RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Safb2Q80YR5 991 aaKnown RBP14.11□□□□□ -0.15
Ift88-201ENSMUST00000122063 PalmQ9Z0P4 383 aa14.11□□□□□ -0.15
Ift88-201ENSMUST00000122063 Gm6268A2A3U9 297 aa14.11□□□□□ -0.15
Ift88-201ENSMUST00000122063 NgefQ8CHT1 710 aa14.11□□□□□ -0.15
Ift88-201ENSMUST00000122063 Cluap1Q8R3P7 413 aa14.11□□□□□ -0.15
Ift88-201ENSMUST00000122063 Slc12a5Q91V14 1138 aa14.11□□□□□ -0.15
Ift88-201ENSMUST00000122063 NudcO35685 332 aaKnown RBP14.1□□□□□ -0.15
Ift88-201ENSMUST00000122063 Duxf3A0A0N4SV92 674 aa14.09□□□□□ -0.15
Ift88-201ENSMUST00000122063 Ccdc60Q8C4J0 545 aa14.09□□□□□ -0.15
Ift88-201ENSMUST00000122063 Dnajc5gQ8C632 165 aa14.09□□□□□ -0.15
Ift88-201ENSMUST00000122063 Ppp1r3fQ9JIG4 799 aa14.09□□□□□ -0.15
Ift88-201ENSMUST00000122063 Ccdc27Q3V036 639 aa14.09□□□□□ -0.15
Ift88-201ENSMUST00000122063 Rlbp1Q9Z275 317 aa14.09□□□□□ -0.15
Ift88-201ENSMUST00000122063 Map3k19E9Q3S4 1311 aa14.08□□□□□ -0.15
Ift88-201ENSMUST00000122063 Itsn1Q9Z0R4 1714 aa14.08□□□□□ -0.16
Ift88-201ENSMUST00000122063 Cavin4A2AMM0 362 aa14.08□□□□□ -0.16
Ift88-201ENSMUST00000122063 Rbm25B2RY56 838 aaKnown RBP14.07□□□□□ -0.16
Ift88-201ENSMUST00000122063 Nutm1Q8BHP2 1126 aa14.06□□□□□ -0.16
Ift88-201ENSMUST00000122063 Adgrl1Q80TR1 1466 aa14.06□□□□□ -0.16
Ift88-201ENSMUST00000122063 Tmco5bQ80X59 307 aa14.06□□□□□ -0.16
Ift88-201ENSMUST00000122063 Hsp90ab1P11499 724 aaKnown RBP14.06□□□□□ -0.16
Ift88-201ENSMUST00000122063 HnrnpmQ9D0E1 729 aaKnown RBP14.05□□□□□ -0.16
Ift88-201ENSMUST00000122063 Nectin2P32507 530 aa14.04□□□□□ -0.16
Ift88-201ENSMUST00000122063 Ak7Q9D2H2 614 aa14.04□□□□□ -0.16
Ift88-201ENSMUST00000122063 Med14A2ABV5 1459 aaKnown RBP14.04□□□□□ -0.16
Ift88-201ENSMUST00000122063 Mcm10Q0VBD2 885 aa14.04□□□□□ -0.16
Ift88-201ENSMUST00000122063 Fam135bQ9DAI6 1403 aa14.03□□□□□ -0.16
Ift88-201ENSMUST00000122063 Sox12Q04890 314 aa14.03□□□□□ -0.16
Ift88-201ENSMUST00000122063 Dnai1Q8C0M8 701 aa14.03□□□□□ -0.16
Ift88-201ENSMUST00000122063 Sart3Q9JLI8 962 aaKnown RBP14.03□□□□□ -0.16
Ift88-201ENSMUST00000122063 Plekhg1F6S200 1446 aa14.03□□□□□ -0.16
Ift88-201ENSMUST00000122063 Eif2s2Q99L45 331 aaKnown RBP14.03□□□□□ -0.16
Ift88-201ENSMUST00000122063 U2surpQ6NV83 1029 aaKnown RBP14.02□□□□□ -0.16
Ift88-201ENSMUST00000122063 KarsQ99MN1 595 aaKnown RBP14.02□□□□□ -0.16
Ift88-201ENSMUST00000122063 CastP51125 788 aa14.02□□□□□ -0.17
Ift88-201ENSMUST00000122063 Swt1Q9DBQ9 907 aa14.02□□□□□ -0.17
Ift88-201ENSMUST00000122063 Ankrd50F7BE84 1390 aa14.01□□□□□ -0.17
Ift88-201ENSMUST00000122063 Uhrf1bp1lA2RSJ4 1457 aa14.01□□□□□ -0.17
Ift88-201ENSMUST00000122063 NktrP30415 1453 aa14.01□□□□□ -0.17
Ift88-201ENSMUST00000122063 Ccdc183A2AJB1 534 aa14.01□□□□□ -0.17
Ift88-201ENSMUST00000122063 Ipo8Q7TMY7 1010 aa14.01□□□□□ -0.17
Ift88-201ENSMUST00000122063 Znf521Q6KAS7 1311 aa14.01□□□□□ -0.17
Ift88-201ENSMUST00000122063 IghaA0A0A6YXW6 389 aa14.01□□□□□ -0.17
Ift88-201ENSMUST00000122063 Iqcf3Q9D498 203 aa14.01□□□□□ -0.17
Ift88-201ENSMUST00000122063 G3bp1P97855 465 aaKnown RBP14□□□□□ -0.17
Ift88-201ENSMUST00000122063 Cabp2Q9JLK4 216 aa14□□□□□ -0.17
Ift88-201ENSMUST00000122063 Zc3h13E9Q784 1729 aaKnown RBP14□□□□□ -0.17
Ift88-201ENSMUST00000122063 DaxxO35613 739 aa14□□□□□ -0.17
Ift88-201ENSMUST00000122063 Nkx1-2P42580 305 aa13.99□□□□□ -0.17
Ift88-201ENSMUST00000122063 Maco1Q7TQE6 664 aaKnown RBP13.99□□□□□ -0.17
Ift88-201ENSMUST00000122063 RictorQ6QI06 1708 aa13.99□□□□□ -0.17
Ift88-201ENSMUST00000122063 Nwd1A6H603 1563 aa13.99□□□□□ -0.17
Ift88-201ENSMUST00000122063 1700019A02RikA0A087WPV9 146 aa13.99□□□□□ -0.17
Ift88-201ENSMUST00000122063 Ppm1gQ61074 542 aa13.98□□□□□ -0.17
Ift88-201ENSMUST00000122063 Cdc37l1Q9CZP7 335 aa13.98□□□□□ -0.17
Ift88-201ENSMUST00000122063 Trim28Q62318 834 aa13.98□□□□□ -0.17
Ift88-201ENSMUST00000122063 Ttc21aQ8C0S4 1314 aa13.98□□□□□ -0.17
Ift88-201ENSMUST00000122063 Dip2aQ8BWT5 1523 aa13.97□□□□□ -0.17
Ift88-201ENSMUST00000122063 Pnmal2G3X9N3 661 aa13.97□□□□□ -0.17
Ift88-201ENSMUST00000122063 Ppp1r15aP17564 657 aa13.97□□□□□ -0.17
Ift88-201ENSMUST00000122063 Q4VA45 678 aa13.97□□□□□ -0.17
Ift88-201ENSMUST00000122063 Ciz1Q8VEH2 845 aa13.97□□□□□ -0.17
Ift88-201ENSMUST00000122063 MpripP97434 1024 aa13.97□□□□□ -0.17
Ift88-201ENSMUST00000122063 Idi2Q8BFZ6 227 aa13.97□□□□□ -0.17
Ift88-201ENSMUST00000122063 PplQ9R269 1755 aa13.97□□□□□ -0.17
Ift88-201ENSMUST00000122063 PaskQ8CEE6 1383 aa13.96□□□□□ -0.17
Ift88-201ENSMUST00000122063 Zmym3Q9JLM4 1370 aa13.96□□□□□ -0.17
Ift88-201ENSMUST00000122063 Pibf1E9Q6K3 756 aa13.95□□□□□ -0.18
Ift88-201ENSMUST00000122063 Fchsd2Q3USJ8 740 aa13.95□□□□□ -0.18
Ift88-201ENSMUST00000122063 Ppp2r3aB2RXC8 1150 aa13.94□□□□□ -0.18
Ift88-201ENSMUST00000122063 Klhdc4Q921I2 584 aa13.94□□□□□ -0.18
Ift88-201ENSMUST00000122063 CatipB9EKE5 520 aa13.94□□□□□ -0.18
Ift88-201ENSMUST00000122063 AU019823E9PUQ3 292 aa13.94□□□□□ -0.18
Ift88-201ENSMUST00000122063 Rsph6aQ8CDR2 708 aa13.94□□□□□ -0.18
Ift88-201ENSMUST00000122063 Usp16Q99LG0 825 aa13.94□□□□□ -0.18
Ift88-201ENSMUST00000122063 Ccdc171E9Q1U1 1324 aa13.93□□□□□ -0.18
Ift88-201ENSMUST00000122063 Q3UJC8 639 aa13.93□□□□□ -0.18
Ift88-201ENSMUST00000122063 4933416C03RikQ3V063 378 aa13.93□□□□□ -0.18
Ift88-201ENSMUST00000122063 Bcl11aQ9QYE3 773 aa13.92□□□□□ -0.18
Ift88-201ENSMUST00000122063 Uhrf1bp1B2KF50 1429 aa13.92□□□□□ -0.18
Ift88-201ENSMUST00000122063 Nsd3Q6P2L6 1439 aa13.92□□□□□ -0.18
Ift88-201ENSMUST00000122063 Hsp90aa1P07901 733 aaKnown RBP13.92□□□□□ -0.18
Ift88-201ENSMUST00000122063 Plekhm2Q80TQ5 1018 aa13.92□□□□□ -0.18
Ift88-201ENSMUST00000122063 MyclP10166 368 aa13.92□□□□□ -0.18
Ift88-201ENSMUST00000122063 Stk31Q99MW1 1018 aa13.92□□□□□ -0.18
Ift88-201ENSMUST00000122063 Mfap1aC0HKD8 439 aaKnown RBP13.91□□□□□ -0.18
Ift88-201ENSMUST00000122063 Mfap1bC0HKD9 439 aaKnown RBP13.91□□□□□ -0.18
Ift88-201ENSMUST00000122063 Gnai1B2RSH2 354 aa13.91□□□□□ -0.18
Ift88-201ENSMUST00000122063 Gnai3Q9DC51 354 aa13.91□□□□□ -0.18
Ift88-201ENSMUST00000122063 Dip2bQ3UH60 1574 aa13.9□□□□□ -0.18
Ift88-201ENSMUST00000122063 Chd4Q6PDQ2 1915 aaKnown RBP13.9□□□□□ -0.18
Ift88-201ENSMUST00000122063 Q3UPC7 1272 aa13.9□□□□□ -0.18
Ift88-201ENSMUST00000122063 Ncbp3Q8BZR9 615 aaKnown RBP13.9□□□□□ -0.18
Ift88-201ENSMUST00000122063 Pik3c2bE9QAN8 1632 aa13.89□□□□□ -0.19
Ift88-201ENSMUST00000122063 Eif4a2P10630 407 aa13.89□□□□□ -0.19
Ift88-201ENSMUST00000122063 Gemin5Q8BX17 1502 aaKnown RBP13.89□□□□□ -0.19
Ift88-201ENSMUST00000122063 PtpruB1AUH1 1446 aa13.89□□□□□ -0.19
Ift88-201ENSMUST00000122063 PzpQ61838 1495 aa13.89□□□□□ -0.19
Ift88-201ENSMUST00000122063 Pik3r4Q8VD65 1358 aa13.89□□□□□ -0.19
Ift88-201ENSMUST00000122063 Usp32F8VPZ3 1604 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms