RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 CHIC1Q5VXU3 224 aa9.8□□□□□ -0.84
SCN8A-210ENST00000627665 AEBP2Q6ZN18 517 aaPredicted RBP9.54□□□□□ -0.88
SCN8A-210ENST00000627665 POTEDQ86YR6 584 aa8.61□□□□□ -1.03
SCN8A-210ENST00000627665 PHF23Q9BUL5 403 aaPredicted RBP8.56□□□□□ -1.04
SCN8A-210ENST00000627665 PLPPR3Q6T4P5 718 aa8.21□□□□□ -1.1
SCN8A-210ENST00000627665 SENP3Q9H4L4 574 aaPredicted RBP8.21□□□□□ -1.1
SCN8A-210ENST00000627665 ADRA2BP18089 450 aa7.5□□□□□ -1.21
SCN8A-210ENST00000627665 FOXD1Q16676 465 aa7.46□□□□□ -1.22
SCN8A-210ENST00000627665 KCNA4P22459 653 aa7.44□□□□□ -1.22
SCN8A-210ENST00000627665 EHMT2Q96KQ7 1210 aa7.43□□□□□ -1.22
SCN8A-210ENST00000627665 PPP6R1Q9UPN7 881 aa7.42□□□□□ -1.22
SCN8A-210ENST00000627665 NCBP3Q53F19 620 aaKnown RBP7.28□□□□□ -1.24
SCN8A-210ENST00000627665 SLC4A1APQ9BWU0 796 aaKnown RBP7.24□□□□□ -1.25
SCN8A-210ENST00000627665 PPP4R3CPQ6ZMV5 832 aa7.23□□□□□ -1.25
SCN8A-210ENST00000627665 PIAS4Q8N2W9 510 aaPredicted RBP7.2□□□□□ -1.26
SCN8A-210ENST00000627665 CSRNP3Q8WYN3 585 aa7.12□□□□□ -1.27
SCN8A-210ENST00000627665 SCAF1Q9H7N4 1312 aaKnown RBP7.05□□□□□ -1.28
SCN8A-210ENST00000627665 NPM3O75607 178 aaKnown RBP7.01□□□□□ -1.29
SCN8A-210ENST00000627665 CNKSR2Q8WXI2 1034 aa6.98□□□□□ -1.29
SCN8A-210ENST00000627665 MSH5O43196 834 aa6.86□□□□□ -1.31
SCN8A-210ENST00000627665 FOXD4L1Q9NU39 408 aa6.81□□□□□ -1.32
SCN8A-210ENST00000627665 DNAJC5BQ9UF47 199 aa6.79□□□□□ -1.32
SCN8A-210ENST00000627665 ZBTB22O15209 634 aa6.77□□□□□ -1.33
SCN8A-210ENST00000627665 RNF216Q9NWF9 866 aaPredicted RBP6.74□□□□□ -1.33
SCN8A-210ENST00000627665 AMER1Q5JTC6 1135 aaPredicted RBP6.65□□□□□ -1.34
SCN8A-210ENST00000627665 MAPK8IP2Q13387 824 aaPredicted RBP6.64□□□□□ -1.35
SCN8A-210ENST00000627665 SLC24A1O60721 1099 aa6.6□□□□□ -1.35
SCN8A-210ENST00000627665 ATXN8OSP0DMR3 200 aa6.6□□□□□ -1.35
SCN8A-210ENST00000627665 HOXD11P31277 338 aaPredicted RBP6.57□□□□□ -1.36
SCN8A-210ENST00000627665 DMRT2Q9Y5R5 561 aa6.57□□□□□ -1.36
SCN8A-210ENST00000627665 MYCNP04198 464 aaPredicted RBP6.55□□□□□ -1.36
SCN8A-210ENST00000627665 CACNB1Q02641 598 aaPredicted RBP6.53□□□□□ -1.36
SCN8A-210ENST00000627665 RTN4Q9NQC3 1192 aaKnown RBP6.51□□□□□ -1.37
SCN8A-210ENST00000627665 POTEHQ6S545 545 aa6.49□□□□□ -1.37
SCN8A-210ENST00000627665 SLC4A2P04920 1241 aa6.48□□□□□ -1.37
SCN8A-210ENST00000627665 FKBP8Q14318 412 aa6.48□□□□□ -1.37
SCN8A-210ENST00000627665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.42□□□□□ -1.38
SCN8A-210ENST00000627665 HNRNPUL2Q1KMD3 747 aaKnown RBP6.42□□□□□ -1.38
SCN8A-210ENST00000627665 SAMD1Q6SPF0 538 aaPredicted RBP6.37□□□□□ -1.39
SCN8A-210ENST00000627665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.34□□□□□ -1.39
SCN8A-210ENST00000627665 DCAF8L1A6NGE4 600 aa6.32□□□□□ -1.4
SCN8A-210ENST00000627665 APLP2Q06481 763 aa6.31□□□□□ -1.4
SCN8A-210ENST00000627665 FBXO3Q9UK99 471 aa6.27□□□□□ -1.41
SCN8A-210ENST00000627665 ATF5Q9Y2D1 282 aaPredicted RBP6.2□□□□□ -1.42
SCN8A-210ENST00000627665 ZNF219Q9P2Y4 722 aaPredicted RBP6.18□□□□□ -1.42
SCN8A-210ENST00000627665 U3KPZ7 1027 aaPredicted RBP6.17□□□□□ -1.42
SCN8A-210ENST00000627665 SPDYE4A6NLX3 237 aa6.13□□□□□ -1.43
SCN8A-210ENST00000627665 FBLN2P98095 1184 aa6.13□□□□□ -1.43
SCN8A-210ENST00000627665 DCAF8L2P0C7V8 631 aa6.07□□□□□ -1.44
SCN8A-210ENST00000627665 PLCB2Q00722 1185 aa6.06□□□□□ -1.44
SCN8A-210ENST00000627665 VASPP50552 380 aaPredicted RBP6.05□□□□□ -1.44
SCN8A-210ENST00000627665 ZBTB12Q9Y330 459 aaPredicted RBP6.02□□□□□ -1.45
SCN8A-210ENST00000627665 HAP1P54257 671 aaPredicted RBP6.01□□□□□ -1.45
SCN8A-210ENST00000627665 PROM2Q8N271 834 aa6.01□□□□□ -1.45
SCN8A-210ENST00000627665 BCANQ96GW7 911 aa5.99□□□□□ -1.45
SCN8A-210ENST00000627665 TRHP20396 242 aaPredicted RBP5.98□□□□□ -1.45
SCN8A-210ENST00000627665 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.97□□□□□ -1.45
SCN8A-210ENST00000627665 MKRN4PQ13434 485 aaPredicted RBP5.96□□□□□ -1.46
SCN8A-210ENST00000627665 POLA2Q14181 598 aa5.96□□□□□ -1.46
SCN8A-210ENST00000627665 VSIG10Q8N0Z9 540 aa5.96□□□□□ -1.46
SCN8A-210ENST00000627665 IFNLR1Q8IU57 520 aaPredicted RBP5.95□□□□□ -1.46
SCN8A-210ENST00000627665 KLHL34Q8N239 644 aa5.95□□□□□ -1.46
SCN8A-210ENST00000627665 CAPN15O75808 1086 aa5.93□□□□□ -1.46
SCN8A-210ENST00000627665 SPOCK2Q92563 424 aa5.92□□□□□ -1.46
SCN8A-210ENST00000627665 STAG3Q9UJ98 1225 aa5.92□□□□□ -1.46
SCN8A-210ENST00000627665 BBXQ8WY36 941 aaPredicted RBP5.9□□□□□ -1.46
SCN8A-210ENST00000627665 PKD2Q13563 968 aa5.89□□□□□ -1.47
SCN8A-210ENST00000627665 PLEKHG5O94827 1062 aa5.88□□□□□ -1.47
SCN8A-210ENST00000627665 NISCHQ9Y2I1 1504 aa5.88□□□□□ -1.47
SCN8A-210ENST00000627665 ECM2O94769 699 aaPredicted RBP5.87□□□□□ -1.47
SCN8A-210ENST00000627665 SPINK5Q9NQ38 1064 aaPredicted RBP5.87□□□□□ -1.47
SCN8A-210ENST00000627665 C1QBPQ07021 282 aaKnown RBP5.86□□□□□ -1.47
SCN8A-210ENST00000627665 PLCD3Q8N3E9 789 aa5.86□□□□□ -1.47
SCN8A-210ENST00000627665 ZNF692Q9BU19 519 aaPredicted RBP5.85□□□□□ -1.47
SCN8A-210ENST00000627665 ZBTB47Q9UFB7 747 aaPredicted RBP5.85□□□□□ -1.47
SCN8A-210ENST00000627665 RNF39Q9H2S5 420 aa5.83□□□□□ -1.48
SCN8A-210ENST00000627665 PLSCR2Q9NRY7 297 aa5.83□□□□□ -1.48
SCN8A-210ENST00000627665 PAXIP1Q6ZW49 1069 aaPredicted RBP5.82□□□□□ -1.48
SCN8A-210ENST00000627665 MIER1Q8N108 512 aa5.82□□□□□ -1.48
SCN8A-210ENST00000627665 CFAP44Q96MT7 982 aa5.82□□□□□ -1.48
SCN8A-210ENST00000627665 TAOK2Q9UL54 1235 aa5.82□□□□□ -1.48
SCN8A-210ENST00000627665 SPDYE2BA6NHP3 402 aa5.81□□□□□ -1.48
SCN8A-210ENST00000627665 SPDYE6P0CI01 402 aa5.81□□□□□ -1.48
SCN8A-210ENST00000627665 SPDYE2Q495Y8 402 aa5.81□□□□□ -1.48
SCN8A-210ENST00000627665 SPRYD3Q8NCJ5 442 aa5.81□□□□□ -1.48
SCN8A-210ENST00000627665 ABCB7O75027 752 aa5.79□□□□□ -1.48
SCN8A-210ENST00000627665 TRIM41Q8WV44 630 aa5.79□□□□□ -1.48
SCN8A-210ENST00000627665 CIZ1Q9ULV3 898 aaPredicted RBP5.76□□□□□ -1.49
SCN8A-210ENST00000627665 PABPN1Q86U42 306 aaKnown RBP eCLIP5.74□□□□□ -1.49
SCN8A-210ENST00000627665 CHGAP10645 457 aaKnown RBP5.73□□□□□ -1.49
SCN8A-210ENST00000627665 PRKCSHP14314 528 aaPredicted RBP5.73□□□□□ -1.49
SCN8A-210ENST00000627665 NBR1Q14596 966 aa5.73□□□□□ -1.49
SCN8A-210ENST00000627665 TPRNQ4KMQ1 711 aa5.73□□□□□ -1.49
SCN8A-210ENST00000627665 SSUH2Q9Y2M2 353 aa5.73□□□□□ -1.49
SCN8A-210ENST00000627665 ABCC9O60706 1549 aa5.73□□□□□ -1.49
SCN8A-210ENST00000627665 RGL2O15211 777 aa5.72□□□□□ -1.49
SCN8A-210ENST00000627665 NPM1P06748 294 aaKnown RBP eCLIP5.72□□□□□ -1.49
SCN8A-210ENST00000627665 KDM2AQ9Y2K7 1162 aa5.72□□□□□ -1.49
SCN8A-210ENST00000627665 GSE1Q14687 1217 aa5.7□□□□□ -1.5
SCN8A-210ENST00000627665 OSCARQ8IYS5 282 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms