RNA–Protein interactions for RNA: ENSMUST00000149179.8

Col20a1-202, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 3,867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-202ENSMUST00000149179 Nphp4P59240 1425 aa13.37□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Iqsec2Q5DU25 1478 aa13.37□□□□□ -0.27
Col20a1-202ENSMUST00000149179 ShprhQ7TPQ3 1674 aa13.37□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Cfap65Q3V0B4 1847 aa13.37□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Wdr63B2RY71 923 aa13.37□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Q3UPC7 1272 aa13.37□□□□□ -0.27
Col20a1-202ENSMUST00000149179 1700019A02RikA0A087WPV9 146 aa13.36□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Ythdc1E9Q5K9 736 aaKnown RBP13.36□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Casq1O09165 405 aa13.36□□□□□ -0.27
Col20a1-202ENSMUST00000149179 AnkarA2RT91 1465 aa13.36□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Bag4Q8CI61 457 aa13.36□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Cavin4A2AMM0 362 aa13.36□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Abcc1O35379 1528 aa13.35□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Plekhm2Q80TQ5 1018 aa13.35□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Rasa1E9PYG6 1038 aa13.35□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Myom1Q62234 1667 aaKnown RBP13.35□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Cfap74Q3UY96 1578 aa13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Irf5P56477 497 aa13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Rnf214Q8BFU3 668 aaKnown RBP13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Erbb4Q61527 1308 aa13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Atp10dQ8K2X1 1416 aa13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Rnf17Q99MV7 1640 aa13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Birc3O08863 600 aa13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Tmx3Q8BXZ1 456 aa13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 CarsQ9ER72 831 aaKnown RBP13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 CenpjQ569L8 1344 aa13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Lemd3Q9WU40 921 aa13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 PalmQ9Z0P4 383 aa13.34□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Ankrd50F7BE84 1390 aa13.33□□□□□ -0.28
Col20a1-202ENSMUST00000149179 VgfQ0VGU4 617 aa13.33□□□□□ -0.28
Col20a1-202ENSMUST00000149179 KdrP35918 1367 aa13.33□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Chrna2Q91X60 512 aa13.33□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Hs1bp3Q3TC93 395 aa13.33□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Slc12a5Q91V14 1138 aa13.33□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Fgd6Q69ZL1 1399 aa13.32□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Triml2E9PW10 424 aa13.32□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Uggt2E9Q4X2 1504 aa13.32□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Znf608Q56A10 1511 aa13.32□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Rbm27Q5SFM8 1060 aaKnown RBP13.32□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Pank2Q3U4S0 443 aa13.32□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Smarca5Q91ZW3 1051 aaKnown RBP13.32□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Cep152A2AUM9 1736 aaKnown RBP13.31□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Swt1Q9DBQ9 907 aa13.31□□□□□ -0.28
Col20a1-202ENSMUST00000149179 MvpQ9EQK5 861 aa13.31□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Lrriq1Q0P5X1 1673 aa13.31□□□□□ -0.28
Col20a1-202ENSMUST00000149179 AU022751B1B0V2 589 aa13.31□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Pibf1E9Q6K3 756 aa13.31□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Isy1Q69ZQ2 285 aaKnown RBP13.31□□□□□ -0.28
Col20a1-202ENSMUST00000149179 CalcaP70160 136 aa13.3□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Cdc37l1Q9CZP7 335 aa13.3□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Ripk4Q9ERK0 786 aa13.3□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Ttc21aQ8C0S4 1314 aa13.3□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Clcn1Q64347 994 aa13.3□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Znf316Q6PGE4 1016 aa13.3□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Aldh1l1Q8R0Y6 902 aa13.3□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Tpm2P58774 284 aa13.3□□□□□ -0.28
Col20a1-202ENSMUST00000149179 FanclQ9CR14 375 aa13.29□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Abcc3B2RX12 1523 aa13.29□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Ccdc171E9Q1U1 1324 aa13.29□□□□□ -0.28
Col20a1-202ENSMUST00000149179 FanciQ8K368 1330 aa13.29□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Talpid3E9PV87 1520 aa13.29□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Mcm10Q0VBD2 885 aa13.29□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Klhdc4Q921I2 584 aa13.29□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Nsd3Q6P2L6 1439 aa13.29□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Trim27Q62158 513 aa13.29□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Cetn4Q8K4K1 168 aa13.29□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Syce3B5KM66 88 aa13.28□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Cc2d1aQ8K1A6 943 aa13.28□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Usp16Q99LG0 825 aa13.28□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Hecw1Q8K4P8 1604 aa13.28□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Ppip5k2Q6ZQB6 1129 aa13.28□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Ush1cQ9ES64 910 aa13.28□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Gdpd2Q9ESM6 539 aa13.28□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Eif4g2Q62448 906 aaKnown RBP13.27□□□□□ -0.28
Col20a1-202ENSMUST00000149179 InsrP15208 1372 aa13.27□□□□□ -0.28
Col20a1-202ENSMUST00000149179 Lmod3E9QA62 571 aa13.27□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Vamp4O70480 141 aa13.27□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Ankrd44B2RXR6 993 aa13.27□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Shq1Q7TMX5 569 aa13.27□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Ric3Q8BPM6 367 aa13.27□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Kdm4cQ8VCD7 1054 aa13.27□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Gm9992B2RWK3 458 aa13.26□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Unc93aQ710D3 458 aa13.26□□□□□ -0.29
Col20a1-202ENSMUST00000149179 1700010I14RikQ7TPG0 532 aa13.26□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Gadd45bP22339 160 aa13.26□□□□□ -0.29
Col20a1-202ENSMUST00000149179 LifrP42703 1092 aa13.26□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Zkscan1Q8BGS3 561 aaKnown RBP13.26□□□□□ -0.29
Col20a1-202ENSMUST00000149179 4931400O07RikQ9D4M5 137 aa13.26□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Pdcd11Q6NS46 1862 aaKnown RBP13.25□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Tex2Q6ZPJ0 1128 aaKnown RBP13.25□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Nol12Q8BG17 217 aa13.25□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Cabp2Q9JLK4 216 aa13.25□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Wwc1Q5SXA9 1104 aa13.25□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Q9D2X8 372 aa13.25□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Neurl4Q5NCX5 1563 aa13.25□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Cdk5rap2Q8K389 1822 aa13.24□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Abca6Q8K441 1624 aa13.24□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Becn1O88597 448 aa13.24□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Aifm3Q3TY86 605 aa13.24□□□□□ -0.29
Col20a1-202ENSMUST00000149179 Cpa2Q504N0 417 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms