RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Dnajc5gQ8C632 165 aa26.8■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Apaf1O88879 1249 aa26.79■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Mdc1Q5PSV9 1707 aa26.79■■□□□ 1.88
Cdx1-201ENSMUST00000025521 PaskQ8CEE6 1383 aa26.79■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Gas2l2Q5SSG4 860 aa26.79■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Znf521Q6KAS7 1311 aa26.78■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Lmtk3Q5XJV6 1424 aa26.78■■□□□ 1.88
Cdx1-201ENSMUST00000025521 N4bp2F8VQG7 1678 aaKnown RBP26.78■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Atxn3Q9CVD2 355 aa26.78■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Chd4Q6PDQ2 1915 aaKnown RBP26.77■■□□□ 1.88
Cdx1-201ENSMUST00000025521 IghaA0A0A6YXW6 389 aa26.76■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Fchsd2Q3USJ8 740 aa26.76■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Sirt1Q923E4 737 aa26.76■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Rreb1Q3UH06 1700 aaKnown RBP26.76■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Spef2Q8C9J3 1734 aa26.75■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Trim58Q5NCC9 485 aa26.75■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Mapk8ip3Q9ESN9 1337 aa26.74■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Rims2Q9EQZ7 1530 aa26.74■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Cavin4A2AMM0 362 aa26.74■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Dusp27Q148W8 1138 aa26.73■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Ccar1Q8CH18 1146 aaKnown RBP26.72■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Apbb1Q9QXJ1 710 aa26.72■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Hoxb7P09024 217 aa26.71■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Atp7bQ64446 1462 aa26.71■■□□□ 1.87
Cdx1-201ENSMUST00000025521 D430041D05RikF6ZGR6 1678 aa26.71■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Ttll13A4Q9F6 804 aa26.71■■□□□ 1.87
Cdx1-201ENSMUST00000025521 Ppp1r15aP17564 657 aa26.71■■□□□ 1.87
Cdx1-201ENSMUST00000025521 CatipB9EKE5 520 aa26.7■■□□□ 1.86
Cdx1-201ENSMUST00000025521 Kif20bQ80WE4 1774 aaKnown RBP26.69■■□□□ 1.86
Cdx1-201ENSMUST00000025521 Slc12a5Q91V14 1138 aa26.69■■□□□ 1.86
Cdx1-201ENSMUST00000025521 Smc5Q8CG46 1101 aaKnown RBP26.68■■□□□ 1.86
Cdx1-201ENSMUST00000025521 Ksr2Q3UVC0 959 aa26.67■■□□□ 1.86
Cdx1-201ENSMUST00000025521 Safb2Q80YR5 991 aaKnown RBP26.67■■□□□ 1.86
Cdx1-201ENSMUST00000025521 NalcnQ8BXR5 1738 aa26.67■■□□□ 1.86
Cdx1-201ENSMUST00000025521 Ttc21aQ8C0S4 1314 aa26.67■■□□□ 1.86
Cdx1-201ENSMUST00000025521 Znf335A2A5K6 1337 aa26.65■■□□□ 1.86
Cdx1-201ENSMUST00000025521 Bcl9Q9D219 1425 aa26.65■■□□□ 1.86
Cdx1-201ENSMUST00000025521 EspnQ9ET47 871 aa26.65■■□□□ 1.86
Cdx1-201ENSMUST00000025521 Mon2Q80TL7 1715 aa26.64■■□□□ 1.85
Cdx1-201ENSMUST00000025521 Ankrd50F7BE84 1390 aa26.63■■□□□ 1.85
Cdx1-201ENSMUST00000025521 Q4VA45 678 aa26.63■■□□□ 1.85
Cdx1-201ENSMUST00000025521 Med1Q925J9 1575 aa26.63■■□□□ 1.85
Cdx1-201ENSMUST00000025521 Ipo9Q91YE6 1041 aa26.62■■□□□ 1.85
Cdx1-201ENSMUST00000025521 Astn2Q80Z10 1352 aa26.62■■□□□ 1.85
Cdx1-201ENSMUST00000025521 Pank1Q8K4K6 548 aa26.61■■□□□ 1.85
Cdx1-201ENSMUST00000025521 HnrnpmQ9D0E1 729 aaKnown RBP26.61■■□□□ 1.85
Cdx1-201ENSMUST00000025521 PalmQ9Z0P4 383 aa26.61■■□□□ 1.85
Cdx1-201ENSMUST00000025521 C5P06684 1680 aa26.61■■□□□ 1.85
Cdx1-201ENSMUST00000025521 Als2Q920R0 1651 aa26.61■■□□□ 1.85
Cdx1-201ENSMUST00000025521 Tspyl2Q7TQI8 677 aa26.61■■□□□ 1.85
Cdx1-201ENSMUST00000025521 Uhrf1bp1lA2RSJ4 1457 aa26.6■■□□□ 1.85
Cdx1-201ENSMUST00000025521 Swt1Q9DBQ9 907 aa26.59■■□□□ 1.85
Cdx1-201ENSMUST00000025521 Chmp5Q9D7S9 219 aa26.58■■□□□ 1.85
Cdx1-201ENSMUST00000025521 CastP51125 788 aa26.57■■□□□ 1.84
Cdx1-201ENSMUST00000025521 Q3UJC8 639 aa26.56■■□□□ 1.84
Cdx1-201ENSMUST00000025521 Abcc10Q8R4P9 1501 aa26.56■■□□□ 1.84
Cdx1-201ENSMUST00000025521 Ccdc171E9Q1U1 1324 aa26.56■■□□□ 1.84
Cdx1-201ENSMUST00000025521 Birc3O08863 600 aa26.56■■□□□ 1.84
Cdx1-201ENSMUST00000025521 Znf316Q6PGE4 1016 aa26.56■■□□□ 1.84
Cdx1-201ENSMUST00000025521 CemipQ8BI06 1361 aa26.54■■□□□ 1.84
Cdx1-201ENSMUST00000025521 Ubr1O70481 1757 aa26.54■■□□□ 1.84
Cdx1-201ENSMUST00000025521 NudcO35685 332 aaKnown RBP26.53■■□□□ 1.84
Cdx1-201ENSMUST00000025521 Rsph6aQ8CDR2 708 aa26.53■■□□□ 1.84
Cdx1-201ENSMUST00000025521 Scn7aB1AYL1 1681 aa26.53■■□□□ 1.84
Cdx1-201ENSMUST00000025521 4930407I10RikD3Z5T8 1512 aa26.53■■□□□ 1.84
Cdx1-201ENSMUST00000025521 Pik3c2aQ61194 1686 aa26.52■■□□□ 1.84
Cdx1-201ENSMUST00000025521 Duxf3A0A0N4SV92 674 aa26.51■■□□□ 1.83
Cdx1-201ENSMUST00000025521 Map2P20357 1828 aa26.5■■□□□ 1.83
Cdx1-201ENSMUST00000025521 Rbm25B2RY56 838 aaKnown RBP26.5■■□□□ 1.83
Cdx1-201ENSMUST00000025521 Col16a1Q8BLX7 1580 aa26.5■■□□□ 1.83
Cdx1-201ENSMUST00000025521 Cdk12Q14AX6 1484 aaKnown RBP26.49■■□□□ 1.83
Cdx1-201ENSMUST00000025521 B4galnt3Q6L8S8 986 aa26.49■■□□□ 1.83
Cdx1-201ENSMUST00000025521 Polr3glQ8R0C0 218 aa26.48■■□□□ 1.83
Cdx1-201ENSMUST00000025521 Rlbp1Q9Z275 317 aa26.43■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Slit2Q9R1B9 1521 aa26.41■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Gnai1B2RSH2 354 aa26.41■■□□□ 1.82
Cdx1-201ENSMUST00000025521 GphnQ8BUV3 769 aaKnown RBP26.41■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Trim26Q99PN3 545 aa26.41■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Gnai3Q9DC51 354 aa26.41■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Plppr3Q7TPB0 716 aa26.4■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Ccdc60Q8C4J0 545 aa26.4■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Dbr1Q923B1 550 aa26.4■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Zfp777B9EKF4 885 aa26.39■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Hs1bp3Q3TC93 395 aa26.39■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Cdc37l1Q9CZP7 335 aa26.39■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Sos1Q62245 1319 aa26.39■■□□□ 1.82
Cdx1-201ENSMUST00000025521 Ptpn23Q6PB44 1692 aa26.39■■□□□ 1.81
Cdx1-201ENSMUST00000025521 Topaz1E5FYH1 1653 aa26.38■■□□□ 1.81
Cdx1-201ENSMUST00000025521 G3bp1P97855 465 aaKnown RBP26.38■■□□□ 1.81
Cdx1-201ENSMUST00000025521 Iqcf3Q9D498 203 aa26.38■■□□□ 1.81
Cdx1-201ENSMUST00000025521 Eif4a2P10630 407 aa26.37■■□□□ 1.81
Cdx1-201ENSMUST00000025521 Scaf1Q5U4C3 1256 aaKnown RBP26.37■■□□□ 1.81
Cdx1-201ENSMUST00000025521 Atl3Q91YH5 541 aa26.37■■□□□ 1.81
Cdx1-201ENSMUST00000025521 Rimbp3Q3V0F0 1606 aa26.35■■□□□ 1.81
Cdx1-201ENSMUST00000025521 Tmc1Q8R4P5 757 aa26.35■■□□□ 1.81
Cdx1-201ENSMUST00000025521 Camta1A2A891 1682 aa26.34■■□□□ 1.81
Cdx1-201ENSMUST00000025521 PtprvP70289 1705 aa26.33■■□□□ 1.81
Cdx1-201ENSMUST00000025521 Rad17Q6NXW6 688 aa26.33■■□□□ 1.81
Cdx1-201ENSMUST00000025521 Parp14Q2EMV9 1817 aa26.33■■□□□ 1.8
Cdx1-201ENSMUST00000025521 Vamp4O70480 141 aa26.32■■□□□ 1.8
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms