RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Calcoco2A2A6M5 331 aa22.21■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Cspp1B2RX88 1205 aa22.21■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Me1P06801 572 aa22.21■■□□□ 1.15
Scaf11-201ENSMUST00000047835 TmpoQ61033 693 aaKnown RBP22.21■■□□□ 1.15
Scaf11-201ENSMUST00000047835 4930572O03RikQ8C5Y0 211 aa22.21■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Rec8Q8C5S7 591 aa22.21■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Wdr78E9PYY5 807 aa22.2■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Nol8Q3UHX0 1147 aaKnown RBP22.2■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Cwc27Q3TKY6 469 aa22.2■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Ppp2r3aB2RXC8 1150 aa22.19■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Zkscan2G3X952 960 aa22.19■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Acsbg1Q99PU5 721 aa22.19■■□□□ 1.14
Scaf11-201ENSMUST00000047835 VgfQ0VGU4 617 aa22.19■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Mlh3A0A1Y7VMP7 1443 aa22.19■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Kiaa0754Q69ZZ9 979 aa22.19■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Usp48Q3V0C5 1052 aa22.19■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Ttc19Q8CC21 365 aa22.18■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Tpm3P21107 285 aaKnown RBP22.18■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Fchsd2Q3USJ8 740 aa22.18■■□□□ 1.14
Scaf11-201ENSMUST00000047835 ApobrQ8VBT6 942 aa22.17■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Asxl1P59598 1514 aa22.17■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Kcnh8P59111 1102 aa22.16■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Gabpb2P81069 414 aa22.16■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Mcm2P97310 904 aa22.16■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Agtpbp1Q641K1 1218 aa22.16■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Mapk8ip1Q9WVI9 707 aa22.16■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Ankrd26Q811D2 1581 aa22.15■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Hnrnpul1Q8VDM6 859 aaKnown RBP22.15■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Fbln2P37889 1221 aa22.15■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Slx4Q6P1D7 1565 aa22.15■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Gpatch8A2A6A1 1505 aa22.14■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Srgap3Q812A2 1099 aa22.14■■□□□ 1.14
Scaf11-201ENSMUST00000047835 UvssaQ9D479 717 aa22.14■■□□□ 1.14
Scaf11-201ENSMUST00000047835 Gtf2f1Q3THK3 508 aaKnown RBP22.14■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Washc4Q3UMB9 1173 aa22.13■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Tpm4Q6IRU2 248 aa22.13■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Flad1Q8R123 492 aa22.13■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Psma5Q9Z2U1 241 aaKnown RBP22.13■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Trim30aP15533 496 aa22.12■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Dmrt2Q8BG36 561 aa22.12■■□□□ 1.13
Scaf11-201ENSMUST00000047835 AI481877A2ALV5 1481 aa22.12■■□□□ 1.13
Scaf11-201ENSMUST00000047835 TnikP83510 1323 aa22.12■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Tpm2P58774 284 aa22.12■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Ell2Q3UKU1 639 aa22.12■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Glipr1l2Q9CQ35 332 aa22.12■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Rrp12Q6P5B0 1295 aaKnown RBP22.11■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Cchcr1Q8K2I2 770 aa22.11■■□□□ 1.13
Scaf11-201ENSMUST00000047835 ZgpatQ8VDM1 511 aa22.11■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Bcl11aQ9QYE3 773 aa22.11■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Kif4P33174 1231 aa22.1■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Mapkbp1Q6NS57 1503 aa22.1■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Ints3Q7TPD0 1041 aaKnown RBP22.1■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Rapgef4Q9EQZ6 1011 aa22.1■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Bicdl1A0JNT9 577 aa22.1■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Rbm28Q8CGC6 750 aaKnown RBP22.1■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Gripap1Q8VD04 806 aa22.1■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Ncoa3O09000 1398 aa22.09■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Kcnh5Q920E3 988 aa22.09■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Cog6Q8R3I3 657 aa22.09■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Fancd2Q80V62 1450 aa22.09■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Ccne1Q61457 408 aa22.08■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Ppp1r15aP17564 657 aa22.08■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Cfap99A0A140LIX9 648 aa22.08■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Trim34aQ99PP6 485 aa22.08■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Atxn3Q9CVD2 355 aa22.08■■□□□ 1.13
Scaf11-201ENSMUST00000047835 Ccdc43Q9CR29 222 aaKnown RBP22.08■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Strn4P58404 760 aa22.08■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Thoc2B1AZI6 1594 aaKnown RBP22.07■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Becn1O88597 448 aa22.07■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Tpm1P58771 284 aa22.07■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Gpatch3Q8BIY1 525 aa22.07■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Trim34bJ3QNR8 485 aa22.07■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Rfx7F8VPJ6 1459 aa22.07■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Eif4g1Q6NZJ6 1600 aaKnown RBP22.06■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Prl7d1P04769 244 aa22.06■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Babam1Q3UI43 333 aa22.06■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Gm156Q58A37 223 aa22.06■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Eif3bQ8JZQ9 803 aaKnown RBP22.06■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Eif3aP23116 1344 aaKnown RBP22.06■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Maco1Q7TQE6 664 aaKnown RBP22.06■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Odf2A3KGV1 830 aaKnown RBP22.05■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Polr3aB2RXC6 1390 aa22.05■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Ankib1Q6ZPS6 1085 aa22.05■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Tnpo1Q8BFY9 898 aaKnown RBP22.05■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Zeb2Q9R0G7 1215 aa22.05■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Gcc1Q9D4H2 778 aa22.04■■□□□ 1.12
Scaf11-201ENSMUST00000047835 A0A1L1SQF0 893 aa22.04■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Odf2lQ9D478 642 aa22.04■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Pde4bB1AWC9 736 aa22.03■■□□□ 1.12
Scaf11-201ENSMUST00000047835 OptnQ8K3K8 584 aa22.03■■□□□ 1.12
Scaf11-201ENSMUST00000047835 MvpQ9EQK5 861 aa22.03■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Ythdc2B2RR83 1445 aaKnown RBP22.03■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Drc7Q6V3W6 876 aa22.03■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Tmc1Q8R4P5 757 aa22.03■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Ehmt1Q5DW34 1296 aa22.02■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Ccdc155Q80VJ8 648 aa22.02■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Kif18aQ91WD7 886 aa22.02■■□□□ 1.12
Scaf11-201ENSMUST00000047835 March6Q6ZQ89 909 aa22.02■■□□□ 1.12
Scaf11-201ENSMUST00000047835 NgdnQ9DB96 315 aaKnown RBP22.02■■□□□ 1.12
Scaf11-201ENSMUST00000047835 Jakmip1Q8BVL9 626 aa22.02■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 73.6 ms