RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Dip2bQ3UH60 1574 aa17.3■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Safb2Q80YR5 991 aaKnown RBP17.3■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Asxl2Q8BZ32 1370 aa17.29■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Znf335A2A5K6 1337 aa17.29■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Cavin4A2AMM0 362 aa17.29■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 CatipB9EKE5 520 aa17.29■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Mapk8ip3Q9ESN9 1337 aa17.28■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Ppp1r15aP17564 657 aa17.28■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Trim58Q5NCC9 485 aa17.28■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Pik3c2bE9QAN8 1632 aa17.27■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Ccar1Q8CH18 1146 aaKnown RBP17.27■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Tnrc6bQ8BKI2 1810 aaKnown RBP17.26■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Znf521Q6KAS7 1311 aa17.26■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Slc4a3P16283 1227 aa17.26■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Mdc1Q5PSV9 1707 aa17.25■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 IghaA0A0A6YXW6 389 aa17.25■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Apaf1O88879 1249 aa17.25■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Dnajc5gQ8C632 165 aa17.25■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Dusp27Q148W8 1138 aa17.24■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Astn2Q80Z10 1352 aa17.23■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Atp7bQ64446 1462 aa17.23■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Slc12a5Q91V14 1138 aa17.21■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Atxn3Q9CVD2 355 aa17.21■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Ttc21aQ8C0S4 1314 aa17.21■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Rreb1Q3UH06 1700 aaKnown RBP17.21■□□□□ 0.35
Pdlim5-208ENSMUST00000196220 Ksr2Q3UVC0 959 aa17.2■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Gas2l2Q5SSG4 860 aa17.2■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Smc5Q8CG46 1101 aaKnown RBP17.2■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 HnrnpmQ9D0E1 729 aaKnown RBP17.2■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 N4bp2F8VQG7 1678 aaKnown RBP17.19■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 NudcO35685 332 aaKnown RBP17.19■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Scaf1Q5U4C3 1256 aaKnown RBP17.19■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Swt1Q9DBQ9 907 aa17.19■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 EspnQ9ET47 871 aa17.19■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Ttll13A4Q9F6 804 aa17.18■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Zfp777B9EKF4 885 aa17.18■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Q3UJC8 639 aa17.18■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Q4VA45 678 aa17.18■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Egfem1Q8C088 590 aa17.18■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 CemipQ8BI06 1361 aa17.18■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Ccdc171E9Q1U1 1324 aa17.18■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Ankrd50F7BE84 1390 aa17.18■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Spef2Q8C9J3 1734 aa17.17■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Pak3Q61036 559 aa17.17■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Apbb1Q9QXJ1 710 aa17.16■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 PalmQ9Z0P4 383 aa17.16■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 D430041D05RikF6ZGR6 1678 aa17.15■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 CastP51125 788 aa17.15■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 GphnQ8BUV3 769 aaKnown RBP17.15■□□□□ 0.34
Pdlim5-208ENSMUST00000196220 Mon2Q80TL7 1715 aa17.14■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Med1Q925J9 1575 aa17.14■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Rsph6aQ8CDR2 708 aa17.14■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Birc3O08863 600 aa17.13■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Ipo9Q91YE6 1041 aa17.13■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Chmp5Q9D7S9 219 aa17.13■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 4930407I10RikD3Z5T8 1512 aa17.13■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Pank1Q8K4K6 548 aa17.13■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 NalcnQ8BXR5 1738 aa17.12■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Rad17Q6NXW6 688 aa17.12■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Uhrf1bp1lA2RSJ4 1457 aa17.12■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Cdk12Q14AX6 1484 aaKnown RBP17.12■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Abcc10Q8R4P9 1501 aa17.11■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 C5P06684 1680 aa17.11■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Als2Q920R0 1651 aa17.11■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Kif20bQ80WE4 1774 aaKnown RBP17.11■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Chd4Q6PDQ2 1915 aaKnown RBP17.11■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Znf316Q6PGE4 1016 aa17.1■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Tspyl2Q7TQI8 677 aa17.1■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Iqcf3Q9D498 203 aa17.1■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Rbm25B2RY56 838 aaKnown RBP17.1■□□□□ 0.33
Pdlim5-208ENSMUST00000196220 Gnai1B2RSH2 354 aa17.08■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Hs1bp3Q3TC93 395 aa17.08■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Gnai3Q9DC51 354 aa17.08■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Sos1Q62245 1319 aa17.08■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Col16a1Q8BLX7 1580 aa17.07■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Duxf3A0A0N4SV92 674 aa17.06■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Polr3glQ8R0C0 218 aa17.05■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Atl3Q91YH5 541 aa17.05■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 G3bp1P97855 465 aaKnown RBP17.04■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Cavin2Q63918 418 aaKnown RBP17.04■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Tmc1Q8R4P5 757 aa17.04■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Pik3c2aQ61194 1686 aa17.04■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Slit2Q9R1B9 1521 aa17.03■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Cdc37l1Q9CZP7 335 aa17.03■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Eif4a2P10630 407 aa17.02■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Plppr3Q7TPB0 716 aa17.02■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Ccdc60Q8C4J0 545 aa17.02■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Chmp4bQ9D8B3 224 aaKnown RBP17.02■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Ubr1O70481 1757 aa17.02■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Scn7aB1AYL1 1681 aa17.02■□□□□ 0.32
Pdlim5-208ENSMUST00000196220 Stk31Q99MW1 1018 aa17.01■□□□□ 0.31
Pdlim5-208ENSMUST00000196220 B4galnt3Q6L8S8 986 aa17.01■□□□□ 0.31
Pdlim5-208ENSMUST00000196220 Rimbp3Q3V0F0 1606 aa17■□□□□ 0.31
Pdlim5-208ENSMUST00000196220 Ap3b2Q9JME5 1082 aa17■□□□□ 0.31
Pdlim5-208ENSMUST00000196220 Trim26Q99PN3 545 aa16.99■□□□□ 0.31
Pdlim5-208ENSMUST00000196220 Gm10563F6WIE4 79 aa16.99■□□□□ 0.31
Pdlim5-208ENSMUST00000196220 Vamp4O70480 141 aa16.99■□□□□ 0.31
Pdlim5-208ENSMUST00000196220 Idi1P58044 227 aa16.99■□□□□ 0.31
Pdlim5-208ENSMUST00000196220 Rab11fip3Q8CHD8 1047 aa16.99■□□□□ 0.31
Pdlim5-208ENSMUST00000196220 Rlbp1Q9Z275 317 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms