RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 PappaQ8R4K8 1624 aa13.06□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Stag3O70576 1240 aa13.06□□□□□ -0.32
Prpf39-201ENSMUST00000120580 MlecQ6ZQI3 291 aaKnown RBP13.05□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Q3UJC8 639 aa13.05□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Gm38655A0A286YDK6 273 aa13.04□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Q7TT23 1179 aa13.04□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Gsto1O09131 240 aa13.04□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Trim28Q62318 834 aa13.04□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Tmem94Q7TSH8 1360 aa13.04□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Mast2Q60592 1734 aa13.03□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Rapgef3Q8VCC8 918 aa13.02□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Wwc2Q6NXJ0 1187 aa13.01□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Casz1Q9CWL2 1761 aa13.01□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Uhrf1bp1B2KF50 1429 aa13.01□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Nop58Q6DFW4 536 aaKnown RBP13.01□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Uhrf1bp1lA2RSJ4 1457 aa13□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Kif7B7ZNG0 1348 aa13□□□□□ -0.33
Prpf39-201ENSMUST00000120580 FanciQ8K368 1330 aa13□□□□□ -0.33
Prpf39-201ENSMUST00000120580 IqubQ8CDK3 788 aa12.99□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Kat6bQ8BRB7 1872 aa12.98□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Astn2Q80Z10 1352 aa12.98□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Slc35g1Q8BY79 368 aa12.98□□□□□ -0.33
Prpf39-201ENSMUST00000120580 CatipB9EKE5 520 aa12.98□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Ttc41Q692V3 1318 aa12.97□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Slain2Q8CI08 581 aa12.97□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Dlg5E9Q9R9 1921 aa12.97□□□□□ -0.33
Prpf39-201ENSMUST00000120580 P3h3Q8CG70 732 aa12.97□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Fer1l6E0CZ42 1862 aa12.96□□□□□ -0.33
Prpf39-201ENSMUST00000120580 MyclP10166 368 aa12.96□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Gm10563F6WIE4 79 aa12.96□□□□□ -0.33
Prpf39-201ENSMUST00000120580 BcorQ8CGN4 1759 aa12.96□□□□□ -0.33
Prpf39-201ENSMUST00000120580 Zbtb4Q5F293 982 aa12.96□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Cald1E9QA15 768 aaKnown RBP12.95□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Atp7bQ64446 1462 aa12.95□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Zmym3Q9JLM4 1370 aa12.95□□□□□ -0.34
Prpf39-201ENSMUST00000120580 FancaQ9JL70 1439 aa12.94□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Erbb3Q61526 1339 aa12.94□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Atp10bB1AWN4 1474 aa12.94□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Brinp3Q499E0 766 aa12.93□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Abca3Q8R420 1704 aa12.93□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Kif16bB1AVY7 1312 aa12.93□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Ncapd2Q8K2Z4 1392 aa12.93□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Tjp1P39447 1745 aaKnown RBP12.92□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Nup153E9Q3G8 1462 aaKnown RBP12.92□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Cnga1P29974 684 aa12.91□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Q4VA45 678 aa12.91□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Nhsl1Q8CAF4 1587 aa12.91□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Dcaf11Q91VU6 549 aa12.9□□□□□ -0.34
Prpf39-201ENSMUST00000120580 Ano8Q6PB70 1060 aa12.89□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Nckap5lQ6GQX2 1323 aa12.89□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Sipa1l3G3X9J0 1776 aa12.88□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Akap11E9Q777 1895 aa12.88□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Wdr17E9Q271 1322 aa12.88□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Nlgn1Q99K10 843 aa12.88□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Hoxb7P09024 217 aa12.87□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Kcna6Q61923 529 aa12.87□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Ncbp3Q8BZR9 615 aaKnown RBP12.87□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Egfem1Q8C088 590 aa12.87□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Uspl1Q3ULM6 1089 aa12.86□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Tnrc6cQ3UHC0 1690 aaKnown RBP12.86□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Ncoa4Q5U4H9 625 aa12.85□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Slit1Q80TR4 1531 aa12.84□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Frmpd2A0A140LI67 1392 aa12.84□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Os9Q8K2C7 672 aa12.84□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Liat1Q810M6 228 aa12.84□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Map4k4P97820 1233 aaKnown RBP12.83□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Atp1b4Q99ME6 356 aa12.83□□□□□ -0.35
Prpf39-201ENSMUST00000120580 Kank1E9Q238 1360 aa12.83□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Scaf1Q5U4C3 1256 aaKnown RBP12.82□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Tns2Q8CGB6 1400 aa12.82□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Mrs2Q5NCE8 434 aa12.81□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Shank2Q80Z38 1476 aa12.81□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Zscan21Q07231 555 aa12.8□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Zfp444Q3TDV8 331 aaKnown RBP12.8□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Rsph6aQ8CDR2 708 aa12.8□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Nwd2Q6P5U7 1742 aa12.8□□□□□ -0.36
Prpf39-201ENSMUST00000120580 TnrQ8BYI9 1358 aa12.8□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Cacna1sQ02789 1880 aa12.8□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Col4a1P02463 1669 aa12.79□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Exosc9Q9JHI7 438 aaKnown RBP12.79□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Slc12a5Q91V14 1138 aa12.79□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Nolc1E9Q5C9 702 aaKnown RBP12.78□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Ddx17Q501J6 650 aaKnown RBP12.78□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Znf526Q8BI66 675 aa12.78□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Ppp1r15aP17564 657 aa12.78□□□□□ -0.36
Prpf39-201ENSMUST00000120580 L3mbtl2P59178 703 aa12.78□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Kndc1Q0KK55 1742 aa12.78□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Esx1O88933 382 aa12.78□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Rad17Q6NXW6 688 aa12.78□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Col15a1O35206 1367 aa12.77□□□□□ -0.36
Prpf39-201ENSMUST00000120580 Ltbp1Q8CG19 1712 aa12.77□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Tiam2Q6ZPF3 1715 aa12.76□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Gas2l2Q5SSG4 860 aa12.76□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Ly75Q60767 1723 aa12.76□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Eif4a2P10630 407 aa12.76□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Znf316Q6PGE4 1016 aa12.76□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Lrp6O88572 1613 aa12.76□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Msh6P54276 1358 aaKnown RBP12.74□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Fam71e1A1L3C1 212 aa12.74□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Nkx2-3P97334 362 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms