RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 Efcab6Q6P1E8 1516 aa10.45□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Eif4g2Q62448 906 aaKnown RBP10.44□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Setd1aE9PYH6 1716 aa10.44□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Duxf3A0A0N4SV92 674 aa10.44□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Ppp1r15aP17564 657 aa10.44□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Mcm10Q0VBD2 885 aa10.44□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Kiaa1107Q80TK0 1369 aa10.44□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Hsp90b1P08113 802 aaKnown RBP10.44□□□□□ -0.74
Bdnf-202ENSMUST00000111042 CastP51125 788 aa10.44□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Yeats2Q3TUF7 1407 aa10.44□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Usp19Q3UJD6 1360 aa10.43□□□□□ -0.74
Bdnf-202ENSMUST00000111042 SkilQ60665 675 aa10.43□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Kidins220E9Q9B7 1793 aa10.43□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Abca6Q8K441 1624 aa10.43□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Scaf11E9PZM7 1456 aaKnown RBP10.43□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Hfm1D3Z4R1 1434 aa10.42□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Q3UJC8 639 aa10.42□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Rabep1O35551 862 aa10.42□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Plekhm2Q80TQ5 1018 aa10.42□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Idi2Q8BFZ6 227 aa10.42□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Depdc5P61460 1591 aa10.41□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Kdm5aQ3UXZ9 1690 aa10.41□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Kdm2bQ6P1G2 1309 aa10.41□□□□□ -0.74
Bdnf-202ENSMUST00000111042 CatipB9EKE5 520 aa10.41□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Ggnbp2Q5SV77 696 aa10.41□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Tnpo1Q8BFY9 898 aaKnown RBP10.41□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Cgnl1Q6AW69 1298 aa10.4□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Gprasp1Q5U4C1 1347 aa10.4□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Cog6Q8R3I3 657 aa10.4□□□□□ -0.74
Bdnf-202ENSMUST00000111042 P2rx7Q9Z1M0 595 aa10.4□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Rfx1P48377 963 aa10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Dennd6aQ8BH65 605 aa10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Kif18aQ91WD7 886 aa10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 TnikP83510 1323 aa10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Robo2Q7TPD3 1470 aa10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Q3UPC7 1272 aa10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 TmpoQ61033 693 aaKnown RBP10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Adgrl3Q80TS3 1537 aa10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Irx3P81067 507 aa10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Rims1Q99NE5 1463 aa10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Nek4Q9Z1J2 792 aa10.39□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Pdcd11Q6NS46 1862 aaKnown RBP10.38□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Map3k19E9Q3S4 1311 aa10.38□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Cep152A2AUM9 1736 aaKnown RBP10.38□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Sv2bQ8BG39 683 aa10.38□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Aldh1l1Q8R0Y6 902 aa10.38□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Atp10aO54827 1508 aa10.38□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Fyb1O35601 819 aa10.38□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Cetn4Q8K4K1 168 aa10.38□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Uggt1Q6P5E4 1551 aa10.37□□□□□ -0.75
Bdnf-202ENSMUST00000111042 MvpQ9EQK5 861 aa10.37□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Rlbp1Q9Z275 317 aa10.37□□□□□ -0.75
Bdnf-202ENSMUST00000111042 NpatQ8BMA5 1420 aa10.37□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Synj2Q9D2G5 1434 aa10.37□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Myom2Q14BI5 1463 aa10.36□□□□□ -0.75
Bdnf-202ENSMUST00000111042 TatQ8QZR1 454 aa10.36□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Klhdc4Q921I2 584 aa10.36□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Ppp1r3fQ9JIG4 799 aa10.36□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Ttc41Q692V3 1318 aa10.36□□□□□ -0.75
Bdnf-202ENSMUST00000111042 PaskQ8CEE6 1383 aa10.36□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Xrn1P97789 1719 aaKnown RBP10.35□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Iqgap3F8VQ29 1632 aa10.35□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Gm10563F6WIE4 79 aa10.35□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Rsph6aQ8CDR2 708 aa10.35□□□□□ -0.75
Bdnf-202ENSMUST00000111042 HypkQ9CR41 129 aa10.35□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Rab11fip3Q8CHD8 1047 aa10.35□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Ankrd50F7BE84 1390 aa10.34□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Sptbn5F6UCX4 1208 aa10.34□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Aplp1Q03157 653 aa10.34□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Slc4a10Q5DTL9 1118 aa10.34□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Ak9G3UYQ4 1894 aa10.34□□□□□ -0.75
Bdnf-202ENSMUST00000111042 MccE9PWI3 1003 aa10.34□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Plxnc1Q9QZC2 1574 aa10.34□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Adgrb3Q80ZF8 1522 aa10.34□□□□□ -0.75
Bdnf-202ENSMUST00000111042 Q9D2X8 372 aa10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Myo5cE9Q1F5 1742 aa10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Itsn2Q9Z0R6 1659 aa10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Abca9Q8K449 1623 aa10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Naip7Q9JIB3 1402 aa10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Prex1Q69ZK0 1650 aa10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Sos1Q62245 1319 aa10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Vamp4O70480 141 aa10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Eif4a2P10630 407 aa10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Dnttip2Q8R2M2 758 aaKnown RBP10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Fam135bQ9DAI6 1403 aa10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 CarsQ9ER72 831 aaKnown RBP10.33□□□□□ -0.76
Bdnf-202ENSMUST00000111042 AU019823E9PUQ3 292 aa10.32□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Gsdma3Q5Y4Y6 464 aa10.32□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Ccne1Q61457 408 aa10.32□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Ppp1r9bQ6R891 817 aaKnown RBP10.32□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Stk11ipQ3TAA7 1072 aa10.32□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Rtn4Q99P72 1162 aaKnown RBP10.32□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Nkx1-2P42580 305 aa10.32□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Trim44Q9QXA7 346 aa10.32□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Ankrd44B2RXR6 993 aa10.31□□□□□ -0.76
Bdnf-202ENSMUST00000111042 PtmaP26350 111 aa10.31□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Bcl2l13P59017 434 aa10.31□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Knl1Q66JQ7 1612 aa10.31□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Ttc21aQ8C0S4 1314 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms