR018CP36114 725 aa9.98□□□□□ -0.81
YCP4YCR004C DUS4Q06063 367 aa9.98□□□□□ -0.81
YCP4YCR004C SRM1P21827 482 aa9.97□□□□□ -0.81
YCP4YCR004C TFA1P36100 482 aa9.97□□□□□ -0.81
YCP4YCR004C KSP1P38691 1029 aaKnown RBP9.97□□□□□ -0.81
YCP4YCR004C SPO1P53541 631 aa9.97□□□□□ -0.81
YCP4YCR004C RMD1Q03441 430 aa9.97□□□□□ -0.81
YCP4YCR004C ECM29P38737 1868 aa9.96□□□□□ -0.81
YCP4YCR004C GCD7P32502 381 aaPredicted RBP9.96□□□□□ -0.82
YCP4YCR004C SRP40P32583 406 aaPredicted RBP9.96□□□□□ -0.82
YCP4YCR004C TOM71P38825 639 aaKnown RBP9.96□□□□□ -0.82
YCP4YCR004C CDC19P00549 500 aaKnown RBP9.95□□□□□ -0.82
YCP4YCR004C BCS1P32839 456 aa9.95□□□□□ -0.82
YCP4YCR004C KTR2P33550 425 aa9.95□□□□□ -0.82
YCP4YCR004C NPL4P33755 580 aa9.95□□□□□ -0.82
YCP4YCR004C BUL2Q03758 920 aaKnown RBP9.95□□□□□ -0.82
YCP4YCR004C TUS1Q06412 1307 aa9.95□□□□□ -0.82
YCP4YCR004C HIP1P06775 603 aa9.94□□□□□ -0.82
YCP4YCR004C DBP1P24784 617 aaKnown RBP9.94□□□□□ -0.82
YCP4YCR004C FPR3P38911 411 aaKnown RBP9.94□□□□□ -0.82
YCP4YCR004C IRC8P47046 822 aa9.94□□□□□ -0.82
YCP4YCR004C ENP2P48234 707 aaKnown RBP9.94□□□□□ -0.82
YCP4YCR004C YGL242CP53066 181 aa9.94□□□□□ -0.82
YCP4YCR004C TGL3P40308 642 aa9.93□□□□□ -0.82
YCP4YCR004C YIL092WP40497 633 aa9.93□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms