RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 IL27RAQ6UWB1 636 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 MRPL10Q7Z7H8 261 aaKnown RBP7.31□□□□□ -1.24
LDHA-223ENST00000545215 LINC01465Q8N7H1 131 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 TRIML1Q8N9V2 468 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 CCDC26Q8TAB7 109 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 SMARCC2Q8TAQ2 1214 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 USP33Q8TEY7 942 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 CUL5Q93034 780 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 RRP36Q96EU6 259 aaKnown RBP7.31□□□□□ -1.24
LDHA-223ENST00000545215 TMX3Q96JJ7 454 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 CCDC74BQ96LY2 380 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 RNF26Q9BY78 433 aaPredicted RBP7.31□□□□□ -1.24
LDHA-223ENST00000545215 GLT8D2Q9H1C3 349 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 NCOA5Q9HCD5 579 aaKnown RBP7.31□□□□□ -1.24
LDHA-223ENST00000545215 SEC63Q9UGP8 760 aaKnown RBP7.31□□□□□ -1.24
LDHA-223ENST00000545215 ANAPC2Q9UJX6 822 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 MMP17Q9ULZ9 603 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 STK36Q9NRP7 1315 aa7.31□□□□□ -1.24
LDHA-223ENST00000545215 PRPF3O43395 683 aaKnown RBP7.3□□□□□ -1.24
LDHA-223ENST00000545215 SEMA7AO75326 666 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 EPHX1P07099 455 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 HNRNPLP14866 589 aaKnown RBP eCLIP7.3□□□□□ -1.242e-8■■□□□ 14.3
LDHA-223ENST00000545215 GLDCP23378 1020 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 L1CAMP32004 1257 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 BNC1Q01954 994 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 CUL4AQ13619 759 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 TDRD10Q5VZ19 366 aaKnown RBP7.3□□□□□ -1.24
LDHA-223ENST00000545215 NLRX1Q86UT6 975 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 METTL13Q8N6R0 699 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 CCDC12Q8WUD4 166 aaPredicted RBP7.3□□□□□ -1.24
LDHA-223ENST00000545215 EXOC4Q96A65 974 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 ZNF419Q96HQ0 510 aaPredicted RBP7.3□□□□□ -1.24
LDHA-223ENST00000545215 HSPA12BQ96MM6 686 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 FAM83CQ9BQN1 747 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 DHRS4Q9BTZ2 278 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 ATXN3LQ9H3M9 355 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 SLITRK6Q9H5Y7 841 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 FTSJ1Q9UET6 329 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 TBX20Q9UMR3 447 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 PCDHB2Q9Y5E7 798 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 ATRQ13535 2644 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 MYO16Q9Y6X6 1858 aa7.3□□□□□ -1.24
LDHA-223ENST00000545215 LRRK1Q38SD2 2015 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 A0A1B0GTW7 788 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 PLD2O14939 933 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 CBFA2T2O43439 604 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 SYNCRIPO60506 623 aaKnown RBP7.29□□□□□ -1.24
LDHA-223ENST00000545215 TADA2AO75478 443 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 CSDE1O75534 798 aaKnown RBP7.29□□□□□ -1.24
LDHA-223ENST00000545215 CLEC3AO75596 197 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 DEXIO95424 95 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 CST3P01034 146 aaPredicted RBP7.29□□□□□ -1.24
LDHA-223ENST00000545215 TP53P04637 393 aaPredicted RBP7.29□□□□□ -1.24
LDHA-223ENST00000545215 HSP90AA1P07900 732 aaKnown RBP7.29□□□□□ -1.24
LDHA-223ENST00000545215 PDGFRBP09619 1106 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 PDCP20941 246 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 U2AF2P26368 475 aaKnown RBP eCLIP7.29□□□□□ -1.242e-8■■□□□ 13.2
LDHA-223ENST00000545215 SREBF1P36956 1147 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 CCT2P78371 535 aaKnown RBP7.29□□□□□ -1.24
LDHA-223ENST00000545215 STK3Q13188 491 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 NTRK3Q16288 839 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 DUOXA2Q1HG44 320 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 FAM209AQ5JX71 171 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 SYCP2LQ5T4T6 812 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 NAIF1Q69YI7 327 aaPredicted RBP7.29□□□□□ -1.24
LDHA-223ENST00000545215 USP17L6PQ6QN14 398 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 UBE3DQ7Z6J8 389 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 DCBLD1Q8N8Z6 715 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 KCT2Q8NC54 265 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 LEMD2Q8NC56 503 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 BPIFB1Q8TDL5 484 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 CYB5D2Q8WUJ1 264 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 DPH2Q9BQC3 489 aaPredicted RBP7.29□□□□□ -1.24
LDHA-223ENST00000545215 KLHL25Q9H0H3 589 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 GSX1Q9H4S2 264 aaPredicted RBP7.29□□□□□ -1.24
LDHA-223ENST00000545215 HPS4Q9NQG7 708 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 SH3GLB2Q9NR46 395 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 GKN1Q9NS71 199 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 THG1LQ9NWX6 298 aaKnown RBP7.29□□□□□ -1.24
LDHA-223ENST00000545215 ITGB1BP2Q9UKP3 347 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 AKT3Q9Y243 479 aa7.29□□□□□ -1.24
LDHA-223ENST00000545215 SF3B1O75533 1304 aaKnown RBP eCLIP7.29□□□□□ -1.249e-7■■□□□ 11.6
LDHA-223ENST00000545215 TRAV20A0A0B4J274 112 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 WIPF1O43516 503 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 PCDHGA12O60330 932 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 PLEKHA8P1O95397 391 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 ADH5P11766 374 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 MYCLP1P12525 358 aaPredicted RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 MYL4P12829 197 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 DRD2P14416 443 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 RXRAP19793 462 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 DGKGP49619 791 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 GPC3P51654 580 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 USP11P51784 963 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 CLCN3P51790 818 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 HSP90AA2PQ14568 343 aaPredicted RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 PFKFB3Q16875 520 aaPredicted RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 ZXDCQ2QGD7 858 aaPredicted RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 FNDC3BQ53EP0 1204 aaKnown RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 SGO2Q562F6 1265 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms