RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Znf541Q0GGX2 1363 aa23.92■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Atl3Q91YH5 541 aa23.92■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 KarsQ99MN1 595 aaKnown RBP23.92■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 PtprmP28828 1452 aa23.91■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Yeats2Q3TUF7 1407 aa23.91■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Uhrf1bp1B2KF50 1429 aa23.9■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Gtf3c3Q3TMP1 882 aa23.9■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Usp32F8VPZ3 1604 aa23.9■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Ciz1Q8VEH2 845 aa23.88■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Ppp1r3fQ9JIG4 799 aa23.88■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Shq1Q7TMX5 569 aa23.88■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Abca14E9Q8F8 1683 aa23.88■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Ttc21aQ8C0S4 1314 aa23.87■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 CastP51125 788 aa23.86■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Ankrd50F7BE84 1390 aa23.85■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 NinlQ6ZQ12 1394 aa23.85■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Cavin4A2AMM0 362 aa23.85■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Sptbn5F6UCX4 1208 aa23.85■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Gsto1O09131 240 aa23.85■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Tbc1d32Q3URV1 1296 aa23.85■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 PaskQ8CEE6 1383 aa23.84■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Atp1b4Q99ME6 356 aa23.84■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 NktrP30415 1453 aa23.83■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Phlpp2Q8BXA7 1320 aa23.83■■□□□ 1.41
Shkbp1-201ENSMUST00000003857 Kif13aQ9EQW7 1749 aa23.83■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Pnmal2G3X9N3 661 aa23.83■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Hs1bp3Q3TC93 395 aa23.83■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 PplQ9R269 1755 aa23.8■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Gm6268A2A3U9 297 aa23.8■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Rabep1O35551 862 aa23.8■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Cluap1Q8R3P7 413 aa23.79■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Cdk19Q8BWD8 501 aa23.78■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Pabpn1Q8CCS6 302 aaKnown RBP23.78■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Plekhg1F6S200 1446 aa23.78■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Ccdc171E9Q1U1 1324 aa23.78■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Atp7bQ64446 1462 aa23.78■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Htatsf1Q8BGC0 757 aa23.78■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Itsn1Q9Z0R4 1714 aa23.78■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Rbm25B2RY56 838 aaKnown RBP23.77■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 AU019823E9PUQ3 292 aa23.77■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Atp2b2Q9R0K7 1198 aa23.77■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Pik3r4Q8VD65 1358 aa23.77■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Tnpo1Q8BFY9 898 aaKnown RBP23.77■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Ccdc60Q8C4J0 545 aa23.77■■□□□ 1.4
Shkbp1-201ENSMUST00000003857 Maco1Q7TQE6 664 aaKnown RBP23.76■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 Gm156Q58A37 223 aa23.76■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 ArxO35085 564 aa23.75■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 Utp14aQ640M1 767 aaKnown RBP23.75■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 Q9D9H8 365 aa23.75■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 Fchsd2Q3USJ8 740 aa23.74■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 Slc12a5Q91V14 1138 aa23.74■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 Q4VA45 678 aa23.74■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 FanciQ8K368 1330 aa23.74■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 Trim28Q62318 834 aa23.73■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 Naip7Q9JIB3 1402 aa23.73■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 Nwd1A6H603 1563 aa23.72■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 Swt1Q9DBQ9 907 aa23.71■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 G3bp1P97855 465 aaKnown RBP23.71■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 PalmQ9Z0P4 383 aa23.71■■□□□ 1.39
Shkbp1-201ENSMUST00000003857 Map7O88735 730 aa23.7■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 Znf330Q922H9 316 aa23.7■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 Synj2Q9D2G5 1434 aa23.69■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 Mfap1aC0HKD8 439 aaKnown RBP23.67■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 Mfap1bC0HKD9 439 aaKnown RBP23.67■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 Zc3h13E9Q784 1729 aaKnown RBP23.66■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 Map3k19E9Q3S4 1311 aa23.65■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 SkilQ60665 675 aa23.65■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 Kif18aQ91WD7 886 aa23.65■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 Kif2cQ922S8 721 aa23.65■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 Nsd3Q6P2L6 1439 aa23.65■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 Kif1aP33173 1695 aa23.64■■□□□ 1.38
Shkbp1-201ENSMUST00000003857 Spef2Q8C9J3 1734 aa23.63■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Antxr1Q9CZ52 562 aa23.63■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Rangap1P46061 589 aaKnown RBP23.62■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Cdc37l1Q9CZP7 335 aa23.62■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Brd1E9PZ26 1189 aaKnown RBP23.62■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Ppp1r15aP17564 657 aa23.62■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Plekhm2Q80TQ5 1018 aa23.62■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Nutm1Q8BHP2 1126 aa23.61■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Aldh1l1Q8R0Y6 902 aa23.61■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Q3UPC7 1272 aa23.6■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Rsph4aQ8BYM7 716 aa23.6■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Vamp4O70480 141 aa23.59■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Afap1Q80YS6 731 aa23.59■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Cog6Q8R3I3 657 aa23.59■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Uhrf1bp1lA2RSJ4 1457 aa23.59■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Nectin2P32507 530 aa23.58■■□□□ 1.37
Shkbp1-201ENSMUST00000003857 Dip2aQ8BWT5 1523 aa23.58■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 Tmco5bQ80X59 307 aa23.57■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 MvpQ9EQK5 861 aa23.57■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 Catsper2A2ARP9 588 aa23.57■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 Wwc1Q5SXA9 1104 aa23.56■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 Birc3O08863 600 aa23.56■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 Plcd4Q8K3R3 807 aa23.56■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 KnstrnQ9D9Z1 312 aaKnown RBP23.56■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 RictorQ6QI06 1708 aa23.55■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 Terf2O35144 541 aa23.55■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 Gnai1B2RSH2 354 aa23.54■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 Ankrd44B2RXR6 993 aa23.54■■□□□ 1.36
Shkbp1-201ENSMUST00000003857 Gnai3Q9DC51 354 aa23.54■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms