RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
ARHGEF39-201ENST00000378387 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
ARHGEF39-201ENST00000378387 FIBPO43427 364 aa12.78□□□□□ -0.36
ARHGEF39-201ENST00000378387 BMP2KLQ5H9B9 411 aa12.78□□□□□ -0.36
ARHGEF39-201ENST00000378387 CC2D2AQ9P2K1 1620 aa12.78□□□□□ -0.36
ARHGEF39-201ENST00000378387 UGGT2Q9NYU1 1516 aa12.77□□□□□ -0.36
ARHGEF39-201ENST00000378387 CWC22Q9HCG8 908 aaKnown RBP12.77□□□□□ -0.36
ARHGEF39-201ENST00000378387 PZPP20742 1482 aa12.77□□□□□ -0.37
ARHGEF39-201ENST00000378387 ERCC6Q03468 1493 aa12.77□□□□□ -0.37
ARHGEF39-201ENST00000378387 NUCB1Q02818 461 aa12.77□□□□□ -0.37
ARHGEF39-201ENST00000378387 INTS3Q68E01 1043 aaKnown RBP12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 CAMSAP2Q08AD1 1489 aa12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 GOLGA6L4A6NEF3 574 aa12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 HDAC1Q13547 482 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 WDR63Q8IWG1 891 aa12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 ZNF710Q8N1W2 664 aa12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 PIBF1Q8WXW3 757 aa12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 PDLIM2Q96JY6 352 aa12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 ABCA5Q8WWZ7 1642 aa12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 KDM5CP41229 1560 aa12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 TPD52L1Q16890 204 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 IPO4Q8TEX9 1081 aaKnown RBP12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 ZFP91Q96JP5 570 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 TRIM34Q9BYJ4 488 aa12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 GAPVD1Q14C86 1478 aa12.76□□□□□ -0.37
ARHGEF39-201ENST00000378387 CCDC112Q8NEF3 446 aa12.75□□□□□ -0.37
ARHGEF39-201ENST00000378387 RTF1Q92541 710 aaKnown RBP12.75□□□□□ -0.37
ARHGEF39-201ENST00000378387 DNMBPQ6XZF7 1577 aa12.75□□□□□ -0.37
ARHGEF39-201ENST00000378387 ZBTB9Q96C00 473 aa12.75□□□□□ -0.37
ARHGEF39-201ENST00000378387 TMEM51Q9NW97 253 aa12.75□□□□□ -0.37
ARHGEF39-201ENST00000378387 DTNBO60941 627 aa12.75□□□□□ -0.37
ARHGEF39-201ENST00000378387 RILPL2Q969X0 211 aa12.75□□□□□ -0.37
ARHGEF39-201ENST00000378387 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
ARHGEF39-201ENST00000378387 SLC12A5Q9H2X9 1139 aa12.75□□□□□ -0.37
ARHGEF39-201ENST00000378387 ANO2Q9NQ90 1003 aa12.75□□□□□ -0.37
ARHGEF39-201ENST00000378387 TRAK1Q9UPV9 953 aa12.75□□□□□ -0.37
ARHGEF39-201ENST00000378387 NLRP1Q9C000 1473 aa12.74□□□□□ -0.37
ARHGEF39-201ENST00000378387 MCCP23508 829 aa12.74□□□□□ -0.37
ARHGEF39-201ENST00000378387 UPF3BQ9BZI7 483 aaKnown RBP12.74□□□□□ -0.37
ARHGEF39-201ENST00000378387 EPRSP07814 1512 aaKnown RBP12.74□□□□□ -0.37
ARHGEF39-201ENST00000378387 REC8O95072 547 aa12.74□□□□□ -0.37
ARHGEF39-201ENST00000378387 C16orf71Q8IYS4 520 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF39-201ENST00000378387 LARP6Q9BRS8 491 aaKnown RBP12.74□□□□□ -0.37
ARHGEF39-201ENST00000378387 TAF7LQ5H9L4 462 aa12.73□□□□□ -0.37
ARHGEF39-201ENST00000378387 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
ARHGEF39-201ENST00000378387 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
ARHGEF39-201ENST00000378387 TRIM5Q9C035 493 aa12.72□□□□□ -0.37
ARHGEF39-201ENST00000378387 PRG4Q92954 1404 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF39-201ENST00000378387 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
ARHGEF39-201ENST00000378387 SMARCA5O60264 1052 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF39-201ENST00000378387 GADD45BO75293 160 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF39-201ENST00000378387 TNNT1P13805 278 aa12.72□□□□□ -0.37
ARHGEF39-201ENST00000378387 GTF2F1P35269 517 aaKnown RBP eCLIP12.72□□□□□ -0.37
ARHGEF39-201ENST00000378387 OGFRQ9NZT2 677 aa12.72□□□□□ -0.37
ARHGEF39-201ENST00000378387 NAA30Q147X3 362 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF39-201ENST00000378387 GCC1Q96CN9 775 aa12.71□□□□□ -0.37
ARHGEF39-201ENST00000378387 MAGI3Q5TCQ9 1506 aa12.71□□□□□ -0.37
ARHGEF39-201ENST00000378387 DDIT3P35638 169 aa12.71□□□□□ -0.37
ARHGEF39-201ENST00000378387 KIF2CQ99661 725 aa12.71□□□□□ -0.37
ARHGEF39-201ENST00000378387 SRPK2P78362 688 aaKnown RBP12.71□□□□□ -0.38
ARHGEF39-201ENST00000378387 CFAP70Q5T0N1 1121 aa12.71□□□□□ -0.38
ARHGEF39-201ENST00000378387 PDS5BQ9NTI5 1447 aa12.7□□□□□ -0.38
ARHGEF39-201ENST00000378387 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
ARHGEF39-201ENST00000378387 ZBTB40Q9NUA8 1239 aa12.7□□□□□ -0.38
ARHGEF39-201ENST00000378387 USP48Q86UV5 1035 aa12.7□□□□□ -0.38
ARHGEF39-201ENST00000378387 FAM184AQ8NB25 1140 aa12.7□□□□□ -0.38
ARHGEF39-201ENST00000378387 TMX1Q9H3N1 280 aa12.7□□□□□ -0.38
ARHGEF39-201ENST00000378387 CAMK4Q16566 473 aa12.7□□□□□ -0.38
ARHGEF39-201ENST00000378387 KIAA0586Q9BVV6 1533 aa12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 VPS37CA5D8V6 355 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 POLR3GO15318 223 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 GORABQ5T7V8 394 aa12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 UHRF1BP1Q6BDS2 1440 aa12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 FBXW7Q969H0 707 aa12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 TMX3Q96JJ7 454 aa12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 IRX3P78415 501 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 SLC4A10Q6U841 1118 aa12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 DNAJC2Q99543 621 aaKnown RBP12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 PYCARDQ9ULZ3 195 aa12.69□□□□□ -0.38
ARHGEF39-201ENST00000378387 PTGS1P23219 599 aa12.68□□□□□ -0.38
ARHGEF39-201ENST00000378387 FEZ1Q99689 392 aa12.68□□□□□ -0.38
ARHGEF39-201ENST00000378387 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
ARHGEF39-201ENST00000378387 GPRASP1Q5JY77 1395 aa12.68□□□□□ -0.38
ARHGEF39-201ENST00000378387 KIF14Q15058 1648 aa12.68□□□□□ -0.38
ARHGEF39-201ENST00000378387 CARD14Q9BXL6 1004 aa12.68□□□□□ -0.38
ARHGEF39-201ENST00000378387 CALCOCO1Q9P1Z2 691 aa12.68□□□□□ -0.38
ARHGEF39-201ENST00000378387 IBTKQ9P2D0 1353 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF39-201ENST00000378387 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF39-201ENST00000378387 TRMT1Q9NXH9 659 aaKnown RBP12.68□□□□□ -0.38
ARHGEF39-201ENST00000378387 KIF21AQ7Z4S6 1674 aa12.67□□□□□ -0.38
ARHGEF39-201ENST00000378387 KRT222Q8N1A0 295 aa12.67□□□□□ -0.38
ARHGEF39-201ENST00000378387 PRAG1Q86YV5 1406 aa12.67□□□□□ -0.38
ARHGEF39-201ENST00000378387 CCDC186Q7Z3E2 898 aa12.67□□□□□ -0.38
ARHGEF39-201ENST00000378387 TSHZ3Q63HK5 1081 aa12.67□□□□□ -0.38
ARHGEF39-201ENST00000378387 PRDM2Q13029 1718 aa12.66□□□□□ -0.38
ARHGEF39-201ENST00000378387 CUL7Q14999 1698 aa12.66□□□□□ -0.38
ARHGEF39-201ENST00000378387 NUTM2DQ5VT03 806 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF39-201ENST00000378387 OTUD7AQ8TE49 926 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms