RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Smarca5Q91ZW3 1051 aaKnown RBP11.64□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Aldh1l1Q8R0Y6 902 aa11.63□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Mroh2aD3Z750 1679 aa11.63□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Gm21190A0A0G2JGJ6 266 aa11.63□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Terf2O35144 541 aa11.63□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Q4VA45 678 aa11.63□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Kiaa1107Q80TK0 1369 aa11.63□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Fam208aQ69ZR9 1610 aaKnown RBP11.63□□□□□ -0.55
Col6a1-201ENSMUST00000001147 IbtkQ6ZPR6 1352 aaKnown RBP11.63□□□□□ -0.55
Col6a1-201ENSMUST00000001147 AatkQ80YE4 1365 aa11.63□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Hmox1P14901 289 aa11.62□□□□□ -0.55
Col6a1-201ENSMUST00000001147 PogkQ80TC5 607 aa11.62□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Sv2bQ8BG39 683 aa11.62□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Klhdc4Q921I2 584 aa11.62□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Rnf214Q8BFU3 668 aaKnown RBP11.62□□□□□ -0.55
Col6a1-201ENSMUST00000001147 PtmsQ9D0J8 101 aaKnown RBP11.62□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Ythdc2B2RR83 1445 aaKnown RBP11.62□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Zfp777B9EKF4 885 aa11.62□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Ddrgk1Q80WW9 315 aa11.62□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Ppip5k1A2ARP1 1436 aa11.61□□□□□ -0.55
Col6a1-201ENSMUST00000001147 CatipB9EKE5 520 aa11.61□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Fchsd2Q3USJ8 740 aa11.61□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Paxip1Q6NZQ4 1056 aa11.61□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Filip1lQ6P6L0 1131 aa11.61□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Cyp46a1Q9WVK8 500 aa11.61□□□□□ -0.55
Col6a1-201ENSMUST00000001147 CgnP59242 1191 aa11.61□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Mast1Q9R1L5 1570 aa11.61□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Tmc1Q8R4P5 757 aa11.61□□□□□ -0.55
Col6a1-201ENSMUST00000001147 NinlQ6ZQ12 1394 aa11.6□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Tbc1d9Q3UYK3 1264 aa11.6□□□□□ -0.55
Col6a1-201ENSMUST00000001147 IbspQ61711 324 aa11.6□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Rab11fip3Q8CHD8 1047 aa11.6□□□□□ -0.55
Col6a1-201ENSMUST00000001147 1700010I14RikQ7TPG0 532 aa11.59□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Phf14Q9D4H9 881 aa11.59□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Cfap74Q3UY96 1578 aa11.59□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Ppip5k2Q6ZQB6 1129 aa11.59□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Ak9G3UYQ4 1894 aa11.59□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.58□□□□□ -0.55
Col6a1-201ENSMUST00000001147 P2rx7Q9Z1M0 595 aa11.58□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Kif21bQ9QXL1 1668 aa11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Eif4g3Q80XI3 1579 aaKnown RBP11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 OvosQ3UU35 1456 aa11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 BccipQ9CWI3 316 aa11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Abcc1O35379 1528 aa11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Pola1P33609 1465 aa11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Wdr63B2RY71 923 aa11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 HnrnpmQ9D0E1 729 aaKnown RBP11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Ap3b2Q9JME5 1082 aa11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Trpm2Q91YD4 1506 aa11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 InsrP15208 1372 aa11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 VgfQ0VGU4 617 aa11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 St18Q80TY4 1045 aa11.58□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Plch2A2AP18 1501 aa11.57□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Gapvd1Q6PAR5 1458 aa11.57□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Tulp4Q9JIL5 1547 aa11.57□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Rsph4aQ8BYM7 716 aa11.57□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Pbrm1Q8BSQ9 1634 aaKnown RBP11.57□□□□□ -0.56
Col6a1-201ENSMUST00000001147 MecomP14404 1042 aa11.57□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Ankrd44B2RXR6 993 aa11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Gcc1Q9D4H2 778 aa11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Nphp4P59240 1425 aa11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Brd1E9PZ26 1189 aaKnown RBP11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Bcl2l13P59017 434 aa11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Hs1bp3Q3TC93 395 aa11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 TmpoQ61033 693 aaKnown RBP11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Zkscan1Q8BGS3 561 aaKnown RBP11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Stk3Q9JI10 497 aa11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Prkar2bP31324 416 aa11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Atp6v1dP57746 247 aa11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Wwc1Q5SXA9 1104 aa11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Col17a1Q07563 1470 aa11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Ttc41Q692V3 1318 aa11.56□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Ppp1r15aP17564 657 aa11.55□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Rassf8Q8CJ96 419 aa11.55□□□□□ -0.56
Col6a1-201ENSMUST00000001147 FanclQ9CR14 375 aa11.55□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Znf608Q56A10 1511 aa11.55□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Rusc2Q80U22 1514 aa11.55□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Mcm2P97310 904 aa11.55□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Gpatch11Q3UFS4 262 aa11.55□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Sh3bp5Q9Z131 463 aa11.55□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Fam135bQ9DAI6 1403 aa11.55□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Vamp4O70480 141 aa11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Ush1cQ9ES64 910 aa11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Cwc27Q3TKY6 469 aa11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Babam1Q3UI43 333 aa11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Srgap3Q812A2 1099 aa11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Pes1Q9EQ61 584 aaKnown RBP11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 DmtnQ9WV69 405 aa11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 AU022751B1B0V2 589 aa11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Smarce1O54941 411 aaKnown RBP11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Becn1O88597 448 aa11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Gripap1Q8VD04 806 aa11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Scaf11E9PZM7 1456 aaKnown RBP11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Ankrd50F7BE84 1390 aa11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Erc2Q6PH08 957 aa11.54□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Asxl2Q8BZ32 1370 aa11.53□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Usp54Q8BL06 1588 aaKnown RBP11.53□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Cfdp1O88271 295 aaKnown RBP11.53□□□□□ -0.56
Col6a1-201ENSMUST00000001147 MsnP26041 577 aaKnown RBP11.53□□□□□ -0.56
Col6a1-201ENSMUST00000001147 Fbxo2Q80UW2 297 aa11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms