RNA–Protein interactions for RNA: ENSMUST00000048635.12

Shf-201, Transcript of SH2 domain-containing adapter protein F, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shf, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shf-201ENSMUST00000048635 Gm35339A0A140LHH9 1649 aa57.95■■■■■ 6.87
Shf-201ENSMUST00000048635 NischQ80TM9 1593 aa57.45■■■■■ 6.79
Shf-201ENSMUST00000048635 Abcc9P70170 1546 aa55.72■■■■■ 6.51
Shf-201ENSMUST00000048635 Abcc8B2RUS7 1588 aa55.25■■■■■ 6.44
Shf-201ENSMUST00000048635 ScribQ80U72 1612 aa52.69■■■■■ 6.03
Shf-201ENSMUST00000048635 Dcaf1Q80TR8 1506 aa51.32■■■■■ 5.81
Shf-201ENSMUST00000048635 NacadQ5SWP3 1504 aa51.26■■■■■ 5.8
Shf-201ENSMUST00000048635 Kdm5dQ62240 1548 aa51.19■■■■■ 5.79
Shf-201ENSMUST00000048635 Rhox8Q6VSS7 320 aa50.35■■■■■ 5.65
Shf-201ENSMUST00000048635 Sycp2Q9CUU3 1500 aa50.16■■■■■ 5.62
Shf-201ENSMUST00000048635 Rb1cc1Q9ESK9 1588 aa50.16■■■■■ 5.62
Shf-201ENSMUST00000048635 Ccdc180J3QNE4 1664 aa49.94■■■■■ 5.59
Shf-201ENSMUST00000048635 Baz1aO88379 1555 aa49.56■■■■■ 5.52
Shf-201ENSMUST00000048635 Crybg2B7ZCC2 1516 aa49.36■■■■■ 5.49
Shf-201ENSMUST00000048635 BicraF8VPZ9 1578 aa49.25■■■■■ 5.48
Shf-201ENSMUST00000048635 Zcchc6Q5BLK4 1491 aaKnown RBP48.52■■■■■ 5.36
Shf-201ENSMUST00000048635 Rtl1Q7M732 1744 aa48.46■■■■■ 5.35
Shf-201ENSMUST00000048635 Smarca2Q6DIC0 1577 aa48.2■■■■■ 5.31
Shf-201ENSMUST00000048635 Pds5bQ4VA53 1446 aaKnown RBP47.81■■■■■ 5.24
Shf-201ENSMUST00000048635 Atad2bE9Q166 1460 aaKnown RBP47.53■■■■■ 5.2
Shf-201ENSMUST00000048635 Smarca4Q3TKT4 1613 aaKnown RBP47.51■■■■■ 5.2
Shf-201ENSMUST00000048635 Cecr2E9Q2Z1 1453 aa47.45■■■■■ 5.19
Shf-201ENSMUST00000048635 Iqgap2Q3UQ44 1575 aa47.09■■■■■ 5.13
Shf-201ENSMUST00000048635 Thoc2B1AZI6 1594 aaKnown RBP47.02■■■■■ 5.12
Shf-201ENSMUST00000048635 Brd4Q9ESU6 1400 aaKnown RBP46.92■■■■■ 5.1
Shf-201ENSMUST00000048635 Ccdc136Q3TVA9 1136 aa46.9■■■■■ 5.1
Shf-201ENSMUST00000048635 Ercc6F8VPZ5 1481 aa46.82■■■■■ 5.09
Shf-201ENSMUST00000048635 Cttnbp2B9EJA2 1648 aa46.74■■■■■ 5.07
Shf-201ENSMUST00000048635 CftrP26361 1476 aa46.68■■■■■ 5.06
Shf-201ENSMUST00000048635 Synj1Q8CHC4 1574 aa46.65■■■■■ 5.06
Shf-201ENSMUST00000048635 Wdr62Q3U3T8 1523 aa46.55■■■■■ 5.04
Shf-201ENSMUST00000048635 Trim41Q5NCC3 630 aa46.51■■■■■ 5.04
Shf-201ENSMUST00000048635 Frmpd1A2AKB4 1549 aa46.42■■■■■ 5.02
Shf-201ENSMUST00000048635 Cc2d2aQ8CFW7 1633 aa46.26■■■■■ 5
Shf-201ENSMUST00000048635 Dnajc5bQ9CQ94 199 aa46.22■■■■■ 4.99
Shf-201ENSMUST00000048635 Fam135aQ6NS59 1506 aa46.18■■■■■ 4.98
Shf-201ENSMUST00000048635 Phldb1Q6PDH0 1371 aaKnown RBP46.01■■■■■ 4.96
Shf-201ENSMUST00000048635 Baz1bQ9Z277 1479 aa45.93■■■■■ 4.94
Shf-201ENSMUST00000048635 Unc13aQ4KUS2 1712 aa45.92■■■■■ 4.94
Shf-201ENSMUST00000048635 Esf1Q3V1V3 845 aaKnown RBP45.85■■■■■ 4.93
Shf-201ENSMUST00000048635 Golga3P55937 1487 aa45.54■■■■■ 4.88
Shf-201ENSMUST00000048635 Top2bQ64511 1612 aa45.44■■■■■ 4.86
Shf-201ENSMUST00000048635 Ubl4bQ9CQ84 188 aa45.43■■■■■ 4.86
Shf-201ENSMUST00000048635 Rsf1E9PWW9 1441 aaKnown RBP45.3■■■■■ 4.84
Shf-201ENSMUST00000048635 Lamc3Q9R0B6 1581 aa45.19■■■■■ 4.82
Shf-201ENSMUST00000048635 Cngb1E1AZ71 1325 aa45.16■■■■■ 4.82
Shf-201ENSMUST00000048635 Mrc2Q64449 1479 aa45.07■■■■■ 4.81
Shf-201ENSMUST00000048635 Kif15Q6P9L6 1387 aa45.04■■■■■ 4.8
Shf-201ENSMUST00000048635 TnnQ80Z71 1560 aa44.97■■■■■ 4.79
Shf-201ENSMUST00000048635 Fmn1Q05860 1466 aa44.9■■■■■ 4.78
Shf-201ENSMUST00000048635 Cux2P70298 1426 aa44.82■■■■■ 4.76
Shf-201ENSMUST00000048635 Ccdc18Q640L5 1455 aa44.54■■■■■ 4.72
Shf-201ENSMUST00000048635 HrcG5E8J6 738 aa44.49■■■■■ 4.71
Shf-201ENSMUST00000048635 Camsap1A2AHC3 1581 aa44.44■■■■■ 4.71
Shf-201ENSMUST00000048635 Npm1Q61937 292 aaKnown RBP44.43■■■■■ 4.7
Shf-201ENSMUST00000048635 Cep164Q5DU05 1446 aa44.43■■■■■ 4.7
Shf-201ENSMUST00000048635 Ccdc88bQ4QRL3 1481 aa44.39■■■■■ 4.7
Shf-201ENSMUST00000048635 Kif21aQ9QXL2 1672 aa44.31■■■■■ 4.68
Shf-201ENSMUST00000048635 Top2aQ01320 1528 aaKnown RBP44.2■■■■■ 4.67
Shf-201ENSMUST00000048635 Chic1Q8CBW7 227 aa44.11■■■■■ 4.65
Shf-201ENSMUST00000048635 Il27Q8K3I6 234 aa44.1■■■■■ 4.65
Shf-201ENSMUST00000048635 LrpprcQ6PB66 1392 aaKnown RBP44.08■■■■■ 4.65
Shf-201ENSMUST00000048635 Lrriq1Q0P5X1 1673 aa44.02■■■■■ 4.64
Shf-201ENSMUST00000048635 Dhx29Q6PGC1 1365 aaKnown RBP43.94■■■■■ 4.62
Shf-201ENSMUST00000048635 Grin2bQ01097 1482 aa43.91■■■■■ 4.62
Shf-201ENSMUST00000048635 PogzQ8BZH4 1409 aaKnown RBP43.89■■■■■ 4.62
Shf-201ENSMUST00000048635 Crocc2F6XLV1 1638 aa43.86■■■■■ 4.61
Shf-201ENSMUST00000048635 NrkQ9R0G8 1455 aa43.74■■■■■ 4.59
Shf-201ENSMUST00000048635 Duox2A2AQ99 1517 aa43.7■■■■■ 4.59
Shf-201ENSMUST00000048635 Efcab5A0JP43 1406 aa43.65■■■■■ 4.58
Shf-201ENSMUST00000048635 Urb2E9Q7L1 1524 aaKnown RBP43.61■■■■■ 4.57
Shf-201ENSMUST00000048635 Plb1Q3TTY0 1478 aa43.57■■■■■ 4.57
Shf-201ENSMUST00000048635 Shroom4Q1W617 1475 aa43.52■■■■■ 4.56
Shf-201ENSMUST00000048635 Eif4g3Q80XI3 1579 aaKnown RBP43.46■■■■■ 4.55
Shf-201ENSMUST00000048635 Ift140E9PY46 1464 aa43.41■■■■■ 4.54
Shf-201ENSMUST00000048635 Samd9lQ69Z37 1561 aa43.35■■■■■ 4.53
Shf-201ENSMUST00000048635 PtprkP35822 1457 aa43.32■■■■■ 4.53
Shf-201ENSMUST00000048635 Pbrm1Q8BSQ9 1634 aaKnown RBP43.24■■■■■ 4.51
Shf-201ENSMUST00000048635 Rapgef2Q8CHG7 1496 aa43.2■■■■■ 4.51
Shf-201ENSMUST00000048635 Gab3Q8BSM5 595 aa43.15■■■■■ 4.5
Shf-201ENSMUST00000048635 Disp1Q3TDN0 1521 aa43.13■■■■■ 4.49
Shf-201ENSMUST00000048635 Npm2Q80W85 207 aa43.12■■■■■ 4.49
Shf-201ENSMUST00000048635 SynmQ70IV5 1561 aa43.05■■■■■ 4.48
Shf-201ENSMUST00000048635 Rusc2Q80U22 1514 aa43.02■■■■■ 4.48
Shf-201ENSMUST00000048635 Setd1bQ8CFT2 1985 aa43.02■■■■■ 4.48
Shf-201ENSMUST00000048635 Mroh2bQ7M6Y6 1581 aa42.98■■■■■ 4.47
Shf-201ENSMUST00000048635 Nup160Q9Z0W3 1402 aaKnown RBP42.97■■■■■ 4.47
Shf-201ENSMUST00000048635 Rad54l2Q99NG0 1466 aa42.96■■■■■ 4.47
Shf-201ENSMUST00000048635 Map3k1P53349 1493 aa42.92■■■■■ 4.46
Shf-201ENSMUST00000048635 Cc2d2bA0A286YDU8 1405 aa42.91■■■■■ 4.46
Shf-201ENSMUST00000048635 Gpatch8A2A6A1 1505 aa42.91■■■■■ 4.46
Shf-201ENSMUST00000048635 Eif4g1Q6NZJ6 1600 aaKnown RBP42.91■■■■■ 4.46
Shf-201ENSMUST00000048635 Grin2aP35436 1464 aa42.9■■■■■ 4.46
Shf-201ENSMUST00000048635 Magi3Q9EQJ9 1476 aa42.9■■■■■ 4.46
Shf-201ENSMUST00000048635 Zeb1Q64318 1117 aa42.88■■■■■ 4.45
Shf-201ENSMUST00000048635 Cep162Q6ZQ06 1403 aa42.86■■■■■ 4.45
Shf-201ENSMUST00000048635 Arhgap35Q91YM2 1499 aa42.82■■■■■ 4.45
Shf-201ENSMUST00000048635 Pla2r1Q62028 1487 aa42.75■■■■■ 4.43
Shf-201ENSMUST00000048635 AqrQ8CFQ3 1481 aaKnown RBP42.73■■■■■ 4.43
Shf-201ENSMUST00000048635 Carmil1Q6EDY6 1374 aa42.64■■■■■ 4.42
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms