RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Ufl1Q8CCJ3 793 aaKnown RBP11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Lgals12Q91VD1 314 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Homer3Q99JP6 356 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Tfr2Q9JKX3 798 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Slc12a7Q9WVL3 1083 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Dctn3Q9Z0Y1 186 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Nid2O88322 1403 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Grin3aA2AIR5 1135 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Srp54bE9PXC0 504 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Cyp27b1O35084 507 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Rad51bO35719 350 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 PrkacaP05132 351 aaKnown RBP11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Prl3b1P09586 222 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Srp54P14576 504 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Kcnj2P35561 428 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Cav1P49817 178 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Arl4cP61208 192 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Tuba1cP68373 449 aaKnown RBP11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Lrrc55Q3UY51 311 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 DcstampQ7TNJ0 470 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Lrrc27Q80YS5 523 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Pou6f2Q8BJI4 691 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Zhx2Q8C0C0 836 aaKnown RBP11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Samd4aQ8CBY1 711 aaKnown RBP11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Zfpm2Q8CCH7 1151 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Trmt6Q8CE96 497 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Scyl2Q8CFE4 930 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Pars2Q8CFI5 475 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Arhgap29Q8CGF1 1266 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Klf11Q8K1S5 502 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Gtf2a1lQ8R4I4 468 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Calml4Q91WQ9 153 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Cyp4f3Q99N16 524 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Serpinb1aQ9D154 379 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Xpo7Q9EPK7 1087 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Clstn1Q9EPL2 979 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 PrccQ9EQC8 491 aaKnown RBP11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Slfn2Q9Z0I6 378 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Pcdh11xF6ZNL5 1338 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Trpm3Q5F4S9 1721 aa11.89□□□□□ -0.51
Trim55-201ENSMUST00000029139 Zscan4-ps1A0A1C7CYV3 506 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Gm3173A6NAS3 172 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Zscan4dA7KBS4 506 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Skor2A7M7C7 1008 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Gm3020E9Q3J7 150 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Olfr173E9QAT7 321 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Gm2897K7N6T7 172 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Men1O88559 611 aaKnown RBP11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Stx8O88983 236 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Gon7P0C8B4 98 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Tnnc2P20801 160 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Gucy2eP52785 1108 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 4933415F23RikQ14BX6 153 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Zscan4fQ3URS2 506 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Ssxb5Q6XAS2 159 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 GypcQ78HU7 95 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Zscan4cQ80VJ6 506 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 AW551984Q8BGF0 804 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Atg16l1Q8C0J2 607 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Gm3411Q8C7R2 150 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Shisa4Q8CA71 197 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Nkiras1Q8CEC5 192 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Fem1cQ8CEF1 617 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Rtn1Q8K0T0 780 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Rps6kl1Q8R2S1 544 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Spon1Q8VCC9 807 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Q91WD4 421 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Krt5Q922U2 580 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Tom1l1Q923U0 474 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Wdr12Q9JJA4 423 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Hey2Q9QUS4 339 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Klrc2Q9WTJ9 238 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Sf3b1Q99NB9 1304 aaKnown RBP11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Mon2Q80TL7 1715 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Tspoap1Q7TNF8 1846 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Gm15155B1B034 138 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Clca3bE9PUL3 1044 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Oog1E9Q5G7 496 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 DgkkE9Q7N4 1118 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Eya2O08575 532 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Foxm1O08696 760 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 DldO08749 509 aaKnown RBP11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Hdac3O88895 424 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 H2-K1P01901 369 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Gh1P06880 216 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Hoxd12P23812 268 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Etv1P41164 477 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Traf6P70196 530 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Npy2rP97295 381 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 RnaselQ05921 735 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Cab39Q06138 341 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Edem3Q2HXL6 931 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Ak8Q32M07 479 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Pbxip1Q3TVI8 727 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Ifit1bl2Q3U687 466 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Trappc3lQ4KL14 181 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Etaa1Q5SVT3 877 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Mcm7Q61881 719 aaKnown RBP11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Slc26a2Q62273 739 aa11.88□□□□□ -0.51
Trim55-201ENSMUST00000029139 Olfr1037Q7TR84 321 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms