RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Golim4Q8BXA1 655 aa12.4□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Taf3Q5HZG4 932 aa12.4□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Gripap1Q8VD04 806 aa12.4□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Cfap69Q8BH53 942 aa12.4□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Ccdc178Q8CDV0 866 aa12.4□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Ercc6lQ8BHK9 1240 aa12.4□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Frat2Q8K025 231 aa12.4□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Armc3A2AU72 881 aa12.39□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Ttc19Q8CC21 365 aa12.39□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Tmc1Q8R4P5 757 aa12.39□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Stk3Q9JI10 497 aa12.39□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Cyp46a1Q9WVK8 500 aa12.39□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Klc3Q91W40 508 aa12.39□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Puf60Q3UEB3 564 aaKnown RBP12.38□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Arhgef18Q6P9R4 1021 aa12.38□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Ca8P28651 291 aa12.38□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Olr1Q9EQ09 363 aa12.38□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Nap1l5Q9JJF0 156 aa12.38□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Ccdc88bQ4QRL3 1481 aa12.38□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Fkbp4P30416 458 aa12.38□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Kif20aP97329 887 aa12.38□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Mns1Q61884 491 aa12.38□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Trim58Q5NCC9 485 aa12.38□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Cecr2E9Q2Z1 1453 aa12.37□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Prdm16A2A935 1275 aa12.37□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Nlrp3Q8R4B8 1033 aa12.37□□□□□ -0.43
Scn9a-201ENSMUST00000100063 SelenooQ9DBC0 667 aa12.37□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Tmod2Q9JKK7 351 aa12.37□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Zscan10Q3URR7 782 aa12.37□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Galntl5Q9D4M9 431 aa12.37□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Cyp26c1B2RXA7 518 aa12.36□□□□□ -0.43
Scn9a-201ENSMUST00000100063 1700123L14RikQ3V2K7 440 aa12.36□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Rbm25B2RY56 838 aaKnown RBP12.36□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Znf287Q9EQB9 759 aa12.36□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Dapk1Q80YE7 1442 aa12.36□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Stxbp4Q9WV89 557 aa12.36□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Zmym3Q9JLM4 1370 aa12.36□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Ints3Q7TPD0 1041 aaKnown RBP12.36□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Krt84Q99M73 603 aa12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Kif16bB1AVY7 1312 aa12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Usp48Q3V0C5 1052 aa12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Dixdc1Q80Y83 711 aa12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Rfx1P48377 963 aa12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 MpripP97434 1024 aa12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Riok1Q922Q2 567 aa12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Cdca7Q9D0M2 382 aa12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Ccdc171E9Q1U1 1324 aa12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Rnf216P58283 853 aa12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Rbm27Q5SFM8 1060 aaKnown RBP12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Eif3bQ8JZQ9 803 aaKnown RBP12.35□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Urb2E9Q7L1 1524 aaKnown RBP12.34□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Ssr1Q9CY50 286 aaKnown RBP12.34□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Nol8Q3UHX0 1147 aaKnown RBP12.34□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Themis2Q91YX0 663 aa12.34□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Cdkl5Q3UTQ8 938 aa12.34□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Epb41l3Q9WV92 929 aa12.34□□□□□ -0.43
Scn9a-201ENSMUST00000100063 Smarca2Q6DIC0 1577 aa12.33□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Slc13a4Q8BZ82 625 aa12.33□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Cep112Q5PR68 954 aa12.32□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Tango6Q8C3S2 1079 aa12.32□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Kdm2bQ6P1G2 1309 aa12.32□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Stk38Q91VJ4 465 aa12.32□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Arhgap31A6X8Z5 1425 aa12.32□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Mipol1Q9D9F8 279 aa12.32□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Gsdma2Q32M21 443 aa12.32□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Mcm2P97310 904 aa12.32□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Rhot2Q8JZN7 620 aa12.32□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Nectin2P32507 530 aa12.32□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Cnksr2Q80YA9 1032 aa12.32□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Zscan20B2KFW1 1030 aa12.31□□□□□ -0.44
Scn9a-201ENSMUST00000100063 EappQ5BU09 281 aa12.31□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Gnai2P08752 355 aaKnown RBP12.31□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Ccdc141E9Q8Q6 1531 aa12.31□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Synj1Q8CHC4 1574 aa12.31□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Lrrfip1Q3UZ39 729 aaKnown RBP12.31□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Afap1Q80YS6 731 aa12.31□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Cetn1P41209 172 aa12.31□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Gimap5Q8BWF2 308 aa12.31□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Igf2bp2Q5SF07 592 aaKnown RBP12.3□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Pde3aQ9Z0X4 1141 aa12.3□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Zkscan2G3X952 960 aa12.3□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Arid3aQ62431 601 aa12.3□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Nup133Q8R0G9 1155 aa12.3□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Znf697Q569E7 569 aa12.3□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Cul5Q9D5V5 780 aa12.3□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Ccdc173A0JLY1 547 aa12.3□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Tubb6Q922F4 447 aa12.3□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Fkbp5Q64378 456 aa12.3□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Mrvi1Q9WUX5 899 aaKnown RBP12.3□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Prpf4bQ61136 1007 aaKnown RBP12.29□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Btbd11Q6GQW0 1109 aa12.29□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Strn4P58404 760 aa12.29□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Iqgap2Q3UQ44 1575 aa12.29□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Jmjd4Q8BFT6 427 aa12.29□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Rapgef2Q8CHG7 1496 aa12.29□□□□□ -0.44
Scn9a-201ENSMUST00000100063 SnrkQ8VDU5 748 aa12.29□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Pde4cQ3UEI1 686 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Ccdc172Q810N9 267 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Polr3dQ91WD1 398 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 AnlnQ8K298 1121 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms