RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Apaf1O88879 1249 aa19.51■□□□□ 0.71
Trim11-203ENSMUST00000108810 Znf316Q6PGE4 1016 aa19.51■□□□□ 0.71
Trim11-203ENSMUST00000108810 Rwdd1Q9CQK7 243 aa19.51■□□□□ 0.71
Trim11-203ENSMUST00000108810 Topaz1E5FYH1 1653 aa19.5■□□□□ 0.71
Trim11-203ENSMUST00000108810 CatipB9EKE5 520 aa19.5■□□□□ 0.71
Trim11-203ENSMUST00000108810 Tcerg1Q8CGF7 1100 aaKnown RBP19.5■□□□□ 0.71
Trim11-203ENSMUST00000108810 Atxn3Q9CVD2 355 aa19.5■□□□□ 0.71
Trim11-203ENSMUST00000108810 Q3UJC8 639 aa19.48■□□□□ 0.71
Trim11-203ENSMUST00000108810 Abcc10Q8R4P9 1501 aa19.48■□□□□ 0.71
Trim11-203ENSMUST00000108810 Mon2Q80TL7 1715 aa19.48■□□□□ 0.71
Trim11-203ENSMUST00000108810 Uhrf1bp1B2KF50 1429 aa19.47■□□□□ 0.71
Trim11-203ENSMUST00000108810 Rims2Q9EQZ7 1530 aa19.47■□□□□ 0.71
Trim11-203ENSMUST00000108810 Mdc1Q5PSV9 1707 aa19.47■□□□□ 0.71
Trim11-203ENSMUST00000108810 Mbd3Q9Z2D8 285 aaKnown RBP19.47■□□□□ 0.71
Trim11-203ENSMUST00000108810 NalcnQ8BXR5 1738 aa19.46■□□□□ 0.71
Trim11-203ENSMUST00000108810 NeflP08551 543 aa19.45■□□□□ 0.7
Trim11-203ENSMUST00000108810 Slc12a5Q91V14 1138 aa19.45■□□□□ 0.7
Trim11-203ENSMUST00000108810 Fam71e1A1L3C1 212 aa19.45■□□□□ 0.7
Trim11-203ENSMUST00000108810 Med1Q925J9 1575 aa19.44■□□□□ 0.7
Trim11-203ENSMUST00000108810 Uhrf1bp1lA2RSJ4 1457 aa19.44■□□□□ 0.7
Trim11-203ENSMUST00000108810 Spef2Q8C9J3 1734 aa19.43■□□□□ 0.7
Trim11-203ENSMUST00000108810 Pik3c2aQ61194 1686 aa19.43■□□□□ 0.7
Trim11-203ENSMUST00000108810 Slc4a3P16283 1227 aa19.42■□□□□ 0.7
Trim11-203ENSMUST00000108810 GphnQ8BUV3 769 aaKnown RBP19.42■□□□□ 0.7
Trim11-203ENSMUST00000108810 Ppp1r15aP17564 657 aa19.42■□□□□ 0.7
Trim11-203ENSMUST00000108810 Supt16hQ920B9 1047 aa19.42■□□□□ 0.7
Trim11-203ENSMUST00000108810 Znf335A2A5K6 1337 aa19.41■□□□□ 0.7
Trim11-203ENSMUST00000108810 Hoxb7P09024 217 aa19.41■□□□□ 0.7
Trim11-203ENSMUST00000108810 Dusp27Q148W8 1138 aa19.41■□□□□ 0.7
Trim11-203ENSMUST00000108810 Liat1Q810M6 228 aa19.41■□□□□ 0.7
Trim11-203ENSMUST00000108810 Astn2Q80Z10 1352 aa19.41■□□□□ 0.7
Trim11-203ENSMUST00000108810 Fam135bQ9DAI6 1403 aa19.41■□□□□ 0.7
Trim11-203ENSMUST00000108810 Alpk3Q924C5 1678 aa19.4■□□□□ 0.7
Trim11-203ENSMUST00000108810 Birc3O08863 600 aa19.4■□□□□ 0.7
Trim11-203ENSMUST00000108810 PalmQ9Z0P4 383 aa19.4■□□□□ 0.7
Trim11-203ENSMUST00000108810 Ubr1O70481 1757 aa19.4■□□□□ 0.7
Trim11-203ENSMUST00000108810 PaskQ8CEE6 1383 aa19.39■□□□□ 0.7
Trim11-203ENSMUST00000108810 Fchsd2Q3USJ8 740 aa19.39■□□□□ 0.69
Trim11-203ENSMUST00000108810 Q4VA45 678 aa19.39■□□□□ 0.69
Trim11-203ENSMUST00000108810 Ciz1Q8VEH2 845 aa19.39■□□□□ 0.69
Trim11-203ENSMUST00000108810 Mapk8ip3Q9ESN9 1337 aa19.39■□□□□ 0.69
Trim11-203ENSMUST00000108810 Thsd7aQ69ZU6 1645 aa19.38■□□□□ 0.69
Trim11-203ENSMUST00000108810 Scn7aB1AYL1 1681 aa19.38■□□□□ 0.69
Trim11-203ENSMUST00000108810 Cavin4A2AMM0 362 aa19.38■□□□□ 0.69
Trim11-203ENSMUST00000108810 Apbb1Q9QXJ1 710 aa19.38■□□□□ 0.69
Trim11-203ENSMUST00000108810 Atp7bQ64446 1462 aa19.38■□□□□ 0.69
Trim11-203ENSMUST00000108810 Col16a1Q8BLX7 1580 aa19.37■□□□□ 0.69
Trim11-203ENSMUST00000108810 Kdm2bQ6P1G2 1309 aa19.37■□□□□ 0.69
Trim11-203ENSMUST00000108810 Dnajc5P60904 198 aa19.37■□□□□ 0.69
Trim11-203ENSMUST00000108810 Rimbp3Q3V0F0 1606 aa19.37■□□□□ 0.69
Trim11-203ENSMUST00000108810 CemipQ8BI06 1361 aa19.36■□□□□ 0.69
Trim11-203ENSMUST00000108810 C3P01027 1663 aa19.35■□□□□ 0.69
Trim11-203ENSMUST00000108810 Map2P20357 1828 aa19.35■□□□□ 0.69
Trim11-203ENSMUST00000108810 MyclP10166 368 aa19.35■□□□□ 0.69
Trim11-203ENSMUST00000108810 Rsph6aQ8CDR2 708 aa19.35■□□□□ 0.69
Trim11-203ENSMUST00000108810 Cdk12Q14AX6 1484 aaKnown RBP19.35■□□□□ 0.69
Trim11-203ENSMUST00000108810 Znf521Q6KAS7 1311 aa19.34■□□□□ 0.69
Trim11-203ENSMUST00000108810 Ttc21aQ8C0S4 1314 aa19.33■□□□□ 0.69
Trim11-203ENSMUST00000108810 Idi1P58044 227 aa19.33■□□□□ 0.69
Trim11-203ENSMUST00000108810 Ankrd50F7BE84 1390 aa19.33■□□□□ 0.68
Trim11-203ENSMUST00000108810 Zmym3Q9JLM4 1370 aa19.33■□□□□ 0.68
Trim11-203ENSMUST00000108810 Ksr2Q3UVC0 959 aa19.33■□□□□ 0.68
Trim11-203ENSMUST00000108810 Camta1A2A891 1682 aa19.31■□□□□ 0.68
Trim11-203ENSMUST00000108810 Gm10563F6WIE4 79 aa19.3■□□□□ 0.68
Trim11-203ENSMUST00000108810 Ccar1Q8CH18 1146 aaKnown RBP19.3■□□□□ 0.68
Trim11-203ENSMUST00000108810 Col14a1Q80X19 1797 aa19.29■□□□□ 0.68
Trim11-203ENSMUST00000108810 Unc13bQ9Z1N9 1602 aa19.29■□□□□ 0.68
Trim11-203ENSMUST00000108810 Tmem94Q7TSH8 1360 aa19.29■□□□□ 0.68
Trim11-203ENSMUST00000108810 Trim58Q5NCC9 485 aa19.29■□□□□ 0.68
Trim11-203ENSMUST00000108810 Pank1Q8K4K6 548 aa19.28■□□□□ 0.68
Trim11-203ENSMUST00000108810 Phlpp1Q8CHE4 1687 aa19.28■□□□□ 0.68
Trim11-203ENSMUST00000108810 Swt1Q9DBQ9 907 aa19.28■□□□□ 0.68
Trim11-203ENSMUST00000108810 Tspyl2Q7TQI8 677 aa19.27■□□□□ 0.68
Trim11-203ENSMUST00000108810 PtprvP70289 1705 aa19.27■□□□□ 0.68
Trim11-203ENSMUST00000108810 Sipa1l2Q80TE4 1722 aa19.27■□□□□ 0.67
Trim11-203ENSMUST00000108810 Tns3Q5SSZ5 1440 aa19.26■□□□□ 0.67
Trim11-203ENSMUST00000108810 CastP51125 788 aa19.26■□□□□ 0.67
Trim11-203ENSMUST00000108810 NgefQ8CHT1 710 aa19.26■□□□□ 0.67
Trim11-203ENSMUST00000108810 Eif4a2P10630 407 aa19.25■□□□□ 0.67
Trim11-203ENSMUST00000108810 Sox12Q04890 314 aa19.24■□□□□ 0.67
Trim11-203ENSMUST00000108810 Pak3Q61036 559 aa19.24■□□□□ 0.67
Trim11-203ENSMUST00000108810 Slit2Q9R1B9 1521 aa19.22■□□□□ 0.67
Trim11-203ENSMUST00000108810 FancaQ9JL70 1439 aa19.22■□□□□ 0.67
Trim11-203ENSMUST00000108810 Rbm25B2RY56 838 aaKnown RBP19.22■□□□□ 0.67
Trim11-203ENSMUST00000108810 Mcm10Q0VBD2 885 aa19.22■□□□□ 0.67
Trim11-203ENSMUST00000108810 Frmpd2A0A140LI67 1392 aa19.22■□□□□ 0.67
Trim11-203ENSMUST00000108810 Egfem1Q8C088 590 aa19.22■□□□□ 0.67
Trim11-203ENSMUST00000108810 Nrxn3Q6P9K9 1571 aa19.21■□□□□ 0.67
Trim11-203ENSMUST00000108810 Polr3glQ8R0C0 218 aa19.21■□□□□ 0.67
Trim11-203ENSMUST00000108810 Parp14Q2EMV9 1817 aa19.21■□□□□ 0.67
Trim11-203ENSMUST00000108810 Ap3b2Q9JME5 1082 aa19.2■□□□□ 0.66
Trim11-203ENSMUST00000108810 Nlgn1Q99K10 843 aa19.2■□□□□ 0.66
Trim11-203ENSMUST00000108810 Trim26Q99PN3 545 aa19.2■□□□□ 0.66
Trim11-203ENSMUST00000108810 MlecQ6ZQI3 291 aaKnown RBP19.19■□□□□ 0.66
Trim11-203ENSMUST00000108810 Smc5Q8CG46 1101 aaKnown RBP19.19■□□□□ 0.66
Trim11-203ENSMUST00000108810 Ptpn23Q6PB44 1692 aa19.19■□□□□ 0.66
Trim11-203ENSMUST00000108810 Tet3Q8BG87 1668 aa19.19■□□□□ 0.66
Trim11-203ENSMUST00000108810 Ttll13A4Q9F6 804 aa19.19■□□□□ 0.66
Trim11-203ENSMUST00000108810 Ecm2Q5FW85 670 aa19.18■□□□□ 0.66
Trim11-203ENSMUST00000108810 Dennd6aQ8BH65 605 aa19.18■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms