RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CACUL1Q86Y37 369 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 TMEM25Q86YD3 366 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 HPS3Q969F9 1004 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 GDF3Q9NR23 364 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 ANAPC2Q9UJX6 822 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 SH3BP1Q9Y3L3 701 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 PLXNA2O75051 1894 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 LACTBL1A8MY62 500 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 TULP1O00294 542 aaPredicted RBP12.43□□□□□ -0.42
VPS26A-204ENST00000467852 PIRO00625 290 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 CYP26A1O43174 497 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 OPA1O60313 960 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 TOM1L1O75674 476 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 SEMA4FO95754 770 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 OLFM2O95897 454 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 NUCB1Q02818 461 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 BNIP3Q12983 259 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 SPATA2LQ8IUW3 424 aaPredicted RBP12.43□□□□□ -0.42
VPS26A-204ENST00000467852 ARL14Q8N4G2 192 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 SLC4A5Q9BY07 1137 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 BTBD1Q9H0C5 482 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 EHD2Q9NZN4 543 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 CSMD1Q96PZ7 3565 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 NAV3Q8IVL0 2385 aa12.43□□□□□ -0.42
VPS26A-204ENST00000467852 RP1L1Q8IWN7 2480 aaPredicted RBP12.43□□□□□ -0.42
VPS26A-204ENST00000467852 ZFC3H1O60293 1989 aaKnown RBP12.42□□□□□ -0.42
VPS26A-204ENST00000467852 ZNF840PA6NDX5 716 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 NEDD8-MDP1E9PL57 170 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 CLDN3O15551 220 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 IFNAR1P17181 557 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 DGKGP49619 791 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 TAF6P49848 677 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 PEX3P56589 373 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 PDIA5Q14554 519 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 NECTIN1Q15223 517 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 NTRK3Q16288 839 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 PROX2Q3B8N5 592 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 HS1BP3Q53T59 392 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 SFMBT2Q5VUG0 894 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 SMC5Q8IY18 1101 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 TRIM22Q8IYM9 498 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 ZSCAN1Q8NBB4 408 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 ABCG4Q9H172 646 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 ADNPQ9H2P0 1102 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 TUFT1Q9NNX1 390 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 PLAAQ9Y263 795 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 RBM19Q9Y4C8 960 aaKnown RBP12.42□□□□□ -0.42
VPS26A-204ENST00000467852 CKAP5Q14008 2032 aa12.42□□□□□ -0.42
VPS26A-204ENST00000467852 OTOGQ6ZRI0 2925 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 KIF26BQ2KJY2 2108 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 CDRT15L2A8MXV6 281 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 CACNG3O60359 315 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 OAS1P00973 400 aaKnown RBP12.41□□□□□ -0.42
VPS26A-204ENST00000467852 SPATA31C1P0DKV0 1188 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 TYRP14679 529 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 NPTX2P47972 431 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 COPAP53621 1224 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 CDH8P55286 799 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 OXCT1P55809 520 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 STRN3Q13033 797 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 E2F5Q15329 346 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 CFAP221Q4G0U5 840 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 FHL5Q5TD97 284 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 RNF20Q5VTR2 975 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 SMYD5Q6GMV2 418 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 DENND5BQ6ZUT9 1274 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 TAS1R3Q7RTX0 852 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 CATSPER3Q86XQ3 398 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 BBS7Q8IWZ6 715 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 OXR1Q8N573 874 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 SSC4DQ8WTU2 575 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 UCMAQ8WVF2 138 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 GRAMD1AQ96CP6 724 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 MOCOSQ96EN8 888 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 ACBD6Q9BR61 282 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 BBS2Q9BXC9 721 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 TRIM9Q9C026 710 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 LHX5Q9H2C1 402 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 KMT5AQ9NQR1 393 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 WDR35Q9P2L0 1181 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 PCDHGA8Q9Y5G5 932 aa12.41□□□□□ -0.42
VPS26A-204ENST00000467852 NF1P21359 2839 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 CD38P28907 300 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 DCTP40126 519 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 TXKP42681 527 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 RXRGP48443 463 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 MCL1Q07820 350 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 NPY5RQ15761 445 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 CALCRLQ16602 461 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 KYAT1Q16773 422 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 ISXQ2M1V0 245 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 TTC22Q5TAA0 569 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 FOXR1Q6PIV2 292 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 PIK3AP1Q6ZUJ8 805 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 FAM177A1Q8N128 213 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-204ENST00000467852 FUBP3Q96I24 572 aaKnown RBP eCLIP12.4□□□□□ -0.42
VPS26A-204ENST00000467852 SPATA17Q96L03 361 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 CEP295NLQ96MC4 621 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 SLC6A18Q96N87 628 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 ORAI3Q9BRQ5 295 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms