RNA–Protein interactions for RNA: ENST00000441841.1

LINC02243-201, Transcript of long intergenic non-protein coding RNA 2243, humanhuman

TSL 1 (best) BASIC

Gene LINC02243, Length 961 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02243-201ENST00000441841 SEMA3FQ13275 785 aa12.97□□□□□ -0.33
LINC02243-201ENST00000441841 DESI1Q6ICB0 168 aa12.97□□□□□ -0.33
LINC02243-201ENST00000441841 EIF4G3O43432 1585 aaKnown RBP12.97□□□□□ -0.33
LINC02243-201ENST00000441841 CUX1P39880 1505 aa12.97□□□□□ -0.33
LINC02243-201ENST00000441841 ZNF608Q9ULD9 1512 aaPredicted RBP12.97□□□□□ -0.33
LINC02243-201ENST00000441841 KCNA1Q09470 495 aa12.96□□□□□ -0.33
LINC02243-201ENST00000441841 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
LINC02243-201ENST00000441841 RGS22Q8NE09 1264 aa12.96□□□□□ -0.33
LINC02243-201ENST00000441841 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
LINC02243-201ENST00000441841 SOGA1O94964 1423 aa12.96□□□□□ -0.34
LINC02243-201ENST00000441841 SLC27A5Q9Y2P5 690 aa12.95□□□□□ -0.34
LINC02243-201ENST00000441841 FGD5Q6ZNL6 1462 aa12.94□□□□□ -0.34
LINC02243-201ENST00000441841 BHMG1C9JSJ3 638 aaPredicted RBP12.94□□□□□ -0.34
LINC02243-201ENST00000441841 ACTN4O43707 911 aaKnown RBP12.94□□□□□ -0.34
LINC02243-201ENST00000441841 MFAP1P55081 439 aaKnown RBP12.94□□□□□ -0.34
LINC02243-201ENST00000441841 Q3C1V9 767 aa12.94□□□□□ -0.34
LINC02243-201ENST00000441841 ZFRQ96KR1 1074 aaKnown RBP12.94□□□□□ -0.34
LINC02243-201ENST00000441841 MAFBQ9Y5Q3 323 aaPredicted RBP12.94□□□□□ -0.34
LINC02243-201ENST00000441841 ATG7O95352 703 aa12.93□□□□□ -0.34
LINC02243-201ENST00000441841 EIF4G2P78344 907 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC02243-201ENST00000441841 PUS10Q3MIT2 529 aaKnown RBP12.93□□□□□ -0.34
LINC02243-201ENST00000441841 LYPD8Q6UX82 237 aa12.93□□□□□ -0.34
LINC02243-201ENST00000441841 CARNS1A5YM72 827 aa12.92□□□□□ -0.34
LINC02243-201ENST00000441841 TBC1D9Q6ZT07 1266 aa12.91□□□□□ -0.34
LINC02243-201ENST00000441841 NR1H3Q13133 447 aa12.9□□□□□ -0.34
LINC02243-201ENST00000441841 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
LINC02243-201ENST00000441841 MTMR7Q9Y216 660 aa12.9□□□□□ -0.34
LINC02243-201ENST00000441841 BIVM-ERCC5R4GMW8 1640 aa12.9□□□□□ -0.34
LINC02243-201ENST00000441841 AQRO60306 1485 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC02243-201ENST00000441841 RAD54L2Q9Y4B4 1467 aa12.9□□□□□ -0.34
LINC02243-201ENST00000441841 TOP2BQ02880 1626 aa12.89□□□□□ -0.35
LINC02243-201ENST00000441841 ATP9BO43861 1147 aa12.88□□□□□ -0.35
LINC02243-201ENST00000441841 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
LINC02243-201ENST00000441841 TMEM88BA6NKF7 163 aa12.87□□□□□ -0.35
LINC02243-201ENST00000441841 RNF19BQ6ZMZ0 732 aa12.87□□□□□ -0.35
LINC02243-201ENST00000441841 OTUD5Q96G74 571 aa12.87□□□□□ -0.35
LINC02243-201ENST00000441841 LRCH3Q96II8 777 aa12.87□□□□□ -0.35
LINC02243-201ENST00000441841 ABCA10Q8WWZ4 1543 aa12.87□□□□□ -0.35
LINC02243-201ENST00000441841 FBXO45P0C2W1 286 aa12.86□□□□□ -0.35
LINC02243-201ENST00000441841 BLOC1S3Q6QNY0 202 aa12.86□□□□□ -0.35
LINC02243-201ENST00000441841 PRR14Q9BWN1 585 aa12.86□□□□□ -0.35
LINC02243-201ENST00000441841 VRTNQ9H8Y1 702 aa12.86□□□□□ -0.35
LINC02243-201ENST00000441841 WRNQ14191 1432 aaPredicted RBP eCLIP12.86□□□□□ -0.35
LINC02243-201ENST00000441841 TK2O00142 265 aa12.85□□□□□ -0.35
LINC02243-201ENST00000441841 MRPL50Q8N5N7 158 aaKnown RBP12.85□□□□□ -0.35
LINC02243-201ENST00000441841 USB1Q9BQ65 265 aaKnown RBP12.85□□□□□ -0.35
LINC02243-201ENST00000441841 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
LINC02243-201ENST00000441841 MAGI1Q96QZ7 1491 aaPredicted RBP12.85□□□□□ -0.35
LINC02243-201ENST00000441841 TDRD9Q8NDG6 1382 aaKnown RBP12.84□□□□□ -0.35
LINC02243-201ENST00000441841 ZBBXA8MT70 800 aa12.84□□□□□ -0.35
LINC02243-201ENST00000441841 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
LINC02243-201ENST00000441841 FKBPLQ9UIM3 349 aa12.84□□□□□ -0.35
LINC02243-201ENST00000441841 SALL2Q9Y467 1007 aaPredicted RBP12.84□□□□□ -0.35
LINC02243-201ENST00000441841 CHD1O14646 1710 aa12.84□□□□□ -0.35
LINC02243-201ENST00000441841 BRICD5Q6PL45 260 aa12.83□□□□□ -0.36
LINC02243-201ENST00000441841 ABCA5Q8WWZ7 1642 aa12.82□□□□□ -0.36
LINC02243-201ENST00000441841 F12P00748 615 aaPredicted RBP12.82□□□□□ -0.36
LINC02243-201ENST00000441841 KANK4Q5T7N3 995 aaPredicted RBP12.82□□□□□ -0.36
LINC02243-201ENST00000441841 PBRM1Q86U86 1689 aa12.82□□□□□ -0.36
LINC02243-201ENST00000441841 GAPVD1Q14C86 1478 aa12.81□□□□□ -0.36
LINC02243-201ENST00000441841 EMP3P54852 163 aa12.81□□□□□ -0.36
LINC02243-201ENST00000441841 IVNS1ABPQ9Y6Y0 642 aa12.81□□□□□ -0.36
LINC02243-201ENST00000441841 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
LINC02243-201ENST00000441841 PIK3CDO00329 1044 aa12.8□□□□□ -0.36
LINC02243-201ENST00000441841 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
LINC02243-201ENST00000441841 ZC3H4Q9UPT8 1303 aaKnown RBP12.8□□□□□ -0.36
LINC02243-201ENST00000441841 ELOAQ14241 798 aaKnown RBP12.79□□□□□ -0.36
LINC02243-201ENST00000441841 THAP11Q96EK4 314 aa12.79□□□□□ -0.36
LINC02243-201ENST00000441841 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
LINC02243-201ENST00000441841 ST18O60284 1047 aa12.78□□□□□ -0.36
LINC02243-201ENST00000441841 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
LINC02243-201ENST00000441841 SCUBE3Q8IX30 993 aa12.78□□□□□ -0.36
LINC02243-201ENST00000441841 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
LINC02243-201ENST00000441841 MAP10Q9P2G4 905 aa12.78□□□□□ -0.36
LINC02243-201ENST00000441841 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
LINC02243-201ENST00000441841 FMNL1O95466 1100 aaPredicted RBP12.77□□□□□ -0.37
LINC02243-201ENST00000441841 JUNDP17535 347 aa12.77□□□□□ -0.37
LINC02243-201ENST00000441841 PTPRNQ16849 979 aa12.77□□□□□ -0.37
LINC02243-201ENST00000441841 FAM205CA6NFA0 338 aa12.76□□□□□ -0.37
LINC02243-201ENST00000441841 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
LINC02243-201ENST00000441841 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
LINC02243-201ENST00000441841 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
LINC02243-201ENST00000441841 APLP1P51693 650 aa12.75□□□□□ -0.37
LINC02243-201ENST00000441841 PPP4CP60510 307 aa12.75□□□□□ -0.37
LINC02243-201ENST00000441841 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
LINC02243-201ENST00000441841 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
LINC02243-201ENST00000441841 USP17L1Q7RTZ2 530 aa12.75□□□□□ -0.37
LINC02243-201ENST00000441841 CHMP7Q8WUX9 453 aaPredicted RBP12.75□□□□□ -0.37
LINC02243-201ENST00000441841 ZMIZ1Q9ULJ6 1067 aa12.75□□□□□ -0.37
LINC02243-201ENST00000441841 SKIP12755 728 aa12.74□□□□□ -0.37
LINC02243-201ENST00000441841 PLEKHM2Q8IWE5 1019 aa12.74□□□□□ -0.37
LINC02243-201ENST00000441841 RIMBP3CA6NJZ7 1639 aa12.73□□□□□ -0.37
LINC02243-201ENST00000441841 RIMBP3BA6NNM3 1639 aa12.73□□□□□ -0.37
LINC02243-201ENST00000441841 RIMBP3Q9UFD9 1639 aa12.73□□□□□ -0.37
LINC02243-201ENST00000441841 ERICH3Q5RHP9 1530 aa12.73□□□□□ -0.37
LINC02243-201ENST00000441841 USP17L5A8MUK1 530 aa12.73□□□□□ -0.37
LINC02243-201ENST00000441841 HRO43593 1189 aa12.73□□□□□ -0.37
LINC02243-201ENST00000441841 NR1I2O75469 434 aa12.73□□□□□ -0.37
LINC02243-201ENST00000441841 ANKK1Q8NFD2 765 aa12.73□□□□□ -0.37
LINC02243-201ENST00000441841 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms