RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Hspa1lP16627 641 aa13.23□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Tubgcp6G5E8P0 1769 aa13.22□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 TimelessQ9R1X4 1197 aa13.22□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 NalcnQ8BXR5 1738 aa13.22□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Eif5bQ05D44 1216 aaKnown RBP13.21□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 GsdmaQ9EST1 446 aa13.21□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Nlgn1Q99K10 843 aa13.21□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Iqsec2Q5DU25 1478 aa13.21□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Adgrl1Q80TR1 1466 aa13.21□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Gprasp1Q5U4C1 1347 aa13.21□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Ggt6Q6PDE7 497 aa13.2□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Tom1O88746 492 aa13.2□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Dzip1Q8BMD2 852 aa13.2□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 TatQ8QZR1 454 aa13.2□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 D430041D05RikF6ZGR6 1678 aa13.2□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Tnrc6bQ8BKI2 1810 aaKnown RBP13.2□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Gli3Q61602 1583 aa13.19□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Gimap6Q8K349 305 aa13.19□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Tmem132eQ6IEE6 982 aa13.19□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Kif24Q6NWW5 1356 aa13.18□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Nrxn1Q9CS84 1514 aa13.18□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Sipa1l2Q80TE4 1722 aa13.18□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Znf335A2A5K6 1337 aa13.18□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Ddx54Q8K4L0 874 aaKnown RBP13.18□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 P2rx7Q9Z1M0 595 aa13.18□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Slc12a5Q91V14 1138 aa13.17□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Astn2Q80Z10 1352 aa13.17□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 C5P06684 1680 aa13.17□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Gm21698A0A087WQP8 267 aa13.17□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Gm21671G3UY31 267 aa13.17□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Neurod2Q62414 383 aa13.17□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Smim5Q8BT42 78 aa13.17□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 CrbnQ8C7D2 445 aa13.17□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Golga2Q921M4 999 aa13.17□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Col18a1P39061 1774 aa13.16□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Apaf1O88879 1249 aa13.15□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 MpripP97434 1024 aa13.15□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Dnajc10Q9DC23 793 aa13.15□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Als2Q920R0 1651 aa13.15□□□□□ -0.3
Ccdc38-201ENSMUST00000092215 Qtrt2B8ZXI1 415 aa13.15□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Ccne1Q61457 408 aa13.15□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Ofd1Q80Z25 1017 aa13.15□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Mak16Q8BGS0 296 aaKnown RBP13.14□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 PalmQ9Z0P4 383 aa13.14□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Fmnl2A2APV2 1086 aa13.13□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Mapk8ip3Q9ESN9 1337 aa13.13□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 PaskQ8CEE6 1383 aa13.13□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Txnrd1Q9JMH6 613 aa13.12□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 FancaQ9JL70 1439 aa13.12□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Mcm10Q0VBD2 885 aa13.12□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Tex14Q7M6U3 1450 aa13.12□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 HdgfP51859 237 aaKnown RBP13.11□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Aplp2Q06335 707 aa13.11□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Kcnh5Q920E3 988 aa13.11□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Senp3Q9EP97 568 aaKnown RBP13.11□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 N4bp2F8VQG7 1678 aaKnown RBP13.11□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Ppp1r15aP17564 657 aa13.11□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Chd4Q6PDQ2 1915 aaKnown RBP13.11□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Unc13bQ9Z1N9 1602 aa13.1□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Slc5a4bQ91ZP4 660 aa13.1□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Speer4f1Q9D5Q6 258 aa13.1□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Hoxb7P09024 217 aa13.1□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Eif4a2P10630 407 aa13.1□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 KdrP35918 1367 aa13.1□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Ncoa4Q5U4H9 625 aa13.09□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Pak3Q61036 559 aa13.09□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Uhrf1bp1lA2RSJ4 1457 aa13.09□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Kiaa1107Q80TK0 1369 aa13.08□□□□□ -0.31
Ccdc38-201ENSMUST00000092215 Hoxc9P09633 260 aa13.08□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Trim28Q62318 834 aa13.08□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Rsph6aQ8CDR2 708 aa13.08□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Ncapd2Q8K2Z4 1392 aa13.08□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Cdk12Q14AX6 1484 aaKnown RBP13.08□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Cadps2Q8BYR5 1297 aa13.07□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.06□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Gm10471E9Q1C7 252 aa13.06□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Rangap1P46061 589 aaKnown RBP13.06□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Polr3glQ8R0C0 218 aa13.06□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Trim26Q99PN3 545 aa13.06□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 CemipQ8BI06 1361 aa13.05□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Stk31Q99MW1 1018 aa13.05□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Eya1P97767 591 aa13.05□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Zranb3Q6NZP1 1069 aa13.05□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Amotl2Q8K371 772 aa13.05□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Cabp2Q9JLK4 216 aa13.05□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Mon2Q80TL7 1715 aa13.04□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Nol11Q8BJW5 723 aaKnown RBP13.04□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Atf7ipQ7TT18 1306 aa13.04□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Rtl5Q5DTT4 599 aa13.03□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Ybx3Q9JKB3 361 aaKnown RBP13.03□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 TnikP83510 1323 aa13.03□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Irx6Q9ER75 438 aa13.03□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Pik3c2aQ61194 1686 aa13.02□□□□□ -0.32
Ccdc38-201ENSMUST00000092215 Zfp444Q3TDV8 331 aaKnown RBP13.02□□□□□ -0.33
Ccdc38-201ENSMUST00000092215 ZgpatQ8VDM1 511 aa13.02□□□□□ -0.33
Ccdc38-201ENSMUST00000092215 Ano8Q6PB70 1060 aa13.02□□□□□ -0.33
Ccdc38-201ENSMUST00000092215 Iqcf3Q9D498 203 aa13.02□□□□□ -0.33
Ccdc38-201ENSMUST00000092215 Dusp27Q148W8 1138 aa13.01□□□□□ -0.33
Ccdc38-201ENSMUST00000092215 OptnQ8K3K8 584 aa13.01□□□□□ -0.33
Ccdc38-201ENSMUST00000092215 Atxn3Q9CVD2 355 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms