RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Rhot2Q8JZN7 620 aa13.75□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 PrkcshO08795 521 aa13.75□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Tpm2P58774 284 aa13.75□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Ak7Q9D2H2 614 aa13.75□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Abcc1O35379 1528 aa13.75□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Rbm5Q91YE7 815 aaKnown RBP13.75□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Eif2s2Q99L45 331 aaKnown RBP13.75□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Odf2A3KGV1 830 aaKnown RBP13.74□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Jmjd4Q8BFT6 427 aa13.74□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Gpatch8A2A6A1 1505 aa13.74□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Ubap1lG3UW59 384 aa13.74□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Kri1Q8VDQ9 704 aaKnown RBP13.74□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Farp2Q91VS8 1065 aa13.74□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Dhx9O70133 1380 aaKnown RBP13.73□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Pbrm1Q8BSQ9 1634 aaKnown RBP13.73□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Gpatch11Q3UFS4 262 aa13.73□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 CrebrfQ8CDG5 640 aaKnown RBP13.73□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Tpm4Q6IRU2 248 aa13.72□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Psma5Q9Z2U1 241 aaKnown RBP13.72□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Gm1043A0A140LJC2 1431 aa13.72□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Triml2E9PW10 424 aa13.72□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Gm10563F6WIE4 79 aa13.72□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Mphosph10Q810V0 681 aaKnown RBP13.72□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Nap1l3Q794H2 544 aa13.72□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Trim29Q8R2Q0 587 aa13.72□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Prkrip1Q9CWV6 186 aaKnown RBP13.72□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Mapk8ip1Q9WVI9 707 aa13.71□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Hook1Q8BIL5 728 aa13.71□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Nup160Q9Z0W3 1402 aaKnown RBP13.71□□□□□ -0.21
Pcdhb17-201ENSMUST00000053856 Kcnn1Q9EQR3 537 aa13.71□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Shroom2A2ALU4 1481 aa13.7□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Zkscan2G3X952 960 aa13.7□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Senp3Q9EP97 568 aaKnown RBP13.7□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Kdm5bQ80Y84 1544 aa13.7□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Gnai2P08752 355 aaKnown RBP13.7□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Vps53Q8CCB4 832 aa13.7□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Rpgrip1lQ8CG73 1264 aa13.7□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 ApobrQ8VBT6 942 aa13.7□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Casq1O09165 405 aa13.69□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Neurod6P48986 337 aa13.69□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 CastP51125 788 aa13.69□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Ehmt1Q5DW34 1296 aa13.69□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Pknox2Q8BG99 474 aa13.69□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Mum1Q6DID5 682 aa13.69□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Gcc1Q9D4H2 778 aa13.69□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Ipo7Q9EPL8 1038 aaKnown RBP13.69□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Rfx1P48377 963 aa13.68□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Tpm1P58771 284 aa13.68□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Cep131Q62036 1060 aa13.68□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Sf3a1Q8K4Z5 791 aaKnown RBP13.68□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Znf287Q9EQB9 759 aa13.68□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Rabep1O35551 862 aa13.68□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Rad17Q6NXW6 688 aa13.68□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 ScaperF8VQ70 1398 aaKnown RBP13.68□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Eif4g1Q6NZJ6 1600 aaKnown RBP13.68□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Cplx1P63040 134 aa13.67□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Nlrp3Q8R4B8 1033 aa13.67□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Odf2lQ9D478 642 aa13.67□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 MpripP97434 1024 aa13.67□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 TnnQ80Z71 1560 aa13.67□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Talpid3E9PV87 1520 aa13.67□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Gsdma2Q32M21 443 aa13.66□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Krt82Q99M74 516 aa13.66□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Chmp4cQ9D7F7 232 aa13.66□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 NgdnQ9DB96 315 aaKnown RBP13.66□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Ccp110Q7TSH4 1004 aa13.66□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Riok1Q922Q2 567 aa13.66□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Pde4bB1AWC9 736 aa13.66□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 TmpoQ61033 693 aaKnown RBP13.66□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Samd9lQ69Z37 1561 aa13.66□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Ttll13A4Q9F6 804 aa13.65□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Map4k4P97820 1233 aaKnown RBP13.65□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Klc3Q91W40 508 aa13.65□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Pla2r1Q62028 1487 aa13.65□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Smc2Q8CG48 1191 aaKnown RBP13.65□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Cyp46a1Q9WVK8 500 aa13.65□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Washc2Q6PGL7 1334 aa13.65□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Exoc5Q3TPX4 708 aa13.65□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Ppp4r3bQ922R5 820 aa13.65□□□□□ -0.22
Pcdhb17-201ENSMUST00000053856 Map7d2A2AG50 781 aa13.64□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Tpm3P21107 285 aaKnown RBP13.64□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Thoc2B1AZI6 1594 aaKnown RBP13.64□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Fbxo2Q80UW2 297 aa13.64□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Naip6Q9JIB6 1403 aa13.64□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Rbm26Q6NZN0 1012 aaKnown RBP13.64□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Pdcl3Q8BVF2 240 aa13.64□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Znf692Q3U381 531 aa13.64□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Rbm27Q5SFM8 1060 aaKnown RBP13.64□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Ripk4Q9ERK0 786 aa13.64□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Ankrd26Q811D2 1581 aa13.64□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Mctp2Q5RJH2 878 aa13.63□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Btbd11Q6GQW0 1109 aa13.63□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Ppip5k1A2ARP1 1436 aa13.63□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 BcanQ61361 883 aa13.63□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 PtprgQ05909 1442 aa13.63□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 SkilQ60665 675 aa13.63□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 NpatQ8BMA5 1420 aa13.63□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Rusc2Q80U22 1514 aa13.62□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Ccdc183A2AJB1 534 aa13.62□□□□□ -0.23
Pcdhb17-201ENSMUST00000053856 Nphp1Q9QY53 687 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms