RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Sox12Q04890 314 aa9.21□□□□□ -0.93
Clrn1-202ENSMUST00000055636 4930567H17RikQ3V0K5 233 aa9.21□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Gas2l2Q5SSG4 860 aa9.21□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Ak7Q9D2H2 614 aa9.21□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Arhgef28P97433 1693 aa9.21□□□□□ -0.93
Clrn1-202ENSMUST00000055636 NinlQ6ZQ12 1394 aa9.21□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Birc3O08863 600 aa9.21□□□□□ -0.94
Clrn1-202ENSMUST00000055636 U2af1Q9D883 239 aaKnown RBP9.21□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Trim30dE9PWL0 497 aa9.2□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Cald1E9QA15 768 aaKnown RBP9.2□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Rangap1P46061 589 aaKnown RBP9.2□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Tspyl2Q7TQI8 677 aa9.2□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Trim26Q99PN3 545 aa9.2□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Atxn3Q9CVD2 355 aa9.2□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Senp3Q9EP97 568 aaKnown RBP9.2□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Ift172Q6VH22 1749 aa9.2□□□□□ -0.94
Clrn1-202ENSMUST00000055636 MaddQ80U28 1577 aa9.2□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Adamtsl3G3UXC7 1706 aa9.19□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Polr3glQ8R0C0 218 aa9.19□□□□□ -0.94
Clrn1-202ENSMUST00000055636 GsdmaQ9EST1 446 aa9.19□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Usp19Q3UJD6 1360 aa9.19□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Tsen2Q6P7W5 460 aa9.19□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Plin1Q8CGN5 517 aa9.19□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Abca14E9Q8F8 1683 aa9.19□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Hsp90ab1P11499 724 aaKnown RBP9.18□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Ipo8Q7TMY7 1010 aa9.18□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Scaf11E9PZM7 1456 aaKnown RBP9.18□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Ppp1r9bQ6R891 817 aaKnown RBP9.18□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Gprasp1Q5U4C1 1347 aa9.18□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Mapk8ip3Q9ESN9 1337 aa9.18□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Ccdc183A2AJB1 534 aa9.18□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Ccdc30Q8BVF4 654 aa9.18□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Map3k19E9Q3S4 1311 aa9.17□□□□□ -0.94
Clrn1-202ENSMUST00000055636 IbtkQ6ZPR6 1352 aaKnown RBP9.17□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Atf7ipQ7TT18 1306 aa9.16□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Gm6268A2A3U9 297 aa9.16□□□□□ -0.94
Clrn1-202ENSMUST00000055636 Taok2Q6ZQ29 1240 aa9.15□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Pank1Q8K4K6 548 aa9.15□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Rlbp1Q9Z275 317 aa9.15□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Med14A2ABV5 1459 aaKnown RBP9.15□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Pdcl3Q8BVF2 240 aa9.14□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Tmc1Q8R4P5 757 aa9.14□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Uspl1Q3ULM6 1089 aa9.14□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Zc3h13E9Q784 1729 aaKnown RBP9.14□□□□□ -0.95
Clrn1-202ENSMUST00000055636 4930407I10RikD3Z5T8 1512 aa9.13□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Q3UJC8 639 aa9.13□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Slc12a5Q91V14 1138 aa9.13□□□□□ -0.95
Clrn1-202ENSMUST00000055636 FanciQ8K368 1330 aa9.13□□□□□ -0.95
Clrn1-202ENSMUST00000055636 PplQ9R269 1755 aa9.13□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Spryd3E9Q9B3 442 aa9.13□□□□□ -0.95
Clrn1-202ENSMUST00000055636 NktrP30415 1453 aa9.13□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Znf521Q6KAS7 1311 aa9.12□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Nrxn1Q9CS84 1514 aa9.12□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Adgrl1Q80TR1 1466 aa9.12□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Mcm10Q0VBD2 885 aa9.12□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Armcx1Q9CX83 456 aa9.11□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Chd2E9PZM4 1827 aaKnown RBP9.11□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Dip2aQ8BWT5 1523 aa9.11□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Duxf3A0A0N4SV92 674 aa9.11□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Znf692Q3U381 531 aa9.11□□□□□ -0.95
Clrn1-202ENSMUST00000055636 PalmQ9Z0P4 383 aa9.11□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Nwd1A6H603 1563 aa9.11□□□□□ -0.95
Clrn1-202ENSMUST00000055636 KarsQ99MN1 595 aaKnown RBP9.11□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Tmem94Q7TSH8 1360 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Sptbn5F6UCX4 1208 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Idi1P58044 227 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Dusp27Q148W8 1138 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Ksr2Q3UVC0 959 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Plekhg1F6S200 1446 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 AU015836B2RUM3 263 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Gm10563F6WIE4 79 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Pnmal2G3X9N3 661 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Htatsf1Q8BGC0 757 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Gtf2a1Q99PM3 378 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Antxr1Q9CZ52 562 aa9.1□□□□□ -0.95
Clrn1-202ENSMUST00000055636 PzpQ61838 1495 aa9.09□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Idi2Q8BFZ6 227 aa9.09□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Eif2ak4Q9QZ05 1648 aa9.09□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Tnpo1Q8BFY9 898 aaKnown RBP9.09□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Dnttip2Q8R2M2 758 aaKnown RBP9.09□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Dip2bQ3UH60 1574 aa9.09□□□□□ -0.95
Clrn1-202ENSMUST00000055636 Map4k4P97820 1233 aaKnown RBP9.08□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Pik3c2bE9QAN8 1632 aa9.08□□□□□ -0.96
Clrn1-202ENSMUST00000055636 GphnQ8BUV3 769 aaKnown RBP9.08□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Ralbp1Q62172 648 aa9.07□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Usp32F8VPZ3 1604 aa9.07□□□□□ -0.96
Clrn1-202ENSMUST00000055636 KdrP35918 1367 aa9.07□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Ppp2r3aB2RXC8 1150 aa9.07□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Nckap5lQ6GQX2 1323 aa9.07□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Uhrf1bp1lA2RSJ4 1457 aa9.06□□□□□ -0.96
Clrn1-202ENSMUST00000055636 MpripP97434 1024 aa9.06□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Trim58Q5NCC9 485 aa9.06□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Tbc1d32Q3URV1 1296 aa9.06□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Slc35g1Q8BY79 368 aa9.06□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Znf330Q922H9 316 aa9.05□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Slit3Q9WVB4 1523 aa9.05□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Cabp4Q8VHC5 271 aa9.05□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Ppp1r3fQ9JIG4 799 aa9.05□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Cabp2Q9JLK4 216 aa9.05□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Gm21190A0A0G2JGJ6 266 aa9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 53.1 ms