RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 CFAP99D6REC4 459 aa4.52□□□□□ -1.69
SCN8A-210ENST00000627665 ARHGAP33O14559 1287 aa4.52□□□□□ -1.69
SCN8A-210ENST00000627665 GUCA2AQ02747 115 aa4.52□□□□□ -1.69
SCN8A-210ENST00000627665 FUT2Q10981 343 aa4.52□□□□□ -1.69
SCN8A-210ENST00000627665 NR1H3Q13133 447 aa4.52□□□□□ -1.69
SCN8A-210ENST00000627665 NR6A1Q15406 480 aa4.52□□□□□ -1.69
SCN8A-210ENST00000627665 SND1Q7KZF4 910 aaKnown RBP eCLIP4.52□□□□□ -1.69
SCN8A-210ENST00000627665 ZBED2Q9BTP6 218 aa4.52□□□□□ -1.69
SCN8A-210ENST00000627665 MAFBQ9Y5Q3 323 aaPredicted RBP4.52□□□□□ -1.69
SCN8A-210ENST00000627665 MROH2BQ7Z745 1585 aa4.52□□□□□ -1.69
SCN8A-210ENST00000627665 ZBBXA8MT70 800 aa4.51□□□□□ -1.69
SCN8A-210ENST00000627665 C3orf80F5H4A9 247 aa4.51□□□□□ -1.69
SCN8A-210ENST00000627665 POTEB2H3BUK9 544 aa4.51□□□□□ -1.69
SCN8A-210ENST00000627665 LZTS3O60299 673 aaPredicted RBP4.51□□□□□ -1.69
SCN8A-210ENST00000627665 PBX2P40425 430 aa4.51□□□□□ -1.69
SCN8A-210ENST00000627665 SRPK2P78362 688 aaKnown RBP4.51□□□□□ -1.69
SCN8A-210ENST00000627665 ELOAQ14241 798 aaKnown RBP4.51□□□□□ -1.69
SCN8A-210ENST00000627665 ARMC2Q8NEN0 867 aa4.51□□□□□ -1.69
SCN8A-210ENST00000627665 IVNS1ABPQ9Y6Y0 642 aa4.51□□□□□ -1.69
SCN8A-210ENST00000627665 EIF4G3O43432 1585 aaKnown RBP4.5□□□□□ -1.69
SCN8A-210ENST00000627665 ERCC3P19447 782 aa4.5□□□□□ -1.69
SCN8A-210ENST00000627665 CDCA8Q53HL2 280 aa4.5□□□□□ -1.69
SCN8A-210ENST00000627665 LARP1Q6PKG0 1096 aaKnown RBP4.5□□□□□ -1.69
SCN8A-210ENST00000627665 LYPD8Q6UX82 237 aa4.5□□□□□ -1.69
SCN8A-210ENST00000627665 SAMD7Q7Z3H4 446 aa4.5□□□□□ -1.69
SCN8A-210ENST00000627665 STAC3Q96MF2 364 aa4.5□□□□□ -1.69
SCN8A-210ENST00000627665 BCL11AQ9H165 835 aa4.5□□□□□ -1.69
SCN8A-210ENST00000627665 SEPT9Q9UHD8 586 aaPredicted RBP4.5□□□□□ -1.69
SCN8A-210ENST00000627665 GNEQ9Y223 722 aaKnown RBP4.5□□□□□ -1.69
SCN8A-210ENST00000627665 RBM19Q9Y4C8 960 aaKnown RBP4.5□□□□□ -1.69
SCN8A-210ENST00000627665 AQRO60306 1485 aaKnown RBP eCLIP4.49□□□□□ -1.69
SCN8A-210ENST00000627665 CHD1O14646 1710 aa4.49□□□□□ -1.69
SCN8A-210ENST00000627665 ERBB3P21860 1342 aa4.49□□□□□ -1.69
SCN8A-210ENST00000627665 MMRN1Q13201 1228 aa4.49□□□□□ -1.69
SCN8A-210ENST00000627665 SLFNL1Q499Z3 407 aa4.49□□□□□ -1.69
SCN8A-210ENST00000627665 FOXD4L5Q5VV16 416 aaPredicted RBP4.49□□□□□ -1.69
SCN8A-210ENST00000627665 TBC1D9Q6ZT07 1266 aa4.49□□□□□ -1.69
SCN8A-210ENST00000627665 FOXD4L4Q8WXT5 416 aaPredicted RBP4.49□□□□□ -1.69
SCN8A-210ENST00000627665 HLA-CQ95604 372 aa4.49□□□□□ -1.69
SCN8A-210ENST00000627665 LRCH3Q96II8 777 aa4.49□□□□□ -1.69
SCN8A-210ENST00000627665 FKBPLQ9UIM3 349 aa4.49□□□□□ -1.69
SCN8A-210ENST00000627665 ATP5J2-PTCD1G3V325 749 aa4.48□□□□□ -1.69
SCN8A-210ENST00000627665 ACTN4O43707 911 aaKnown RBP4.48□□□□□ -1.69
SCN8A-210ENST00000627665 NR1I2O75469 434 aa4.48□□□□□ -1.69
SCN8A-210ENST00000627665 SKIP12755 728 aa4.48□□□□□ -1.69
SCN8A-210ENST00000627665 ARID4AP29374 1257 aaPredicted RBP4.48□□□□□ -1.69
SCN8A-210ENST00000627665 PTK2Q05397 1052 aa4.48□□□□□ -1.69
SCN8A-210ENST00000627665 PLEKHM2Q8IWE5 1019 aa4.48□□□□□ -1.69
SCN8A-210ENST00000627665 EPS8L1Q8TE68 723 aa4.48□□□□□ -1.69
SCN8A-210ENST00000627665 FBXO41Q8TF61 875 aa4.48□□□□□ -1.69
SCN8A-210ENST00000627665 CHMP7Q8WUX9 453 aaPredicted RBP4.48□□□□□ -1.69
SCN8A-210ENST00000627665 GPKOWQ92917 476 aaPredicted RBP eCLIP4.48□□□□□ -1.69
SCN8A-210ENST00000627665 UCN2Q96RP3 112 aa4.48□□□□□ -1.69
SCN8A-210ENST00000627665 USB1Q9BQ65 265 aaKnown RBP4.48□□□□□ -1.69
SCN8A-210ENST00000627665 SALL2Q9Y467 1007 aaPredicted RBP4.48□□□□□ -1.69
SCN8A-210ENST00000627665 GPSM3Q9Y4H4 160 aa4.48□□□□□ -1.69
SCN8A-210ENST00000627665 GAPVD1Q14C86 1478 aa4.48□□□□□ -1.69
SCN8A-210ENST00000627665 TMEM88BA6NKF7 163 aa4.47□□□□□ -1.69
SCN8A-210ENST00000627665 GOLGA8CPA6NN73 597 aa4.47□□□□□ -1.69
SCN8A-210ENST00000627665 PER1O15534 1290 aaPredicted RBP4.47□□□□□ -1.69
SCN8A-210ENST00000627665 GPR37L1O60883 481 aa4.47□□□□□ -1.69
SCN8A-210ENST00000627665 FMNL1O95466 1100 aaPredicted RBP4.47□□□□□ -1.69
SCN8A-210ENST00000627665 CTHP32929 405 aa4.47□□□□□ -1.69
SCN8A-210ENST00000627665 PSEN2P49810 448 aa4.47□□□□□ -1.69
SCN8A-210ENST00000627665 MORN1Q5T089 497 aa4.47□□□□□ -1.69
SCN8A-210ENST00000627665 TRIM50Q86XT4 487 aa4.47□□□□□ -1.69
SCN8A-210ENST00000627665 MRPL50Q8N5N7 158 aaKnown RBP4.47□□□□□ -1.69
SCN8A-210ENST00000627665 FAM200AQ8TCP9 573 aa4.47□□□□□ -1.69
SCN8A-210ENST00000627665 SYMPKQ92797 1274 aaKnown RBP4.47□□□□□ -1.69
SCN8A-210ENST00000627665 CDCA7Q9BWT1 371 aaPredicted RBP4.47□□□□□ -1.69
SCN8A-210ENST00000627665 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.47□□□□□ -1.69
SCN8A-210ENST00000627665 NOVA2Q9UNW9 492 aaKnown RBP4.47□□□□□ -1.69
SCN8A-210ENST00000627665 CLASP1Q7Z460 1538 aa4.46□□□□□ -1.69
SCN8A-210ENST00000627665 TOPBP1Q92547 1522 aa4.46□□□□□ -1.69
SCN8A-210ENST00000627665 SYNJ1O43426 1573 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 LMTK3Q96Q04 1460 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 USP17L3A6NCW0 530 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 USP17L4A6NCW7 530 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 FAM196BA6NMK8 535 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 USP17L5A8MUK1 530 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 PTPRNQ16849 979 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 MAP7D1Q3KQU3 841 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 NBPF14Q5TI25 921 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 USP17L2Q6R6M4 530 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 USP17L1Q7RTZ2 530 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 ZFRQ96KR1 1074 aaKnown RBP4.46□□□□□ -1.7
SCN8A-210ENST00000627665 VPS9D1Q9Y2B5 631 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 SLC27A5Q9Y2P5 690 aa4.46□□□□□ -1.7
SCN8A-210ENST00000627665 TK2O00142 265 aa4.45□□□□□ -1.7
SCN8A-210ENST00000627665 FBXO45P0C2W1 286 aa4.45□□□□□ -1.7
SCN8A-210ENST00000627665 RASA1P20936 1047 aa4.45□□□□□ -1.7
SCN8A-210ENST00000627665 ATP1A2P50993 1020 aa4.45□□□□□ -1.7
SCN8A-210ENST00000627665 PPP4CP60510 307 aa4.45□□□□□ -1.7
SCN8A-210ENST00000627665 KANK4Q5T7N3 995 aaPredicted RBP4.45□□□□□ -1.7
SCN8A-210ENST00000627665 RNF135Q8IUD6 432 aa4.45□□□□□ -1.7
SCN8A-210ENST00000627665 TRIM52Q96A61 297 aa4.45□□□□□ -1.7
SCN8A-210ENST00000627665 MKRN1Q9UHC7 482 aaKnown RBP4.45□□□□□ -1.7
SCN8A-210ENST00000627665 ABCC8Q09428 1581 aa4.44□□□□□ -1.7
SCN8A-210ENST00000627665 ERCC6L2Q5T890 1561 aa4.44□□□□□ -1.7
SCN8A-210ENST00000627665 SNAPC4Q5SXM2 1469 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms