RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Cwc27Q3TKY6 469 aa20.01■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Kif16bB1AVY7 1312 aa20.01■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Kif20aP97329 887 aa20.01■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Rapgef4Q9EQZ6 1011 aa20.01■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Dhx8A2A4P0 1244 aaKnown RBP20■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Ccdc178Q8CDV0 866 aa20■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Smarca4Q3TKT4 1613 aaKnown RBP20■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Prl7d1P04769 244 aa20■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Rabep1O35551 862 aa20■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Necab1Q8BG18 352 aa20■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Nsd2Q8BVE8 1365 aa19.99■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Erc1Q99MI1 1120 aa19.99■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Ccdc34Q3UI66 367 aa19.99■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Nup133Q8R0G9 1155 aa19.99■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Trim34aQ99PP6 485 aa19.98■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Trim34bJ3QNR8 485 aa19.98■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Hs1bp3Q3TC93 395 aa19.98■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Btbd11Q6GQW0 1109 aa19.98■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Lrrcc1Q69ZB0 1026 aa19.98■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Atad2bE9Q166 1460 aaKnown RBP19.98■□□□□ 0.79
Shroom3-201ENSMUST00000113051 NgdnQ9DB96 315 aaKnown RBP19.97■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Galntl5Q9D4M9 431 aa19.97■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Gnai2P08752 355 aaKnown RBP19.97■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Plekhd1B2RPU2 505 aa19.96■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Pnmal2G3X9N3 661 aa19.96■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Cd109Q8R422 1442 aa19.96■□□□□ 0.79
Shroom3-201ENSMUST00000113051 Cfap69Q8BH53 942 aa19.96■□□□□ 0.79
Shroom3-201ENSMUST00000113051 SfswapQ3USH5 945 aaKnown RBP19.95■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Taf3Q5HZG4 932 aa19.95■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Ankib1Q6ZPS6 1085 aa19.95■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Ints3Q7TPD0 1041 aaKnown RBP19.95■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Ssr1Q9CY50 286 aaKnown RBP19.95■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Ppp2r1aQ76MZ3 589 aa19.95■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Prpf4bQ61136 1007 aaKnown RBP19.95■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Spty2d1Q68FG3 682 aa19.95■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Mre11Q61216 706 aa19.95■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Nphp1Q9QY53 687 aa19.95■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Secisbp2lQ6A098 1086 aaKnown RBP19.95■□□□□ 0.78
Shroom3-201ENSMUST00000113051 PalmQ9Z0P4 383 aa19.94■□□□□ 0.78
Shroom3-201ENSMUST00000113051 GnpatP98192 678 aa19.94■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Rrs1Q9CYH6 365 aaKnown RBP19.93■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Cchcr1Q8K2I2 770 aa19.93■□□□□ 0.78
Shroom3-201ENSMUST00000113051 NaspQ99MD9 773 aaKnown RBP19.93■□□□□ 0.78
Shroom3-201ENSMUST00000113051 SelenooQ9DBC0 667 aa19.93■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Hmgn5Q9JL35 406 aa19.93■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Stk38Q91VJ4 465 aa19.92■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Cc2d2aQ8CFW7 1633 aa19.92■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Srgap3Q812A2 1099 aa19.92■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Glipr1l2Q9CQ35 332 aa19.92■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Zkscan2G3X952 960 aa19.92■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Ubxn4Q8VCH8 506 aa19.91■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Zrsr2Q62377 462 aaKnown RBP19.91■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Cetn4Q8K4K1 168 aa19.91■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Jakmip1Q8BVL9 626 aa19.91■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Gimap6Q8K349 305 aa19.9■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Smc2Q8CG48 1191 aaKnown RBP19.9■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Flad1Q8R123 492 aa19.89■□□□□ 0.78
Shroom3-201ENSMUST00000113051 Kcnj4P52189 445 aa19.89■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Ltv1Q6NSQ7 470 aaKnown RBP19.89■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Cavin4A2AMM0 362 aa19.89■□□□□ 0.77
Shroom3-201ENSMUST00000113051 SkilQ60665 675 aa19.88■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Ccdc183A2AJB1 534 aa19.88■□□□□ 0.77
Shroom3-201ENSMUST00000113051 4930572O03RikQ8C5Y0 211 aa19.88■□□□□ 0.77
Shroom3-201ENSMUST00000113051 TkfcQ8VC30 578 aa19.88■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Arhgap31A6X8Z5 1425 aa19.88■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Fbxo2Q80UW2 297 aa19.87■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Q9D9S1 216 aa19.87■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Cux1P53564 1515 aa19.87■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Wdhd1P59328 1117 aa19.87■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Tnni2P13412 182 aa19.87■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Slc13a4Q8BZ82 625 aa19.87■□□□□ 0.77
Shroom3-201ENSMUST00000113051 IncenpQ9WU62 880 aa19.86■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Kif3aP28741 701 aa19.86■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Cttnbp2B9EJA2 1648 aa19.86■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Fsd1Q7TPM6 496 aa19.86■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Ccdc155Q80VJ8 648 aa19.86■□□□□ 0.77
Shroom3-201ENSMUST00000113051 OptnQ8K3K8 584 aa19.86■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Cdc37l1Q9CZP7 335 aa19.86■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Rai14Q9EP71 979 aaKnown RBP19.86■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Igf2bp2Q5SF07 592 aaKnown RBP19.85■□□□□ 0.77
Shroom3-201ENSMUST00000113051 NefhP19246 1090 aa19.84■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Fkbp5Q64378 456 aa19.84■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Nol7Q9D7Z3 254 aaKnown RBP19.84■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Iqgap2Q3UQ44 1575 aa19.84■□□□□ 0.77
Shroom3-201ENSMUST00000113051 GlmnQ8BZM1 596 aa19.84■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Nlrp3Q8R4B8 1033 aa19.84■□□□□ 0.77
Shroom3-201ENSMUST00000113051 PsapQ61207 557 aaKnown RBP19.84■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Cnnm3Q32NY4 713 aa19.83■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Slc5a4bQ91ZP4 660 aa19.83■□□□□ 0.77
Shroom3-201ENSMUST00000113051 Dusp27Q148W8 1138 aa19.83■□□□□ 0.76
Shroom3-201ENSMUST00000113051 Ccdc171E9Q1U1 1324 aa19.83■□□□□ 0.76
Shroom3-201ENSMUST00000113051 Vps37dQ810I0 261 aa19.83■□□□□ 0.76
Shroom3-201ENSMUST00000113051 Ift140E9PY46 1464 aa19.83■□□□□ 0.76
Shroom3-201ENSMUST00000113051 Ppp2r3aB2RXC8 1150 aa19.82■□□□□ 0.76
Shroom3-201ENSMUST00000113051 Tnpo1Q8BFY9 898 aaKnown RBP19.82■□□□□ 0.76
Shroom3-201ENSMUST00000113051 Gprasp1Q5U4C1 1347 aa19.82■□□□□ 0.76
Shroom3-201ENSMUST00000113051 Cog6Q8R3I3 657 aa19.82■□□□□ 0.76
Shroom3-201ENSMUST00000113051 Lrrfip2Q91WK0 415 aa19.82■□□□□ 0.76
Shroom3-201ENSMUST00000113051 Prdm16A2A935 1275 aa19.82■□□□□ 0.76
Shroom3-201ENSMUST00000113051 Q4VA45 678 aa19.81■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms