RNA–Protein interactions for RNA: ENSMUST00000149179.8

Col20a1-202, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 3,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-202ENSMUST00000149179 NischQ80TM9 1593 aa19.15■□□□□ 0.66
Col20a1-202ENSMUST00000149179 Rhox8Q6VSS7 320 aa18.87■□□□□ 0.61
Col20a1-202ENSMUST00000149179 Abcc9P70170 1546 aa18.47■□□□□ 0.55
Col20a1-202ENSMUST00000149179 Gm35339A0A140LHH9 1649 aa18.17■□□□□ 0.5
Col20a1-202ENSMUST00000149179 Rpgrip1Q9EPQ2 1331 aa18.11■□□□□ 0.49
Col20a1-202ENSMUST00000149179 Rtl1Q7M732 1744 aa18.08■□□□□ 0.48
Col20a1-202ENSMUST00000149179 Ehmt2Q9Z148 1263 aaKnown RBP18.06■□□□□ 0.48
Col20a1-202ENSMUST00000149179 Ccdc180J3QNE4 1664 aa18.03■□□□□ 0.48
Col20a1-202ENSMUST00000149179 Abcc8B2RUS7 1588 aa17.96■□□□□ 0.47
Col20a1-202ENSMUST00000149179 Acin1Q9JIX8 1338 aaKnown RBP17.81■□□□□ 0.44
Col20a1-202ENSMUST00000149179 Zcchc6Q5BLK4 1491 aaKnown RBP17.51■□□□□ 0.39
Col20a1-202ENSMUST00000149179 Pcgf6Q99NA9 353 aa17.5■□□□□ 0.39
Col20a1-202ENSMUST00000149179 Ccdc136Q3TVA9 1136 aa17.46■□□□□ 0.39
Col20a1-202ENSMUST00000149179 HrcG5E8J6 738 aa17.28■□□□□ 0.36
Col20a1-202ENSMUST00000149179 Dcaf1Q80TR8 1506 aa17.19■□□□□ 0.34
Col20a1-202ENSMUST00000149179 Supt5hO55201 1082 aaKnown RBP17.16■□□□□ 0.34
Col20a1-202ENSMUST00000149179 Trim41Q5NCC3 630 aa17.13■□□□□ 0.33
Col20a1-202ENSMUST00000149179 Zeb1Q64318 1117 aa16.93■□□□□ 0.3
Col20a1-202ENSMUST00000149179 Neurod1Q60867 357 aa16.89■□□□□ 0.29
Col20a1-202ENSMUST00000149179 Rb1cc1Q9ESK9 1588 aa16.82■□□□□ 0.28
Col20a1-202ENSMUST00000149179 Gab3Q8BSM5 595 aa16.78■□□□□ 0.28
Col20a1-202ENSMUST00000149179 Cngb1E1AZ71 1325 aa16.67■□□□□ 0.26
Col20a1-202ENSMUST00000149179 Cep164Q5DU05 1446 aa16.61■□□□□ 0.25
Col20a1-202ENSMUST00000149179 Sall2Q9QX96 1004 aa16.55■□□□□ 0.24
Col20a1-202ENSMUST00000149179 Mier1Q5UAK0 511 aa16.55■□□□□ 0.24
Col20a1-202ENSMUST00000149179 Baz1aO88379 1555 aa16.54■□□□□ 0.24
Col20a1-202ENSMUST00000149179 Chic1Q8CBW7 227 aa16.54■□□□□ 0.24
Col20a1-202ENSMUST00000149179 ScribQ80U72 1612 aa16.53■□□□□ 0.24
Col20a1-202ENSMUST00000149179 Las1lA2BE28 776 aaKnown RBP16.48■□□□□ 0.23
Col20a1-202ENSMUST00000149179 NefmP08553 848 aa16.47■□□□□ 0.23
Col20a1-202ENSMUST00000149179 Wdr66E9Q743 1299 aa16.42■□□□□ 0.22
Col20a1-202ENSMUST00000149179 Ppargc1bQ8VHJ7 1014 aa16.4■□□□□ 0.22
Col20a1-202ENSMUST00000149179 Kdm5dQ62240 1548 aa16.4■□□□□ 0.22
Col20a1-202ENSMUST00000149179 Csrnp3P59055 597 aa16.39■□□□□ 0.21
Col20a1-202ENSMUST00000149179 Rsf1E9PWW9 1441 aaKnown RBP16.36■□□□□ 0.21
Col20a1-202ENSMUST00000149179 1700123L14RikQ3V2K7 440 aa16.36■□□□□ 0.21
Col20a1-202ENSMUST00000149179 UbtfP25976 765 aaKnown RBP16.3■□□□□ 0.2
Col20a1-202ENSMUST00000149179 Anks4bQ8K3X6 423 aa16.25■□□□□ 0.19
Col20a1-202ENSMUST00000149179 Aebp2Q9Z248 504 aaKnown RBP16.24■□□□□ 0.19
Col20a1-202ENSMUST00000149179 Ccdc88bQ4QRL3 1481 aa16.2■□□□□ 0.18
Col20a1-202ENSMUST00000149179 Gm38655A0A286YDK6 273 aa16.18■□□□□ 0.18
Col20a1-202ENSMUST00000149179 Smarca2Q6DIC0 1577 aa16.18■□□□□ 0.18
Col20a1-202ENSMUST00000149179 Esf1Q3V1V3 845 aaKnown RBP16.14■□□□□ 0.17
Col20a1-202ENSMUST00000149179 Cdk11bP24788 784 aaKnown RBP16.14■□□□□ 0.17
Col20a1-202ENSMUST00000149179 Nop58Q6DFW4 536 aaKnown RBP16.13■□□□□ 0.17
Col20a1-202ENSMUST00000149179 NacadQ5SWP3 1504 aa16.12■□□□□ 0.17
Col20a1-202ENSMUST00000149179 Myt1lP97500 1187 aa16.05■□□□□ 0.16
Col20a1-202ENSMUST00000149179 ClspnQ80YR7 1315 aa16■□□□□ 0.15
Col20a1-202ENSMUST00000149179 Golga3P55937 1487 aa15.97■□□□□ 0.15
Col20a1-202ENSMUST00000149179 Brd4Q9ESU6 1400 aaKnown RBP15.97■□□□□ 0.15
Col20a1-202ENSMUST00000149179 CenpbP27790 599 aa15.94■□□□□ 0.14
Col20a1-202ENSMUST00000149179 Cecr2E9Q2Z1 1453 aa15.93■□□□□ 0.14
Col20a1-202ENSMUST00000149179 Aplp2Q06335 707 aa15.92■□□□□ 0.14
Col20a1-202ENSMUST00000149179 Crybg2B7ZCC2 1516 aa15.91■□□□□ 0.14
Col20a1-202ENSMUST00000149179 TonslQ6NZL6 1363 aa15.89■□□□□ 0.13
Col20a1-202ENSMUST00000149179 Plekhg3Q4VAC9 1341 aa15.82■□□□□ 0.12
Col20a1-202ENSMUST00000149179 Synj1Q8CHC4 1574 aa15.81■□□□□ 0.12
Col20a1-202ENSMUST00000149179 Npm2Q80W85 207 aa15.78■□□□□ 0.12
Col20a1-202ENSMUST00000149179 Sycp2Q9CUU3 1500 aa15.75■□□□□ 0.11
Col20a1-202ENSMUST00000149179 Mapk8ip2Q9ERE9 830 aa15.72■□□□□ 0.11
Col20a1-202ENSMUST00000149179 Eid3Q3V124 375 aa15.72■□□□□ 0.11
Col20a1-202ENSMUST00000149179 SafbD3YXK2 937 aaKnown RBP15.7■□□□□ 0.1
Col20a1-202ENSMUST00000149179 Ap3b1Q9Z1T1 1105 aa15.69■□□□□ 0.1
Col20a1-202ENSMUST00000149179 Myt1Q8CFC2 1127 aa15.67■□□□□ 0.1
Col20a1-202ENSMUST00000149179 Hnrnpul2Q00PI9 745 aaKnown RBP15.66■□□□□ 0.1
Col20a1-202ENSMUST00000149179 CftrP26361 1476 aa15.63■□□□□ 0.09
Col20a1-202ENSMUST00000149179 Fam71e1A1L3C1 212 aa15.61■□□□□ 0.09
Col20a1-202ENSMUST00000149179 Rapgef2Q8CHG7 1496 aa15.6■□□□□ 0.09
Col20a1-202ENSMUST00000149179 Clip1Q922J3 1391 aa15.6■□□□□ 0.09
Col20a1-202ENSMUST00000149179 Cc2d2aQ8CFW7 1633 aa15.59■□□□□ 0.09
Col20a1-202ENSMUST00000149179 Cep162Q6ZQ06 1403 aa15.58■□□□□ 0.09
Col20a1-202ENSMUST00000149179 Top2bQ64511 1612 aa15.54■□□□□ 0.08
Col20a1-202ENSMUST00000149179 Tnnt3Q9QZ47 272 aa15.44■□□□□ 0.06
Col20a1-202ENSMUST00000149179 DiexfQ8BTT6 772 aaKnown RBP15.42■□□□□ 0.06
Col20a1-202ENSMUST00000149179 Ncapd3Q6ZQK0 1506 aa15.41■□□□□ 0.06
Col20a1-202ENSMUST00000149179 Fmn1Q05860 1466 aa15.4■□□□□ 0.06
Col20a1-202ENSMUST00000149179 Cttnbp2B9EJA2 1648 aa15.39■□□□□ 0.05
Col20a1-202ENSMUST00000149179 Top2aQ01320 1528 aaKnown RBP15.38■□□□□ 0.05
Col20a1-202ENSMUST00000149179 BicraF8VPZ9 1578 aa15.38■□□□□ 0.05
Col20a1-202ENSMUST00000149179 NclP09405 707 aaKnown RBP15.37■□□□□ 0.05
Col20a1-202ENSMUST00000149179 Slc24a1Q91WD8 1130 aa15.37■□□□□ 0.05
Col20a1-202ENSMUST00000149179 Il27Q8K3I6 234 aa15.37■□□□□ 0.05
Col20a1-202ENSMUST00000149179 Fam50aQ9WV03 339 aaKnown RBP15.35■□□□□ 0.05
Col20a1-202ENSMUST00000149179 Bcl11aQ9QYE3 773 aa15.34■□□□□ 0.05
Col20a1-202ENSMUST00000149179 Anp32aO35381 247 aa15.26■□□□□ 0.03
Col20a1-202ENSMUST00000149179 Znf710Q3U288 666 aa15.24■□□□□ 0.03
Col20a1-202ENSMUST00000149179 Lmod2Q3UHZ5 550 aa15.23■□□□□ 0.03
Col20a1-202ENSMUST00000149179 Setd5Q5XJV7 1441 aa15.22■□□□□ 0.03
Col20a1-202ENSMUST00000149179 Ifnlr1Q8CGK5 535 aa15.21■□□□□ 0.03
Col20a1-202ENSMUST00000149179 Eea1Q8BL66 1411 aa15.21■□□□□ 0.02
Col20a1-202ENSMUST00000149179 Stra8P70278 393 aa15.2■□□□□ 0.02
Col20a1-202ENSMUST00000149179 Rpap1Q80TE0 1409 aa15.2■□□□□ 0.02
Col20a1-202ENSMUST00000149179 Nolc1E9Q5C9 702 aaKnown RBP15.2■□□□□ 0.02
Col20a1-202ENSMUST00000149179 Arap1Q4LDD4 1452 aa15.2■□□□□ 0.02
Col20a1-202ENSMUST00000149179 Smarca4Q3TKT4 1613 aaKnown RBP15.2■□□□□ 0.02
Col20a1-202ENSMUST00000149179 Calr4Q3TQS0 420 aa15.19■□□□□ 0.02
Col20a1-202ENSMUST00000149179 Eif5bQ05D44 1216 aaKnown RBP15.16■□□□□ 0.02
Col20a1-202ENSMUST00000149179 BlmO88700 1416 aa15.15■□□□□ 0.02
Col20a1-202ENSMUST00000149179 Ube2uB1AUC4 352 aa15.15■□□□□ 0.02
Col20a1-202ENSMUST00000149179 Hspa5P20029 655 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms