RNA–Protein interactions for RNA: ENSMUST00000048635.12

Shf-201, Transcript of SH2 domain-containing adapter protein F, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shf, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shf-201ENSMUST00000048635 Gm35339A0A140LHH9 1649 aa57,95■■■■■ 6,87
Shf-201ENSMUST00000048635 NischQ80TM9 1593 aa57,45■■■■■ 6,79
Shf-201ENSMUST00000048635 Abcc9P70170 1546 aa55,72■■■■■ 6,51
Shf-201ENSMUST00000048635 Abcc8B2RUS7 1588 aa55,25■■■■■ 6,44
Shf-201ENSMUST00000048635 ScribQ80U72 1612 aa52,69■■■■■ 6,03
Shf-201ENSMUST00000048635 Dcaf1Q80TR8 1506 aa51,32■■■■■ 5,81
Shf-201ENSMUST00000048635 NacadQ5SWP3 1504 aa51,26■■■■■ 5,8
Shf-201ENSMUST00000048635 Kdm5dQ62240 1548 aa51,19■■■■■ 5,79
Shf-201ENSMUST00000048635 Rhox8Q6VSS7 320 aa50,35■■■■■ 5,65
Shf-201ENSMUST00000048635 Sycp2Q9CUU3 1500 aa50,16■■■■■ 5,62
Shf-201ENSMUST00000048635 Rb1cc1Q9ESK9 1588 aa50,16■■■■■ 5,62
Shf-201ENSMUST00000048635 Ccdc180J3QNE4 1664 aa49,94■■■■■ 5,59
Shf-201ENSMUST00000048635 Baz1aO88379 1555 aa49,56■■■■■ 5,52
Shf-201ENSMUST00000048635 Crybg2B7ZCC2 1516 aa49,36■■■■■ 5,49
Shf-201ENSMUST00000048635 BicraF8VPZ9 1578 aa49,25■■■■■ 5,48
Shf-201ENSMUST00000048635 Zcchc6Q5BLK4 1491 aaKnown RBP48,52■■■■■ 5,36
Shf-201ENSMUST00000048635 Rtl1Q7M732 1744 aa48,46■■■■■ 5,35
Shf-201ENSMUST00000048635 Smarca2Q6DIC0 1577 aa48,2■■■■■ 5,31
Shf-201ENSMUST00000048635 Pds5bQ4VA53 1446 aaKnown RBP47,81■■■■■ 5,24
Shf-201ENSMUST00000048635 Atad2bE9Q166 1460 aaKnown RBP47,53■■■■■ 5,2
Shf-201ENSMUST00000048635 Smarca4Q3TKT4 1613 aaKnown RBP47,51■■■■■ 5,2
Shf-201ENSMUST00000048635 Cecr2E9Q2Z1 1453 aa47,45■■■■■ 5,19
Shf-201ENSMUST00000048635 Iqgap2Q3UQ44 1575 aa47,09■■■■■ 5,13
Shf-201ENSMUST00000048635 Thoc2B1AZI6 1594 aaKnown RBP47,02■■■■■ 5,12
Shf-201ENSMUST00000048635 Brd4Q9ESU6 1400 aaKnown RBP46,92■■■■■ 5,1
Shf-201ENSMUST00000048635 Ccdc136Q3TVA9 1136 aa46,9■■■■■ 5,1
Shf-201ENSMUST00000048635 Ercc6F8VPZ5 1481 aa46,82■■■■■ 5,09
Shf-201ENSMUST00000048635 Cttnbp2B9EJA2 1648 aa46,74■■■■■ 5,07
Shf-201ENSMUST00000048635 CftrP26361 1476 aa46,68■■■■■ 5,06
Shf-201ENSMUST00000048635 Synj1Q8CHC4 1574 aa46,65■■■■■ 5,06
Shf-201ENSMUST00000048635 Wdr62Q3U3T8 1523 aa46,55■■■■■ 5,04
Shf-201ENSMUST00000048635 Trim41Q5NCC3 630 aa46,51■■■■■ 5,04
Shf-201ENSMUST00000048635 Frmpd1A2AKB4 1549 aa46,42■■■■■ 5,02
Shf-201ENSMUST00000048635 Cc2d2aQ8CFW7 1633 aa46,26■■■■■ 5
Shf-201ENSMUST00000048635 Dnajc5bQ9CQ94 199 aa46,22■■■■■ 4,99
Shf-201ENSMUST00000048635 Fam135aQ6NS59 1506 aa46,18■■■■■ 4,98
Shf-201ENSMUST00000048635 Phldb1Q6PDH0 1371 aaKnown RBP46,01■■■■■ 4,96
Shf-201ENSMUST00000048635 Baz1bQ9Z277 1479 aa45,93■■■■■ 4,94
Shf-201ENSMUST00000048635 Unc13aQ4KUS2 1712 aa45,92■■■■■ 4,94
Shf-201ENSMUST00000048635 Esf1Q3V1V3 845 aaKnown RBP45,85■■■■■ 4,93
Shf-201ENSMUST00000048635 Golga3P55937 1487 aa45,54■■■■■ 4,88
Shf-201ENSMUST00000048635 Top2bQ64511 1612 aa45,44■■■■■ 4,86
Shf-201ENSMUST00000048635 Ubl4bQ9CQ84 188 aa45,43■■■■■ 4,86
Shf-201ENSMUST00000048635 Rsf1E9PWW9 1441 aaKnown RBP45,3■■■■■ 4,84
Shf-201ENSMUST00000048635 Lamc3Q9R0B6 1581 aa45,19■■■■■ 4,82
Shf-201ENSMUST00000048635 Cngb1E1AZ71 1325 aa45,16■■■■■ 4,82
Shf-201ENSMUST00000048635 Mrc2Q64449 1479 aa45,07■■■■■ 4,81
Shf-201ENSMUST00000048635 Kif15Q6P9L6 1387 aa45,04■■■■■ 4,8
Shf-201ENSMUST00000048635 TnnQ80Z71 1560 aa44,97■■■■■ 4,79
Shf-201ENSMUST00000048635 Fmn1Q05860 1466 aa44,9■■■■■ 4,78
Shf-201ENSMUST00000048635 Cux2P70298 1426 aa44,82■■■■■ 4,76
Shf-201ENSMUST00000048635 Ccdc18Q640L5 1455 aa44,54■■■■■ 4,72
Shf-201ENSMUST00000048635 HrcG5E8J6 738 aa44,49■■■■■ 4,71
Shf-201ENSMUST00000048635 Camsap1A2AHC3 1581 aa44,44■■■■■ 4,71
Shf-201ENSMUST00000048635 Npm1Q61937 292 aaKnown RBP44,43■■■■■ 4,7
Shf-201ENSMUST00000048635 Cep164Q5DU05 1446 aa44,43■■■■■ 4,7
Shf-201ENSMUST00000048635 Ccdc88bQ4QRL3 1481 aa44,39■■■■■ 4,7
Shf-201ENSMUST00000048635 Kif21aQ9QXL2 1672 aa44,31■■■■■ 4,68
Shf-201ENSMUST00000048635 Top2aQ01320 1528 aaKnown RBP44,2■■■■■ 4,67
Shf-201ENSMUST00000048635 Chic1Q8CBW7 227 aa44,11■■■■■ 4,65
Shf-201ENSMUST00000048635 Il27Q8K3I6 234 aa44,1■■■■■ 4,65
Shf-201ENSMUST00000048635 LrpprcQ6PB66 1392 aaKnown RBP44,08■■■■■ 4,65
Shf-201ENSMUST00000048635 Lrriq1Q0P5X1 1673 aa44,02■■■■■ 4,64
Shf-201ENSMUST00000048635 Dhx29Q6PGC1 1365 aaKnown RBP43,94■■■■■ 4,62
Shf-201ENSMUST00000048635 Grin2bQ01097 1482 aa43,91■■■■■ 4,62
Shf-201ENSMUST00000048635 PogzQ8BZH4 1409 aaKnown RBP43,89■■■■■ 4,62
Shf-201ENSMUST00000048635 Crocc2F6XLV1 1638 aa43,86■■■■■ 4,61
Shf-201ENSMUST00000048635 NrkQ9R0G8 1455 aa43,74■■■■■ 4,59
Shf-201ENSMUST00000048635 Duox2A2AQ99 1517 aa43,7■■■■■ 4,59
Shf-201ENSMUST00000048635 Efcab5A0JP43 1406 aa43,65■■■■■ 4,58
Shf-201ENSMUST00000048635 Urb2E9Q7L1 1524 aaKnown RBP43,61■■■■■ 4,57
Shf-201ENSMUST00000048635 Plb1Q3TTY0 1478 aa43,57■■■■■ 4,57
Shf-201ENSMUST00000048635 Shroom4Q1W617 1475 aa43,52■■■■■ 4,56
Shf-201ENSMUST00000048635 Eif4g3Q80XI3 1579 aaKnown RBP43,46■■■■■ 4,55
Shf-201ENSMUST00000048635 Ift140E9PY46 1464 aa43,41■■■■■ 4,54
Shf-201ENSMUST00000048635 Samd9lQ69Z37 1561 aa43,35■■■■■ 4,53
Shf-201ENSMUST00000048635 PtprkP35822 1457 aa43,32■■■■■ 4,53
Shf-201ENSMUST00000048635 Pbrm1Q8BSQ9 1634 aaKnown RBP43,24■■■■■ 4,51
Shf-201ENSMUST00000048635 Rapgef2Q8CHG7 1496 aa43,2■■■■■ 4,51
Shf-201ENSMUST00000048635 Gab3Q8BSM5 595 aa43,15■■■■■ 4,5
Shf-201ENSMUST00000048635 Disp1Q3TDN0 1521 aa43,13■■■■■ 4,49
Shf-201ENSMUST00000048635 Npm2Q80W85 207 aa43,12■■■■■ 4,49
Shf-201ENSMUST00000048635 SynmQ70IV5 1561 aa43,05■■■■■ 4,48
Shf-201ENSMUST00000048635 Rusc2Q80U22 1514 aa43,02■■■■■ 4,48
Shf-201ENSMUST00000048635 Setd1bQ8CFT2 1985 aa43,02■■■■■ 4,48
Shf-201ENSMUST00000048635 Mroh2bQ7M6Y6 1581 aa42,98■■■■■ 4,47
Shf-201ENSMUST00000048635 Nup160Q9Z0W3 1402 aaKnown RBP42,97■■■■■ 4,47
Shf-201ENSMUST00000048635 Rad54l2Q99NG0 1466 aa42,96■■■■■ 4,47
Shf-201ENSMUST00000048635 Map3k1P53349 1493 aa42,92■■■■■ 4,46
Shf-201ENSMUST00000048635 Cc2d2bA0A286YDU8 1405 aa42,91■■■■■ 4,46
Shf-201ENSMUST00000048635 Gpatch8A2A6A1 1505 aa42,91■■■■■ 4,46
Shf-201ENSMUST00000048635 Eif4g1Q6NZJ6 1600 aaKnown RBP42,91■■■■■ 4,46
Shf-201ENSMUST00000048635 Grin2aP35436 1464 aa42,9■■■■■ 4,46
Shf-201ENSMUST00000048635 Magi3Q9EQJ9 1476 aa42,9■■■■■ 4,46
Shf-201ENSMUST00000048635 Zeb1Q64318 1117 aa42,88■■■■■ 4,45
Shf-201ENSMUST00000048635 Cep162Q6ZQ06 1403 aa42,86■■■■■ 4,45
Shf-201ENSMUST00000048635 Arhgap35Q91YM2 1499 aa42,82■■■■■ 4,45
Shf-201ENSMUST00000048635 Pla2r1Q62028 1487 aa42,75■■■■■ 4,43
Shf-201ENSMUST00000048635 AqrQ8CFQ3 1481 aaKnown RBP42,73■■■■■ 4,43
Shf-201ENSMUST00000048635 Carmil1Q6EDY6 1374 aa42,64■■■■■ 4,42
Retrieved 100 of 22,080 RNA–protein pairs in 8,8 ms