RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	GUP1	P53154	560 aa		7.73	□□□□□ -1.17
UBS1	YBR165W	CTR9	P89105	1077 aa		7.73	□□□□□ -1.17
UBS1	YBR165W	YDR215C	Q12240	137 aa		7.73	□□□□□ -1.17
UBS1	YBR165W	YCK2	P23292	546 aa	Known RBP	7.72	□□□□□ -1.17
UBS1	YBR165W	STM1	P39015	273 aa	Known RBP	7.72	□□□□□ -1.17
UBS1	YBR165W	GIP2	P40036	548 aa		7.72	□□□□□ -1.17
UBS1	YBR165W	GPI13	Q07830	1017 aa		7.72	□□□□□ -1.17
UBS1	YBR165W	HVG1	P0CE11	249 aa		7.71	□□□□□ -1.18
UBS1	YBR165W	AMN1	P38285	549 aa	Predicted RBP	7.71	□□□□□ -1.18
UBS1	YBR165W	YHL050C	P38721	697 aa		7.71	□□□□□ -1.18
UBS1	YBR165W	YHR219W	P38900	624 aa		7.71	□□□□□ -1.18
UBS1	YBR165W	LEM3	P42838	414 aa		7.71	□□□□□ -1.18
UBS1	YBR165W	TY4B-P	A0A0B7P3V8	1104 aa		7.7	□□□□□ -1.18
UBS1	YBR165W	BUD9	P53226	547 aa		7.7	□□□□□ -1.18
UBS1	YBR165W	SOK2	P53438	785 aa	Predicted RBP	7.7	□□□□□ -1.18
UBS1	YBR165W	BSC2	Q05611	235 aa		7.7	□□□□□ -1.18
UBS1	YBR165W	GLO4	Q12320	285 aa		7.7	□□□□□ -1.18
UBS1	YBR165W	TY4A-H	Q6Q5P6	413 aa		7.7	□□□□□ -1.18
UBS1	YBR165W	COB	P00163	385 aa		7.69	□□□□□ -1.18
UBS1	YBR165W	SLN1	P39928	1220 aa	Predicted RBP	7.68	□□□□□ -1.18
UBS1	YBR165W	TED1	P40533	473 aa		7.68	□□□□□ -1.18
UBS1	YBR165W	CCT8	P47079	568 aa	Known RBP	7.68	□□□□□ -1.18
UBS1	YBR165W	PPX1	P38698	397 aa		7.67	□□□□□ -1.18
UBS1	YBR165W	RRM3	P38766	723 aa		7.67	□□□□□ -1.18
UBS1	YBR165W	YJR124C	P47159	448 aa		7.67	□□□□□ -1.18
UBS1	YBR165W	YNR065C	P53751	1116 aa		7.67	□□□□□ -1.18
UBS1	YBR165W	MSH6	Q03834	1242 aa		7.67	□□□□□ -1.18
UBS1	YBR165W	MSC6	Q08818	692 aa	Known RBP	7.67	□□□□□ -1.18
UBS1	YBR165W	LSB3	P43603	459 aa	Known RBP	7.66	□□□□□ -1.18
UBS1	YBR165W	FLP1	P03870	423 aa		7.65	□□□□□ -1.18
UBS1	YBR165W	AI3	P03877	415 aa		7.65	□□□□□ -1.18
UBS1	YBR165W	SFA1	P32771	386 aa		7.65	□□□□□ -1.18
UBS1	YBR165W	DUR3	P33413	735 aa		7.65	□□□□□ -1.18
UBS1	YBR165W	PRY1	P47032	299 aa		7.65	□□□□□ -1.18
UBS1	YBR165W	RIM11	P38615	370 aa		7.64	□□□□□ -1.19
UBS1	YBR165W	PAN5	P38787	379 aa		7.64	□□□□□ -1.19
UBS1	YBR165W	SEN54	Q02825	467 aa	Predicted RBP	7.64	□□□□□ -1.19
UBS1	YBR165W	PRP5	P21372	849 aa	Predicted RBP	7.63	□□□□□ -1.19
UBS1	YBR165W	TAT1	P38085	619 aa		7.63	□□□□□ -1.19
UBS1	YBR165W	YHL008C	P38750	627 aa		7.63	□□□□□ -1.19
UBS1	YBR165W	POL5	P39985	1022 aa	Known RBP	7.63	□□□□□ -1.19
UBS1	YBR165W	LSB6	P42951	607 aa		7.63	□□□□□ -1.19
UBS1	YBR165W	DSE4	P53753	1117 aa		7.63	□□□□□ -1.19
UBS1	YBR165W	SAC7	P17121	654 aa		7.62	□□□□□ -1.19
UBS1	YBR165W	SEC20	P28791	383 aa		7.62	□□□□□ -1.19
UBS1	YBR165W	ECM2	P38241	364 aa	Known RBP	7.62	□□□□□ -1.19
UBS1	YBR165W	SAP155	P43612	1002 aa		7.62	□□□□□ -1.19
UBS1	YBR165W	SAM37	P50110	327 aa		7.62	□□□□□ -1.19
UBS1	YBR165W	HAS1	Q03532	505 aa	Known RBP	7.62	□□□□□ -1.19
UBS1	YBR165W	SPO71	Q03868	1245 aa		7.62	□□□□□ -1.19
UBS1	YBR165W	GAS5	Q08193	484 aa		7.62	□□□□□ -1.19
UBS1	YBR165W	CMR1	Q12510	522 aa	Known RBP	7.62	□□□□□ -1.19
UBS1	YBR165W	NPR1	P22211	790 aa		7.61	□□□□□ -1.19
UBS1	YBR165W	FET4	P40988	552 aa		7.61	□□□□□ -1.19
UBS1	YBR165W	NOC3	Q07896	663 aa	Predicted RBP	7.61	□□□□□ -1.19
UBS1	YBR165W	NOP8	Q08287	484 aa	Predicted RBP	7.61	□□□□□ -1.19
UBS1	YBR165W	TY1A-NL1	Q12391	440 aa	Known RBP	7.61	□□□□□ -1.19
UBS1	YBR165W	PHO4	P07270	312 aa	Known RBP	7.6	□□□□□ -1.19
UBS1	YBR165W	MET4	P32389	672 aa		7.6	□□□□□ -1.19
UBS1	YBR165W	NEO1	P40527	1151 aa		7.6	□□□□□ -1.19
UBS1	YBR165W	ARI1	P53111	347 aa	Known RBP	7.6	□□□□□ -1.19
UBS1	YBR165W	NUT1	P53114	1132 aa		7.6	□□□□□ -1.19
UBS1	YBR165W	YML020W	Q03722	664 aa		7.6	□□□□□ -1.19
UBS1	YBR165W	INP54	Q08227	384 aa	Known RBP	7.6	□□□□□ -1.19
UBS1	YBR165W	WHI5	Q12416	295 aa		7.6	□□□□□ -1.19
UBS1	YBR165W	MCA1	Q08601	432 aa		7.59	□□□□□ -1.19
UBS1	YBR165W	SLD2	P34252	453 aa		7.58	□□□□□ -1.2
UBS1	YBR165W	CIC1	P38779	376 aa	Known RBP	7.58	□□□□□ -1.2
UBS1	YBR165W	IPL1	P38991	367 aa		7.58	□□□□□ -1.2
UBS1	YBR165W	GCD6	P32501	712 aa	Known RBP	7.57	□□□□□ -1.2
UBS1	YBR165W	VPS35	P34110	944 aa		7.57	□□□□□ -1.2
UBS1	YBR165W	MAE1	P36013	669 aa	Known RBP	7.57	□□□□□ -1.2
UBS1	YBR165W	PMT7	Q06644	662 aa		7.57	□□□□□ -1.2
UBS1	YBR165W	ELG1	Q12050	791 aa		7.57	□□□□□ -1.2
UBS1	YBR165W	RVS167	P39743	482 aa	Known RBP	7.56	□□□□□ -1.2
UBS1	YBR165W	YPL034W	Q03083	165 aa		7.56	□□□□□ -1.2
UBS1	YBR165W	YCS4	Q06156	1176 aa		7.56	□□□□□ -1.2
UBS1	YBR165W	HTS1	P07263	546 aa	Known RBP	7.55	□□□□□ -1.2
UBS1	YBR165W	RSC6	P25632	483 aa		7.55	□□□□□ -1.2
UBS1	YBR165W	PGM1	P33401	570 aa	Known RBP	7.55	□□□□□ -1.2
UBS1	YBR165W	YAF9	P53930	226 aa		7.54	□□□□□ -1.2
UBS1	YBR165W	YIG1	Q08956	461 aa		7.54	□□□□□ -1.2
UBS1	YBR165W	DAK2	P43550	591 aa		7.53	□□□□□ -1.2
UBS1	YBR165W	ERS1	P17261	260 aa		7.52	□□□□□ -1.21
UBS1	YBR165W	THI12	P42883	340 aa		7.52	□□□□□ -1.21
UBS1	YBR165W	THI5	P43534	340 aa		7.52	□□□□□ -1.21
UBS1	YBR165W	THI11	P47183	340 aa		7.52	□□□□□ -1.21
UBS1	YBR165W	NCE103	P53615	221 aa		7.52	□□□□□ -1.21
UBS1	YBR165W	FAR11	P53917	953 aa		7.52	□□□□□ -1.21
UBS1	YBR165W	THI13	Q07748	340 aa		7.52	□□□□□ -1.21
UBS1	YBR165W	GCV1	P48015	400 aa		7.51	□□□□□ -1.21
UBS1	YBR165W	REC8	Q12188	680 aa		7.51	□□□□□ -1.21
UBS1	YBR165W	MCM5	P29496	775 aa	Known RBP	7.5	□□□□□ -1.21
UBS1	YBR165W	MON1	P53129	644 aa		7.5	□□□□□ -1.21
UBS1	YBR165W	MEC3	Q02574	474 aa		7.49	□□□□□ -1.21
UBS1	YBR165W	PRP40	P33203	583 aa	Known RBP	7.48	□□□□□ -1.21
UBS1	YBR165W	KIP3	P53086	805 aa	Known RBP	7.48	□□□□□ -1.21
UBS1	YBR165W	UTP22	P53254	1237 aa	Predicted RBP	7.48	□□□□□ -1.21
UBS1	YBR165W	YLL054C	Q12244	843 aa		7.48	□□□□□ -1.21
UBS1	YBR165W	HEM3	P28789	327 aa		7.47	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms