RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Casq1O09165 405 aa12.54□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Afap1Q80YS6 731 aa12.54□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Polr3aB2RXC6 1390 aa12.54□□□□□ -0.4
Ctc1-202ENSMUST00000116359 AU019823E9PUQ3 292 aa12.54□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Zmynd15Q8C0R7 736 aa12.54□□□□□ -0.4
Ctc1-202ENSMUST00000116359 BbxQ8VBW5 907 aa12.54□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Atf7ipQ7TT18 1306 aa12.53□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Nlrp6Q91WS2 869 aa12.53□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Mrvi1Q9WUX5 899 aaKnown RBP12.53□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Rsph4aQ8BYM7 716 aa12.53□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Prex2Q3LAC4 1598 aa12.53□□□□□ -0.4
Ctc1-202ENSMUST00000116359 E4f1Q8CCE9 783 aa12.53□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Golga2Q921M4 999 aa12.53□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Ncoa3O09000 1398 aa12.52□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Gm45140A0A0N4SUM8 220 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Tbc1d31Q6NXY1 996 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Kdm4aQ8BW72 1064 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Kdm4cQ8VCD7 1054 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Chd1lQ9CXF7 900 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Ppp1r3fQ9JIG4 799 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Rapgef6Q5NCJ1 1609 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Adgrb2Q8CGM1 1561 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Ncapd2Q8K2Z4 1392 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Kiaa0754Q69ZZ9 979 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Arhgap4B1AUY3 965 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Slc4a1apE9PX68 744 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Ralbp1Q62172 648 aa12.51□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Gpatch11Q3UFS4 262 aa12.5□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Ube2q2Q8K2Z8 378 aa12.5□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Atxn3Q9CVD2 355 aa12.5□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Setd1aE9PYH6 1716 aa12.5□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Aplp1Q03157 653 aa12.5□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Stk11ipQ3TAA7 1072 aa12.5□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Sass6Q80UK7 654 aa12.5□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Fam135bQ9DAI6 1403 aa12.5□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Nxf2Q4ZGD8 691 aa12.49□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Irx4Q9QY61 515 aa12.49□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Dync1i1O88485 628 aa12.49□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Bach2P97303 839 aa12.49□□□□□ -0.41
Ctc1-202ENSMUST00000116359 OvosQ3UU35 1456 aa12.49□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Glipr1l2Q9CQ35 332 aa12.48□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Il16O54824 1322 aa12.48□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Fbxo3Q9DC63 480 aa12.48□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Capn2O08529 700 aa12.47□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Kdm3bQ6ZPY7 1562 aa12.47□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Map3k5O35099 1380 aa12.47□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Kif3bQ61771 747 aa12.47□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Arhgef40Q3UPH7 1517 aa12.47□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Trim30aP15533 496 aa12.47□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Uspl1Q3ULM6 1089 aa12.47□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Olfml1Q8BSH2 233 aa12.47□□□□□ -0.41
Ctc1-202ENSMUST00000116359 IqubQ8CDK3 788 aa12.47□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Gripap1Q8VD04 806 aa12.46□□□□□ -0.41
Ctc1-202ENSMUST00000116359 KnstrnQ9D9Z1 312 aaKnown RBP12.46□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Swt1Q9DBQ9 907 aa12.46□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Kdm6bQ5NCY0 1641 aa12.46□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Iqgap1Q9JKF1 1657 aaKnown RBP12.46□□□□□ -0.41
Ctc1-202ENSMUST00000116359 Irx2P81066 474 aa12.46□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Prr29B1ARI9 187 aa12.45□□□□□ -0.42
Ctc1-202ENSMUST00000116359 NhsB1AV60 1647 aa12.45□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Zkscan1Q8BGS3 561 aaKnown RBP12.45□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Gadd45bP22339 160 aa12.45□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Ptch1Q61115 1434 aa12.45□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Synj2Q9D2G5 1434 aa12.45□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Plin1Q8CGN5 517 aa12.45□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Rnf17Q99MV7 1640 aa12.45□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Hvcn1Q3U2S8 269 aa12.44□□□□□ -0.42
Ctc1-202ENSMUST00000116359 KdrP35918 1367 aa12.44□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Arid4aF8VPQ2 1261 aaKnown RBP12.44□□□□□ -0.42
Ctc1-202ENSMUST00000116359 DroshaQ5HZJ0 1373 aaKnown RBP12.44□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Kif4P33174 1231 aa12.44□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Rangap1P46061 589 aaKnown RBP12.44□□□□□ -0.42
Ctc1-202ENSMUST00000116359 RbsnQ80Y56 783 aa12.44□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Mroh2aD3Z750 1679 aa12.43□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Brpf1B2RRD7 1212 aa12.43□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Gm16486A0A1D5RMD1 1434 aa12.43□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Map7d2A2AG50 781 aa12.43□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Samd1D3YXK1 519 aa12.43□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Ksr2Q3UVC0 959 aa12.43□□□□□ -0.42
Ctc1-202ENSMUST00000116359 SkilQ60665 675 aa12.43□□□□□ -0.42
Ctc1-202ENSMUST00000116359 AglF8VPN4 1532 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Myom2Q14BI5 1463 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Kif7B7ZNG0 1348 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Erich6D3Z6S9 713 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Brd1E9PZ26 1189 aaKnown RBP12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Fam184bQ0KK56 942 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Tbc1d9Q3UYK3 1264 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Ccdc96Q9CR92 584 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 NpatQ8BMA5 1420 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Anapc15-psA0A140T8L6 141 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Ccdc173A0JLY1 547 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Ica1lQ3TY65 431 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 SrrtQ99MR6 875 aaKnown RBP12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Fez2Q6TYB5 348 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Atp2b2Q9R0K7 1198 aa12.42□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Nup155Q99P88 1391 aaKnown RBP12.41□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Zdhhc9P59268 364 aa12.41□□□□□ -0.42
Ctc1-202ENSMUST00000116359 Trappc8E9PWG2 1437 aa12.41□□□□□ -0.42
Ctc1-202ENSMUST00000116359 1700017N19RikA0A087WPJ1 469 aa12.41□□□□□ -0.42
Ctc1-202ENSMUST00000116359 1700010I14RikQ7TPG0 532 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms