RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Slit2Q9R1B9 1521 aa12.03□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Cdk19Q8BWD8 501 aa12.02□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 PzpQ61838 1495 aa12.02□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Myt1Q8CFC2 1127 aa12.02□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Q9D9H8 365 aa12.01□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Zranb1Q7M760 708 aa12.01□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Gas2l2Q5SSG4 860 aa12□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 PaskQ8CEE6 1383 aa12□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Myo5bP21271 1818 aa12□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Unc13bQ9Z1N9 1602 aa12□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Cnga1P29974 684 aa12□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Atp2b2Q9R0K7 1198 aa12□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Speer4f1Q9D5Q6 258 aa11.99□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Adgrb1Q3UHD1 1582 aa11.99□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Abcc10Q8R4P9 1501 aa11.99□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Robo1O89026 1612 aa11.99□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Rwdd1Q9CQK7 243 aa11.99□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Trpm3Q5F4S9 1721 aa11.99□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Rad21Q61550 635 aaKnown RBP11.98□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Ptpn23Q6PB44 1692 aa11.98□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Asxl2Q8BZ32 1370 aa11.98□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Camta1A2A891 1682 aa11.98□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Topaz1E5FYH1 1653 aa11.98□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Q4VA45 678 aa11.98□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Pak3Q61036 559 aa11.98□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Znf335A2A5K6 1337 aa11.97□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Ttc21aQ8C0S4 1314 aa11.97□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 AampJ3QN89 436 aa11.97□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Ciz1Q8VEH2 845 aa11.97□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Stk26Q99JT2 416 aa11.97□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 CemipQ8BI06 1361 aa11.96□□□□□ -0.49
Ctnna1-201ENSMUST00000042345 Utp14aQ640M1 767 aaKnown RBP11.96□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Idi2Q8BFZ6 227 aa11.96□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Nlrp6Q91WS2 869 aa11.96□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Hoxb7P09024 217 aa11.95□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Rimbp3Q3V0F0 1606 aa11.94□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Smc5Q8CG46 1101 aaKnown RBP11.94□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Fchsd2Q3USJ8 740 aa11.93□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Atxn3Q9CVD2 355 aa11.93□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Exosc9Q9JHI7 438 aaKnown RBP11.93□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Ankrd50F7BE84 1390 aa11.93□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Uhrf1bp1lA2RSJ4 1457 aa11.93□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Cdk12Q14AX6 1484 aaKnown RBP11.92□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Tsen2Q6P7W5 460 aa11.91□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Phlpp1Q8CHE4 1687 aa11.91□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Astn2Q80Z10 1352 aa11.91□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Ppp1r15aP17564 657 aa11.91□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Ttll13A4Q9F6 804 aa11.9□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Rtl5Q5DTT4 599 aa11.9□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Gli3Q61602 1583 aa11.9□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 C3P01027 1663 aa11.9□□□□□ -0.5
Ctnna1-201ENSMUST00000042345 Slc4a3P16283 1227 aa11.9□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 CatipB9EKE5 520 aa11.89□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Sipa1l2Q80TE4 1722 aa11.89□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Apaf1O88879 1249 aa11.89□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Cavin4A2AMM0 362 aa11.89□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Slc12a5Q91V14 1138 aa11.89□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Dusp27Q148W8 1138 aa11.88□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Trim58Q5NCC9 485 aa11.88□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Wnk3Q80XP9 1757 aa11.88□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Col14a1Q80X19 1797 aa11.88□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Alpk3Q924C5 1678 aa11.88□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Siglec1Q62230 1695 aa11.87□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 CastP51125 788 aa11.87□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Duxf3A0A0N4SV92 674 aa11.87□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Tspyl2Q7TQI8 677 aa11.86□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 U2af1Q9D883 239 aaKnown RBP11.86□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Neurod2Q62414 383 aa11.85□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Rlbp1Q9Z275 317 aa11.85□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Arfgef2A2A5R2 1792 aa11.85□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Rsph6aQ8CDR2 708 aa11.85□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Mapk8ip3Q9ESN9 1337 aa11.84□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Ahnak2E9PYB0 1738 aaKnown RBP11.84□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 NeflP08551 543 aa11.84□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Psme1P97371 249 aa11.84□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Scaf1Q5U4C3 1256 aaKnown RBP11.84□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Tmc1Q8R4P5 757 aa11.84□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Ipo9Q91YE6 1041 aa11.84□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Nfat5Q9WV30 1534 aa11.84□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 PalmQ9Z0P4 383 aa11.83□□□□□ -0.51
Ctnna1-201ENSMUST00000042345 Parp14Q2EMV9 1817 aa11.83□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Ccar1Q8CH18 1146 aaKnown RBP11.83□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Nkx1-2P42580 305 aa11.82□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Txndc2Q6P902 515 aa11.82□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Atp1b4Q99ME6 356 aa11.82□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Ccdc171E9Q1U1 1324 aa11.81□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Pank1Q8K4K6 548 aa11.81□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Hs1bp3Q3TC93 395 aa11.81□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Rad17Q6NXW6 688 aa11.81□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 EspnQ9ET47 871 aa11.81□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Nid2O88322 1403 aa11.8□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Q3UJC8 639 aa11.8□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 DiexfQ8BTT6 772 aaKnown RBP11.8□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Swt1Q9DBQ9 907 aa11.8□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Col18a1P39061 1774 aa11.79□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 BcorQ8CGN4 1759 aa11.79□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 HnrnpmQ9D0E1 729 aaKnown RBP11.79□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Nrxn3Q6P9K9 1571 aa11.79□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Ksr2Q3UVC0 959 aa11.78□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Nsd3Q6P2L6 1439 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms