RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 NischQ80TM9 1593 aa41,55■■■■■ 4,24
Cdx1-201ENSMUST00000025521 Gm35339A0A140LHH9 1649 aa41,4■■■■■ 4,22
Cdx1-201ENSMUST00000025521 Abcc9P70170 1546 aa40,45■■■■■ 4,07
Cdx1-201ENSMUST00000025521 Abcc8B2RUS7 1588 aa39,62■■■■□ 3,93
Cdx1-201ENSMUST00000025521 Rhox8Q6VSS7 320 aa37,59■■■■□ 3,61
Cdx1-201ENSMUST00000025521 Rtl1Q7M732 1744 aa37,57■■■■□ 3,61
Cdx1-201ENSMUST00000025521 Dcaf1Q80TR8 1506 aa37,13■■■■□ 3,53
Cdx1-201ENSMUST00000025521 ScribQ80U72 1612 aa37,13■■■■□ 3,53
Cdx1-201ENSMUST00000025521 Ccdc180J3QNE4 1664 aa36,61■■■■□ 3,45
Cdx1-201ENSMUST00000025521 Rb1cc1Q9ESK9 1588 aa36,4■■■■□ 3,42
Cdx1-201ENSMUST00000025521 Kdm5dQ62240 1548 aa36,31■■■■□ 3,4
Cdx1-201ENSMUST00000025521 NacadQ5SWP3 1504 aa36,14■■■■□ 3,38
Cdx1-201ENSMUST00000025521 Zcchc6Q5BLK4 1491 aaKnown RBP36,06■■■■□ 3,36
Cdx1-201ENSMUST00000025521 Baz1aO88379 1555 aa36,03■■■■□ 3,36
Cdx1-201ENSMUST00000025521 Crybg2B7ZCC2 1516 aa35,61■■■■□ 3,29
Cdx1-201ENSMUST00000025521 Sycp2Q9CUU3 1500 aa35,34■■■■□ 3,25
Cdx1-201ENSMUST00000025521 Smarca2Q6DIC0 1577 aa35,21■■■■□ 3,23
Cdx1-201ENSMUST00000025521 Ccdc136Q3TVA9 1136 aa34,85■■■■□ 3,17
Cdx1-201ENSMUST00000025521 HrcG5E8J6 738 aa34,74■■■■□ 3,15
Cdx1-201ENSMUST00000025521 BicraF8VPZ9 1578 aa34,58■■■■□ 3,13
Cdx1-201ENSMUST00000025521 Trim41Q5NCC3 630 aa34,49■■■■□ 3,11
Cdx1-201ENSMUST00000025521 Brd4Q9ESU6 1400 aaKnown RBP34,24■■■■□ 3,07
Cdx1-201ENSMUST00000025521 Cecr2E9Q2Z1 1453 aa34,19■■■■□ 3,06
Cdx1-201ENSMUST00000025521 Synj1Q8CHC4 1574 aa33,95■■■■□ 3,03
Cdx1-201ENSMUST00000025521 Cep164Q5DU05 1446 aa33,9■■■■□ 3,02
Cdx1-201ENSMUST00000025521 CftrP26361 1476 aa33,8■■■■□ 3
Cdx1-201ENSMUST00000025521 Cttnbp2B9EJA2 1648 aa33,79■■■■□ 3
Cdx1-201ENSMUST00000025521 Smarca4Q3TKT4 1613 aaKnown RBP33,77■■■■□ 3
Cdx1-201ENSMUST00000025521 Golga3P55937 1487 aa33,73■■■□□ 2,99
Cdx1-201ENSMUST00000025521 Top2bQ64511 1612 aa33,56■■■□□ 2,96
Cdx1-201ENSMUST00000025521 Rpgrip1Q9EPQ2 1331 aa33,53■■■□□ 2,96
Cdx1-201ENSMUST00000025521 Rsf1E9PWW9 1441 aaKnown RBP33,49■■■□□ 2,95
Cdx1-201ENSMUST00000025521 Cngb1E1AZ71 1325 aa33,43■■■□□ 2,94
Cdx1-201ENSMUST00000025521 Ccdc88bQ4QRL3 1481 aa33,31■■■□□ 2,92
Cdx1-201ENSMUST00000025521 Iqgap2Q3UQ44 1575 aa33,3■■■□□ 2,92
Cdx1-201ENSMUST00000025521 Chic1Q8CBW7 227 aa33,24■■■□□ 2,91
Cdx1-201ENSMUST00000025521 Atad2bE9Q166 1460 aaKnown RBP33,23■■■□□ 2,91
Cdx1-201ENSMUST00000025521 Esf1Q3V1V3 845 aaKnown RBP33,16■■■□□ 2,9
Cdx1-201ENSMUST00000025521 Acin1Q9JIX8 1338 aaKnown RBP33,14■■■□□ 2,9
Cdx1-201ENSMUST00000025521 Pds5bQ4VA53 1446 aaKnown RBP33,12■■■□□ 2,89
Cdx1-201ENSMUST00000025521 Cc2d2aQ8CFW7 1633 aa33,1■■■□□ 2,89
Cdx1-201ENSMUST00000025521 Fmn1Q05860 1466 aa32,98■■■□□ 2,87
Cdx1-201ENSMUST00000025521 Ehmt2Q9Z148 1263 aaKnown RBP32,82■■■□□ 2,84
Cdx1-201ENSMUST00000025521 Top2aQ01320 1528 aaKnown RBP32,79■■■□□ 2,84
Cdx1-201ENSMUST00000025521 Wdr62Q3U3T8 1523 aa32,71■■■□□ 2,83
Cdx1-201ENSMUST00000025521 Gab3Q8BSM5 595 aa32,7■■■□□ 2,83
Cdx1-201ENSMUST00000025521 TnnQ80Z71 1560 aa32,67■■■□□ 2,82
Cdx1-201ENSMUST00000025521 Frmpd1A2AKB4 1549 aa32,63■■■□□ 2,81
Cdx1-201ENSMUST00000025521 Rapgef2Q8CHG7 1496 aa32,59■■■□□ 2,81
Cdx1-201ENSMUST00000025521 Ercc6F8VPZ5 1481 aa32,48■■■□□ 2,79
Cdx1-201ENSMUST00000025521 Unc13aQ4KUS2 1712 aa32,44■■■□□ 2,78
Cdx1-201ENSMUST00000025521 Lamc3Q9R0B6 1581 aa32,42■■■□□ 2,78
Cdx1-201ENSMUST00000025521 Eif4g1Q6NZJ6 1600 aaKnown RBP32,25■■■□□ 2,75
Cdx1-201ENSMUST00000025521 Cep162Q6ZQ06 1403 aa32,24■■■□□ 2,75
Cdx1-201ENSMUST00000025521 Thoc2B1AZI6 1594 aaKnown RBP32,21■■■□□ 2,75
Cdx1-201ENSMUST00000025521 Camsap1A2AHC3 1581 aa32,06■■■□□ 2,72
Cdx1-201ENSMUST00000025521 Kif15Q6P9L6 1387 aa32,03■■■□□ 2,72
Cdx1-201ENSMUST00000025521 NrkQ9R0G8 1455 aa31,98■■■□□ 2,71
Cdx1-201ENSMUST00000025521 Phldb1Q6PDH0 1371 aaKnown RBP31,95■■■□□ 2,71
Cdx1-201ENSMUST00000025521 Fam135aQ6NS59 1506 aa31,86■■■□□ 2,69
Cdx1-201ENSMUST00000025521 Shroom4Q1W617 1475 aa31,85■■■□□ 2,69
Cdx1-201ENSMUST00000025521 Ccdc18Q640L5 1455 aa31,85■■■□□ 2,69
Cdx1-201ENSMUST00000025521 Npm2Q80W85 207 aa31,84■■■□□ 2,69
Cdx1-201ENSMUST00000025521 Arhgap35Q91YM2 1499 aa31,83■■■□□ 2,69
Cdx1-201ENSMUST00000025521 PtprkP35822 1457 aa31,81■■■□□ 2,68
Cdx1-201ENSMUST00000025521 Map3k1P53349 1493 aa31,76■■■□□ 2,67
Cdx1-201ENSMUST00000025521 Grin2bQ01097 1482 aa31,76■■■□□ 2,67
Cdx1-201ENSMUST00000025521 Myt1lP97500 1187 aa31,66■■■□□ 2,66
Cdx1-201ENSMUST00000025521 Mier1Q5UAK0 511 aa31,63■■■□□ 2,65
Cdx1-201ENSMUST00000025521 NefmP08553 848 aa31,6■■■□□ 2,65
Cdx1-201ENSMUST00000025521 Cux2P70298 1426 aa31,6■■■□□ 2,65
Cdx1-201ENSMUST00000025521 Clip1Q922J3 1391 aa31,58■■■□□ 2,65
Cdx1-201ENSMUST00000025521 Il27Q8K3I6 234 aa31,54■■■□□ 2,64
Cdx1-201ENSMUST00000025521 Baz1bQ9Z277 1479 aa31,52■■■□□ 2,64
Cdx1-201ENSMUST00000025521 Mroh2bQ7M6Y6 1581 aa31,52■■■□□ 2,64
Cdx1-201ENSMUST00000025521 AqrQ8CFQ3 1481 aaKnown RBP31,49■■■□□ 2,63
Cdx1-201ENSMUST00000025521 Ubl4bQ9CQ84 188 aa31,48■■■□□ 2,63
Cdx1-201ENSMUST00000025521 Eea1Q8BL66 1411 aa31,45■■■□□ 2,63
Cdx1-201ENSMUST00000025521 Efcab5A0JP43 1406 aa31,43■■■□□ 2,62
Cdx1-201ENSMUST00000025521 Erich3F6QRE9 1637 aa31,41■■■□□ 2,62
Cdx1-201ENSMUST00000025521 Arap1Q4LDD4 1452 aa31,38■■■□□ 2,61
Cdx1-201ENSMUST00000025521 LrpprcQ6PB66 1392 aaKnown RBP31,37■■■□□ 2,61
Cdx1-201ENSMUST00000025521 PogzQ8BZH4 1409 aaKnown RBP31,36■■■□□ 2,61
Cdx1-201ENSMUST00000025521 Arhgef5E9Q7D5 1581 aa31,35■■■□□ 2,61
Cdx1-201ENSMUST00000025521 UbtfP25976 765 aaKnown RBP31,33■■■□□ 2,61
Cdx1-201ENSMUST00000025521 Npm1Q61937 292 aaKnown RBP31,32■■■□□ 2,6
Cdx1-201ENSMUST00000025521 Duox2A2AQ99 1517 aa31,28■■■□□ 2,6
Cdx1-201ENSMUST00000025521 Ankrd26Q811D2 1581 aa31,27■■■□□ 2,6
Cdx1-201ENSMUST00000025521 Pcgf6Q99NA9 353 aa31,26■■■□□ 2,59
Cdx1-201ENSMUST00000025521 Setd5Q5XJV7 1441 aa31,24■■■□□ 2,59
Cdx1-201ENSMUST00000025521 Tiam1Q60610 1591 aa31,19■■■□□ 2,58
Cdx1-201ENSMUST00000025521 Carmil1Q6EDY6 1374 aa31,17■■■□□ 2,58
Cdx1-201ENSMUST00000025521 Ncapd3Q6ZQK0 1506 aa31,17■■■□□ 2,58
Cdx1-201ENSMUST00000025521 Plekhg3Q4VAC9 1341 aa31,13■■■□□ 2,57
Cdx1-201ENSMUST00000025521 SynmQ70IV5 1561 aa31,13■■■□□ 2,57
Cdx1-201ENSMUST00000025521 Lmo7E9PYF4 1699 aaKnown RBP31,12■■■□□ 2,57
Cdx1-201ENSMUST00000025521 Samd9lQ69Z37 1561 aa31,12■■■□□ 2,57
Cdx1-201ENSMUST00000025521 Zeb1Q64318 1117 aa31,1■■■□□ 2,57
Cdx1-201ENSMUST00000025521 Dhx29Q6PGC1 1365 aaKnown RBP31,07■■■□□ 2,56
Cdx1-201ENSMUST00000025521 Mrc2Q64449 1479 aa31,06■■■□□ 2,56
Retrieved 100 of 22,080 RNA–protein pairs in 57,8 ms