RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	LIAT1	Q6ZQX7	453 aa		11.9	□□□□□ -0.5
PAX6-267	ENST00000640251	EMID1	Q96A84	441 aa	Predicted RBP	11.9	□□□□□ -0.5
PAX6-267	ENST00000640251	IFT140	Q96RY7	1462 aa		11.89	□□□□□ -0.51
PAX6-267	ENST00000640251	EIF4G3	O43432	1585 aa	Known RBP	11.89	□□□□□ -0.51
PAX6-267	ENST00000640251	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.88	□□□□□ -0.51
PAX6-267	ENST00000640251	TARBP1	Q13395	1621 aa	Known RBP	11.87	□□□□□ -0.51
PAX6-267	ENST00000640251	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.87	□□□□□ -0.51
PAX6-267	ENST00000640251	NUDT12	Q9BQG2	462 aa		11.87	□□□□□ -0.51
PAX6-267	ENST00000640251	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
PAX6-267	ENST00000640251		V9GY48	417 aa	Predicted RBP	11.87	□□□□□ -0.51
PAX6-267	ENST00000640251	POLA1	P09884	1462 aa	Predicted RBP	11.86	□□□□□ -0.51
PAX6-267	ENST00000640251	ZBTB24	O43167	697 aa	Predicted RBP	11.85	□□□□□ -0.51
PAX6-267	ENST00000640251	CHD1	O14646	1710 aa		11.85	□□□□□ -0.51
PAX6-267	ENST00000640251	DESI1	Q6ICB0	168 aa		11.84	□□□□□ -0.51
PAX6-267	ENST00000640251	GOPC	Q9HD26	462 aa		11.84	□□□□□ -0.51
PAX6-267	ENST00000640251	RIMBP3C	A6NJZ7	1639 aa		11.83	□□□□□ -0.52
PAX6-267	ENST00000640251	RIMBP3B	A6NNM3	1639 aa		11.83	□□□□□ -0.52
PAX6-267	ENST00000640251	TDRD9	Q8NDG6	1382 aa	Known RBP	11.83	□□□□□ -0.52
PAX6-267	ENST00000640251	RIMBP3	Q9UFD9	1639 aa		11.83	□□□□□ -0.52
PAX6-267	ENST00000640251	CUX1	P39880	1505 aa		11.83	□□□□□ -0.52
PAX6-267	ENST00000640251	SPRYD7	Q5W111	196 aa		11.83	□□□□□ -0.52
PAX6-267	ENST00000640251	PER1	O15534	1290 aa	Predicted RBP	11.82	□□□□□ -0.52
PAX6-267	ENST00000640251	CCNYL3	P0C7X3	344 aa		11.82	□□□□□ -0.52
PAX6-267	ENST00000640251	PTPRN	Q16849	979 aa		11.82	□□□□□ -0.52
PAX6-267	ENST00000640251	FGD5	Q6ZNL6	1462 aa		11.82	□□□□□ -0.52
PAX6-267	ENST00000640251	RPIA	P49247	311 aa		11.81	□□□□□ -0.52
PAX6-267	ENST00000640251	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.81	□□□□□ -0.52
PAX6-267	ENST00000640251	LYPD8	Q6UX82	237 aa		11.81	□□□□□ -0.52
PAX6-267	ENST00000640251	HELB	Q8NG08	1087 aa	Predicted RBP	11.81	□□□□□ -0.52
PAX6-267	ENST00000640251	CTH	P32929	405 aa		11.8	□□□□□ -0.52
PAX6-267	ENST00000640251	SOGA1	O94964	1423 aa		11.79	□□□□□ -0.52
PAX6-267	ENST00000640251	CD2BP2	O95400	341 aa	Known RBP	11.79	□□□□□ -0.52
PAX6-267	ENST00000640251	CTDSPL2	Q05D32	466 aa		11.79	□□□□□ -0.52
PAX6-267	ENST00000640251	ZNF697	Q5TEC3	545 aa		11.79	□□□□□ -0.52
PAX6-267	ENST00000640251	PPP2R2D	Q66LE6	453 aa		11.79	□□□□□ -0.52
PAX6-267	ENST00000640251	ZNF598	Q86UK7	904 aa	Known RBP	11.79	□□□□□ -0.52
PAX6-267	ENST00000640251	EVA1B	Q9NVM1	165 aa		11.79	□□□□□ -0.52
PAX6-267	ENST00000640251	ABCC8	Q09428	1581 aa		11.79	□□□□□ -0.52
PAX6-267	ENST00000640251	AP1G2	O75843	785 aa		11.78	□□□□□ -0.52
PAX6-267	ENST00000640251	RFC5	P40937	340 aa		11.77	□□□□□ -0.53
PAX6-267	ENST00000640251	KCNH2	Q12809	1159 aa		11.77	□□□□□ -0.53
PAX6-267	ENST00000640251	TRIM32	Q13049	653 aa		11.77	□□□□□ -0.53
PAX6-267	ENST00000640251	ARHGEF11	O15085	1522 aa		11.76	□□□□□ -0.53
PAX6-267	ENST00000640251	MAP10	Q9P2G4	905 aa		11.76	□□□□□ -0.53
PAX6-267	ENST00000640251	FOXC1	Q12948	553 aa		11.75	□□□□□ -0.53
PAX6-267	ENST00000640251	IRX2	Q9BZI1	471 aa	Predicted RBP	11.75	□□□□□ -0.53
PAX6-267	ENST00000640251	SNAPC4	Q5SXM2	1469 aa		11.75	□□□□□ -0.53
PAX6-267	ENST00000640251	UNC93B1	Q9H1C4	597 aa		11.74	□□□□□ -0.53
PAX6-267	ENST00000640251	LRRN4	Q8WUT4	740 aa		11.73	□□□□□ -0.53
PAX6-267	ENST00000640251	GFRA3	O60609	400 aa		11.72	□□□□□ -0.53
PAX6-267	ENST00000640251	F12	P00748	615 aa	Predicted RBP	11.72	□□□□□ -0.53
PAX6-267	ENST00000640251	CYB5RL	Q6IPT4	315 aa		11.72	□□□□□ -0.53
PAX6-267	ENST00000640251	PDZRN3	Q9UPQ7	1066 aa		11.72	□□□□□ -0.53
PAX6-267	ENST00000640251	WDR97	A6NE52	1622 aa		11.71	□□□□□ -0.53
PAX6-267	ENST00000640251	TNFRSF10A	O00220	468 aa		11.71	□□□□□ -0.53
PAX6-267	ENST00000640251	LINC01559	Q495D7	138 aa		11.71	□□□□□ -0.53
PAX6-267	ENST00000640251	TRIM67	Q6ZTA4	783 aa		11.7	□□□□□ -0.54
PAX6-267	ENST00000640251	BAP1	Q92560	729 aa		11.7	□□□□□ -0.54
PAX6-267	ENST00000640251	SKOR1	P84550	965 aa		11.69	□□□□□ -0.54
PAX6-267	ENST00000640251	ARAP1	Q96P48	1450 aa		11.69	□□□□□ -0.54
PAX6-267	ENST00000640251	USP17L8	P0C7I0	530 aa		11.68	□□□□□ -0.54
PAX6-267	ENST00000640251	TMEM259	Q4ZIN3	620 aa		11.68	□□□□□ -0.54
PAX6-267	ENST00000640251	PKD2L1	Q9P0L9	805 aa		11.68	□□□□□ -0.54
PAX6-267	ENST00000640251	PBRM1	Q86U86	1689 aa		11.68	□□□□□ -0.54
PAX6-267	ENST00000640251	GDF9	O60383	454 aa		11.67	□□□□□ -0.54
PAX6-267	ENST00000640251	SYNJ1	O43426	1573 aa		11.67	□□□□□ -0.54
PAX6-267	ENST00000640251	SH3BP2	P78314	561 aa		11.66	□□□□□ -0.54
PAX6-267	ENST00000640251	WNT7B	P56706	349 aa		11.65	□□□□□ -0.54
PAX6-267	ENST00000640251	NR6A1	Q15406	480 aa		11.65	□□□□□ -0.54
PAX6-267	ENST00000640251	RC3H1	Q5TC82	1133 aa	Known RBP	11.65	□□□□□ -0.54
PAX6-267	ENST00000640251	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.65	□□□□□ -0.54
PAX6-267	ENST00000640251	HMX1	Q9NP08	348 aa	Predicted RBP	11.65	□□□□□ -0.54
PAX6-267	ENST00000640251	CLASP1	Q7Z460	1538 aa		11.64	□□□□□ -0.55
PAX6-267	ENST00000640251	GRIN2B	Q13224	1484 aa		11.63	□□□□□ -0.55
PAX6-267	ENST00000640251	GAPVD1	Q14C86	1478 aa		11.63	□□□□□ -0.55
PAX6-267	ENST00000640251	WNT7A	O00755	349 aa		11.63	□□□□□ -0.55
PAX6-267	ENST00000640251	ZNF511	Q8NB15	262 aa		11.63	□□□□□ -0.55
PAX6-267	ENST00000640251	MRGPRX2	Q96LB1	330 aa		11.63	□□□□□ -0.55
PAX6-267	ENST00000640251	ABCA5	Q8WWZ7	1642 aa		11.63	□□□□□ -0.55
PAX6-267	ENST00000640251	NRG2	O14511	850 aa	Predicted RBP	11.62	□□□□□ -0.55
PAX6-267	ENST00000640251	PRR20E	P86478	221 aa		11.62	□□□□□ -0.55
PAX6-267	ENST00000640251	PRR20C	P86479	221 aa		11.62	□□□□□ -0.55
PAX6-267	ENST00000640251	PRR20D	P86480	221 aa		11.62	□□□□□ -0.55
PAX6-267	ENST00000640251	PRR20B	P86481	221 aa		11.62	□□□□□ -0.55
PAX6-267	ENST00000640251	PRR20A	P86496	221 aa		11.62	□□□□□ -0.55
PAX6-267	ENST00000640251	EPS8L1	Q8TE68	723 aa		11.62	□□□□□ -0.55
PAX6-267	ENST00000640251	ABCA10	Q8WWZ4	1543 aa		11.61	□□□□□ -0.55
PAX6-267	ENST00000640251	EHBP1	Q8NDI1	1231 aa		11.61	□□□□□ -0.55
PAX6-267	ENST00000640251	ERCC6L2	Q5T890	1561 aa		11.6	□□□□□ -0.55
PAX6-267	ENST00000640251	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.6	□□□□□ -0.55
PAX6-267	ENST00000640251	LAPTM4A	Q15012	233 aa		11.6	□□□□□ -0.55
PAX6-267	ENST00000640251	AGER	Q15109	404 aa		11.6	□□□□□ -0.55
PAX6-267	ENST00000640251	CYP4X1	Q8N118	509 aa		11.6	□□□□□ -0.55
PAX6-267	ENST00000640251	ARMC2	Q8NEN0	867 aa		11.6	□□□□□ -0.55
PAX6-267	ENST00000640251	FOXJ1	Q92949	421 aa		11.6	□□□□□ -0.55
PAX6-267	ENST00000640251	SYNJ2	O15056	1496 aa		11.59	□□□□□ -0.55
PAX6-267	ENST00000640251	BIVM-ERCC5	R4GMW8	1640 aa		11.59	□□□□□ -0.55
PAX6-267	ENST00000640251	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.59	□□□□□ -0.55
PAX6-267	ENST00000640251	TOP2B	Q02880	1626 aa		11.58	□□□□□ -0.56
PAX6-267	ENST00000640251	TTC24	A2A3L6	582 aa	Predicted RBP	11.58	□□□□□ -0.56

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