RNA–Protein interactions for RNA: ENSMUST00000048635.12

Shf-201, Transcript of SH2 domain-containing adapter protein F, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shf, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shf-201ENSMUST00000048635 Atp7bQ64446 1462 aa35.84■■■■□ 3.33
Shf-201ENSMUST00000048635 Marf1Q8BJ34 1730 aaKnown RBP35.84■■■■□ 3.33
Shf-201ENSMUST00000048635 Prdm10Q3UTQ7 1184 aa35.83■■■■□ 3.33
Shf-201ENSMUST00000048635 CemipQ8BI06 1361 aa35.83■■■■□ 3.33
Shf-201ENSMUST00000048635 Cdk12Q14AX6 1484 aaKnown RBP35.82■■■■□ 3.33
Shf-201ENSMUST00000048635 Hoxb7P09024 217 aa35.79■■■■□ 3.32
Shf-201ENSMUST00000048635 Slc35g1Q8BY79 368 aa35.79■■■■□ 3.32
Shf-201ENSMUST00000048635 Zfp142G5E869 1843 aa35.79■■■■□ 3.32
Shf-201ENSMUST00000048635 Rab3gap2Q8BMG7 1366 aa35.78■■■■□ 3.32
Shf-201ENSMUST00000048635 Ncoa4Q5U4H9 625 aa35.77■■■■□ 3.32
Shf-201ENSMUST00000048635 Atp10bB1AWN4 1474 aa35.77■■■■□ 3.32
Shf-201ENSMUST00000048635 Ubr1O70481 1757 aa35.77■■■■□ 3.32
Shf-201ENSMUST00000048635 Scn7aB1AYL1 1681 aa35.76■■■■□ 3.31
Shf-201ENSMUST00000048635 Zmym3Q9JLM4 1370 aa35.74■■■■□ 3.31
Shf-201ENSMUST00000048635 Dennd6aQ8BH65 605 aa35.72■■■■□ 3.31
Shf-201ENSMUST00000048635 Cadps2Q8BYR5 1297 aa35.71■■■■□ 3.31
Shf-201ENSMUST00000048635 Ncapd2Q8K2Z4 1392 aa35.71■■■■□ 3.31
Shf-201ENSMUST00000048635 Abca15E9PWH4 1668 aa35.71■■■■□ 3.31
Shf-201ENSMUST00000048635 Cald1E9QA15 768 aaKnown RBP35.7■■■■□ 3.31
Shf-201ENSMUST00000048635 Ddx17Q501J6 650 aaKnown RBP35.7■■■■□ 3.31
Shf-201ENSMUST00000048635 Map2P20357 1828 aa35.69■■■■□ 3.3
Shf-201ENSMUST00000048635 Ppp2r1aQ76MZ3 589 aa35.69■■■■□ 3.3
Shf-201ENSMUST00000048635 Siglec1Q62230 1695 aa35.69■■■■□ 3.3
Shf-201ENSMUST00000048635 Tet3Q8BG87 1668 aa35.67■■■■□ 3.3
Shf-201ENSMUST00000048635 Dixdc1Q80Y83 711 aa35.67■■■■□ 3.3
Shf-201ENSMUST00000048635 Gm21190A0A0G2JGJ6 266 aa35.66■■■■□ 3.3
Shf-201ENSMUST00000048635 Nlgn1Q99K10 843 aa35.66■■■■□ 3.3
Shf-201ENSMUST00000048635 Tex14Q7M6U3 1450 aa35.65■■■■□ 3.3
Shf-201ENSMUST00000048635 Fam135bQ9DAI6 1403 aa35.64■■■■□ 3.3
Shf-201ENSMUST00000048635 Bcl9lQ67FY2 1494 aa35.63■■■■□ 3.29
Shf-201ENSMUST00000048635 Kcnh5Q920E3 988 aa35.63■■■■□ 3.29
Shf-201ENSMUST00000048635 Ano8Q6PB70 1060 aa35.62■■■■□ 3.29
Shf-201ENSMUST00000048635 Exoc6Q8R313 802 aa35.61■■■■□ 3.29
Shf-201ENSMUST00000048635 Rad17Q6NXW6 688 aa35.6■■■■□ 3.29
Shf-201ENSMUST00000048635 Ybx3Q9JKB3 361 aaKnown RBP35.6■■■■□ 3.29
Shf-201ENSMUST00000048635 Wwc2Q6NXJ0 1187 aa35.58■■■■□ 3.29
Shf-201ENSMUST00000048635 Birc3O08863 600 aa35.57■■■■□ 3.29
Shf-201ENSMUST00000048635 Cabp4Q8VHC5 271 aa35.57■■■■□ 3.29
Shf-201ENSMUST00000048635 ZgpatQ8VDM1 511 aa35.57■■■■□ 3.28
Shf-201ENSMUST00000048635 Qtrt2B8ZXI1 415 aa35.56■■■■□ 3.28
Shf-201ENSMUST00000048635 Dzip1Q8BMD2 852 aa35.56■■■■□ 3.28
Shf-201ENSMUST00000048635 PaskQ8CEE6 1383 aa35.54■■■■□ 3.28
Shf-201ENSMUST00000048635 HdgfP51859 237 aaKnown RBP35.54■■■■□ 3.28
Shf-201ENSMUST00000048635 Slc5a4bQ91ZP4 660 aa35.54■■■■□ 3.28
Shf-201ENSMUST00000048635 Nlrp6Q91WS2 869 aa35.53■■■■□ 3.28
Shf-201ENSMUST00000048635 Nfat5Q9WV30 1534 aa35.53■■■■□ 3.28
Shf-201ENSMUST00000048635 Pcgf6Q99NA9 353 aa35.52■■■■□ 3.28
Shf-201ENSMUST00000048635 Fbxo41Q6NS60 873 aa35.51■■■■□ 3.28
Shf-201ENSMUST00000048635 Robo1O89026 1612 aa35.49■■■■□ 3.27
Shf-201ENSMUST00000048635 Nid2O88322 1403 aa35.49■■■■□ 3.27
Shf-201ENSMUST00000048635 FancaQ9JL70 1439 aa35.49■■■■□ 3.27
Shf-201ENSMUST00000048635 PnisrA2AJT4 805 aaKnown RBP35.48■■■■□ 3.27
Shf-201ENSMUST00000048635 Trim28Q62318 834 aa35.48■■■■□ 3.27
Shf-201ENSMUST00000048635 Rpgrip1lQ8CG73 1264 aa35.48■■■■□ 3.27
Shf-201ENSMUST00000048635 Fmnl2A2APV2 1086 aa35.47■■■■□ 3.27
Shf-201ENSMUST00000048635 Atf7ipQ7TT18 1306 aa35.46■■■■□ 3.27
Shf-201ENSMUST00000048635 Mrs2Q5NCE8 434 aa35.46■■■■□ 3.27
Shf-201ENSMUST00000048635 TatQ8QZR1 454 aa35.44■■■■□ 3.26
Shf-201ENSMUST00000048635 PtprvP70289 1705 aa35.43■■■■□ 3.26
Shf-201ENSMUST00000048635 Ppp1r15aP17564 657 aa35.43■■■■□ 3.26
Shf-201ENSMUST00000048635 Nckap5lQ6GQX2 1323 aa35.42■■■■□ 3.26
Shf-201ENSMUST00000048635 Zfp777B9EKF4 885 aa35.41■■■■□ 3.26
Shf-201ENSMUST00000048635 Znf526Q8BI66 675 aa35.41■■■■□ 3.26
Shf-201ENSMUST00000048635 TnrQ8BYI9 1358 aa35.41■■■■□ 3.26
Shf-201ENSMUST00000048635 Zscan21Q07231 555 aa35.38■■■■□ 3.25
Shf-201ENSMUST00000048635 Q7TT23 1179 aa35.38■■■■□ 3.25
Shf-201ENSMUST00000048635 NrdcQ8BHG1 1161 aa35.37■■■■□ 3.25
Shf-201ENSMUST00000048635 Cdhr2E9Q7P9 1308 aa35.36■■■■□ 3.25
Shf-201ENSMUST00000048635 Gm21698A0A087WQP8 267 aa35.36■■■■□ 3.25
Shf-201ENSMUST00000048635 Gm21671G3UY31 267 aa35.36■■■■□ 3.25
Shf-201ENSMUST00000048635 Card10P58660 1021 aa35.36■■■■□ 3.25
Shf-201ENSMUST00000048635 Lrrc59Q922Q8 307 aaKnown RBP35.36■■■■□ 3.25
Shf-201ENSMUST00000048635 Bcl2l12Q9D3J3 255 aa35.35■■■■□ 3.25
Shf-201ENSMUST00000048635 Arhgef1Q61210 920 aaKnown RBP35.34■■■■□ 3.25
Shf-201ENSMUST00000048635 Dnajc10Q9DC23 793 aa35.33■■■■□ 3.25
Shf-201ENSMUST00000048635 GsdmaQ9EST1 446 aa35.32■■■■□ 3.25
Shf-201ENSMUST00000048635 Hoxc9P09633 260 aa35.31■■■■□ 3.24
Shf-201ENSMUST00000048635 P2rx7Q9Z1M0 595 aa35.3■■■■□ 3.24
Shf-201ENSMUST00000048635 Ptpn23Q6PB44 1692 aa35.29■■■■□ 3.24
Shf-201ENSMUST00000048635 Uhrf1bp1lA2RSJ4 1457 aa35.29■■■■□ 3.24
Shf-201ENSMUST00000048635 Acsbg1Q99PU5 721 aa35.29■■■■□ 3.24
Shf-201ENSMUST00000048635 Nol11Q8BJW5 723 aaKnown RBP35.28■■■■□ 3.24
Shf-201ENSMUST00000048635 Parp14Q2EMV9 1817 aa35.27■■■■□ 3.24
Shf-201ENSMUST00000048635 Slit2Q9R1B9 1521 aa35.27■■■■□ 3.24
Shf-201ENSMUST00000048635 Amotl2Q8K371 772 aa35.26■■■■□ 3.24
Shf-201ENSMUST00000048635 Spef2Q8C9J3 1734 aa35.25■■■■□ 3.23
Shf-201ENSMUST00000048635 Rsph6aQ8CDR2 708 aa35.24■■■■□ 3.23
Shf-201ENSMUST00000048635 Tsen2Q6P7W5 460 aa35.23■■■■□ 3.23
Shf-201ENSMUST00000048635 Slc4a2P13808 1237 aaKnown RBP35.23■■■■□ 3.23
Shf-201ENSMUST00000048635 Slc12a5Q91V14 1138 aa35.23■■■■□ 3.23
Shf-201ENSMUST00000048635 Kiaa1107Q80TK0 1369 aa35.22■■■■□ 3.23
Shf-201ENSMUST00000048635 Ggt6Q6PDE7 497 aa35.22■■■■□ 3.23
Shf-201ENSMUST00000048635 Smim5Q8BT42 78 aa35.22■■■■□ 3.23
Shf-201ENSMUST00000048635 Slx1bQ8BX32 270 aa35.22■■■■□ 3.23
Shf-201ENSMUST00000048635 Ddx54Q8K4L0 874 aaKnown RBP35.21■■■■□ 3.23
Shf-201ENSMUST00000048635 Txnrd1Q9JMH6 613 aa35.2■■■■□ 3.23
Shf-201ENSMUST00000048635 Eif4a2P10630 407 aa35.19■■■■□ 3.22
Shf-201ENSMUST00000048635 Rtl5Q5DTT4 599 aa35.19■■■■□ 3.22
Shf-201ENSMUST00000048635 Nhsl1Q8CAF4 1587 aa35.17■■■■□ 3.22
Shf-201ENSMUST00000048635 Ecm2Q5FW85 670 aa35.16■■■■□ 3.22
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms