RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	RSC6	P25632	483 aa		7.84	□□□□□ -1.15
SLX1	YBR228W	COQ2	P32378	372 aa		7.84	□□□□□ -1.15
SLX1	YBR228W	MAC1	P35192	417 aa		7.84	□□□□□ -1.15
SLX1	YBR228W	TFA2	P36145	328 aa		7.84	□□□□□ -1.15
SLX1	YBR228W	PAN5	P38787	379 aa		7.84	□□□□□ -1.15
SLX1	YBR228W	BIO5	P53744	561 aa	Known RBP	7.84	□□□□□ -1.15
SLX1	YBR228W	DSE4	P53753	1117 aa		7.84	□□□□□ -1.15
SLX1	YBR228W	GLT1	Q12680	2145 aa	Known RBP	7.84	□□□□□ -1.16
SLX1	YBR228W	ALO1	P54783	526 aa	Known RBP	7.83	□□□□□ -1.16
SLX1	YBR228W	QDR1	P40475	563 aa		7.82	□□□□□ -1.16
SLX1	YBR228W	NEO1	P40527	1151 aa		7.82	□□□□□ -1.16
SLX1	YBR228W	TY1A-NL1	Q12391	440 aa	Known RBP	7.82	□□□□□ -1.16
SLX1	YBR228W	GUP1	P53154	560 aa		7.81	□□□□□ -1.16
SLX1	YBR228W	SOG2	Q08817	791 aa		7.8	□□□□□ -1.16
SLX1	YBR228W	AKR1	P39010	764 aa		7.79	□□□□□ -1.16
SLX1	YBR228W	YJR124C	P47159	448 aa		7.79	□□□□□ -1.16
SLX1	YBR228W	PYC2	P32327	1180 aa	Known RBP	7.78	□□□□□ -1.16
SLX1	YBR228W	PGM1	P33401	570 aa	Known RBP	7.78	□□□□□ -1.16
SLX1	YBR228W	LEM3	P42838	414 aa		7.78	□□□□□ -1.16
SLX1	YBR228W	OMA1	P36163	345 aa		7.77	□□□□□ -1.17
SLX1	YBR228W	UFD2	P54860	961 aa		7.77	□□□□□ -1.17
SLX1	YBR228W	SPO71	Q03868	1245 aa		7.77	□□□□□ -1.17
SLX1	YBR228W	MAE1	P36013	669 aa	Known RBP	7.76	□□□□□ -1.17
SLX1	YBR228W	KAE1	P36132	386 aa		7.76	□□□□□ -1.17
SLX1	YBR228W	YNR065C	P53751	1116 aa		7.76	□□□□□ -1.17
SLX1	YBR228W	POL5	P39985	1022 aa	Known RBP	7.75	□□□□□ -1.17
SLX1	YBR228W	ATG1	P53104	897 aa		7.75	□□□□□ -1.17
SLX1	YBR228W	NAM7	P30771	971 aa	Known RBP	7.74	□□□□□ -1.17
SLX1	YBR228W	ECM2	P38241	364 aa	Known RBP	7.74	□□□□□ -1.17
SLX1	YBR228W	ELG1	Q12050	791 aa		7.74	□□□□□ -1.17
SLX1	YBR228W	GLO4	Q12320	285 aa		7.74	□□□□□ -1.17
SLX1	YBR228W	SAF1	P38352	637 aa		7.73	□□□□□ -1.17
SLX1	YBR228W	FET4	P40988	552 aa		7.73	□□□□□ -1.17
SLX1	YBR228W	REC8	Q12188	680 aa		7.73	□□□□□ -1.17
SLX1	YBR228W	YLR122C	Q12312	125 aa		7.73	□□□□□ -1.17
SLX1	YBR228W	CHS2	P14180	963 aa		7.72	□□□□□ -1.17
SLX1	YBR228W	CDC3	P32457	520 aa	Known RBP	7.72	□□□□□ -1.17
SLX1	YBR228W	GRS1	P38088	690 aa	Known RBP	7.72	□□□□□ -1.17
SLX1	YBR228W	HAS1	Q03532	505 aa	Known RBP	7.72	□□□□□ -1.17
SLX1	YBR228W	ERS1	P17261	260 aa		7.71	□□□□□ -1.18
SLX1	YBR228W	GEF1	P37020	779 aa		7.71	□□□□□ -1.18
SLX1	YBR228W	YGR130C	P53278	816 aa		7.7	□□□□□ -1.18
SLX1	YBR228W	YMR074C	Q04773	145 aa		7.7	□□□□□ -1.18
SLX1	YBR228W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	7.7	□□□□□ -1.18	not detected
SLX1	YBR228W	MED7	Q08278	222 aa		7.7	□□□□□ -1.18
SLX1	YBR228W	TRP3	P00937	484 aa		7.69	□□□□□ -1.18
SLX1	YBR228W	ACF4	P47129	309 aa		7.69	□□□□□ -1.18
SLX1	YBR228W	KIP3	P53086	805 aa	Known RBP	7.69	□□□□□ -1.18
SLX1	YBR228W	CTR9	P89105	1077 aa		7.69	□□□□□ -1.18
SLX1	YBR228W	TRS120	Q04183	1289 aa		7.69	□□□□□ -1.18
SLX1	YBR228W	HVG1	P0CE11	249 aa		7.68	□□□□□ -1.18
SLX1	YBR228W	YKR073C	P36153	106 aa		7.68	□□□□□ -1.18
SLX1	YBR228W	INP52	P50942	1183 aa		7.68	□□□□□ -1.18
SLX1	YBR228W	LIP5	P32875	414 aa		7.67	□□□□□ -1.18
SLX1	YBR228W	NCE103	P53615	221 aa		7.67	□□□□□ -1.18
SLX1	YBR228W	RSC4	Q02206	625 aa		7.67	□□□□□ -1.18
SLX1	YBR228W	HAT1	Q12341	374 aa		7.67	□□□□□ -1.18
SLX1	YBR228W	YBL113C	Q7M4S9	792 aa		7.67	□□□□□ -1.18
SLX1	YBR228W	COB	P00163	385 aa		7.66	□□□□□ -1.18
SLX1	YBR228W	TOS1	P38288	455 aa		7.66	□□□□□ -1.18
SLX1	YBR228W	ERP5	P38819	212 aa		7.66	□□□□□ -1.18
SLX1	YBR228W	FAR11	P53917	953 aa		7.66	□□□□□ -1.18
SLX1	YBR228W	YNL011C	P53980	444 aa		7.66	□□□□□ -1.18
SLX1	YBR228W	BSC2	Q05611	235 aa		7.66	□□□□□ -1.18
SLX1	YBR228W	YHL008C	P38750	627 aa		7.65	□□□□□ -1.18
SLX1	YBR228W	TRL1	P09880	827 aa	Known RBP	7.64	□□□□□ -1.19
SLX1	YBR228W	CYC7	P00045	113 aa		7.62	□□□□□ -1.19
SLX1	YBR228W	NPR1	P22211	790 aa		7.62	□□□□□ -1.19
SLX1	YBR228W	CDC55	Q00362	526 aa		7.62	□□□□□ -1.19
SLX1	YBR228W	MDJ2	P42834	146 aa		7.61	□□□□□ -1.19
SLX1	YBR228W	GIC2	Q06648	383 aa		7.61	□□□□□ -1.19
SLX1	YBR228W	YOR223W	Q12015	292 aa		7.61	□□□□□ -1.19
SLX1	YBR228W	CMR1	Q12510	522 aa	Known RBP	7.61	□□□□□ -1.19
SLX1	YBR228W	MNL2	Q12205	849 aa		7.6	□□□□□ -1.19
SLX1	YBR228W	FRT1	Q99332	602 aa		7.6	□□□□□ -1.19
SLX1	YBR228W	DUR3	P33413	735 aa		7.59	□□□□□ -1.19
SLX1	YBR228W	RIM11	P38615	370 aa		7.59	□□□□□ -1.19
SLX1	YBR228W	SPO74	P45819	413 aa		7.59	□□□□□ -1.19
SLX1	YBR228W	INP54	Q08227	384 aa	Known RBP	7.59	□□□□□ -1.19
SLX1	YBR228W	NUT2	Q06213	157 aa		7.58	□□□□□ -1.2
SLX1	YBR228W	YLL054C	Q12244	843 aa		7.58	□□□□□ -1.2
SLX1	YBR228W	FLP1	P03870	423 aa		7.57	□□□□□ -1.2
SLX1	YBR228W	HTS1	P07263	546 aa	Known RBP	7.57	□□□□□ -1.2
SLX1	YBR228W	MSB1	P21339	1137 aa	Known RBP	7.57	□□□□□ -1.2
SLX1	YBR228W	DOT1	Q04089	582 aa	Known RBP	7.57	□□□□□ -1.2
SLX1	YBR228W	YIG1	Q08956	461 aa		7.57	□□□□□ -1.2
SLX1	YBR228W	GPT2	P36148	743 aa		7.56	□□□□□ -1.2
SLX1	YBR228W	GCV1	P48015	400 aa		7.56	□□□□□ -1.2
SLX1	YBR228W	MSH6	Q03834	1242 aa		7.56	□□□□□ -1.2
SLX1	YBR228W	BRE4	Q07660	1125 aa		7.56	□□□□□ -1.2
SLX1	YBR228W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	7.55	□□□□□ -1.2	RIP-Chip
SLX1	YBR228W	MON1	P53129	644 aa		7.55	□□□□□ -1.2
SLX1	YBR228W	PMT7	Q06644	662 aa		7.54	□□□□□ -1.2
SLX1	YBR228W	NOC3	Q07896	663 aa	Predicted RBP	7.54	□□□□□ -1.2
SLX1	YBR228W	ALG6	Q12001	544 aa	Known RBP	7.54	□□□□□ -1.2
SLX1	YBR228W	MCM5	P29496	775 aa	Known RBP	7.53	□□□□□ -1.2
SLX1	YBR228W	WHI3	P34761	661 aa	Known RBP	7.53	□□□□□ -1.2
SLX1	YBR228W	MMM1	P41800	426 aa		7.53	□□□□□ -1.2
SLX1	YBR228W	CTH1	P47976	325 aa		7.53	□□□□□ -1.2
SLX1	YBR228W	NUT1	P53114	1132 aa		7.53	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms