Protein–RNA interactions for Protein: Q8R4I4

Gtf2a1l, TFIIA-alpha and beta-like factor, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1lQ8R4I4 Gm25239-201ENSMUST00000174915 86 ntBASIC35.76■■■■□ 3.32
Gtf2a1lQ8R4I4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Gtf2a1lQ8R4I4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Gtf2a1lQ8R4I4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Gtf2a1lQ8R4I4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Gtf2a1lQ8R4I4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
Gtf2a1lQ8R4I4 Gm15042-201ENSMUST00000120212 883 ntBASIC31.27■■■□□ 2.6
Gtf2a1lQ8R4I4 Gm24109-201ENSMUST00000175489 103 ntBASIC30.94■■■□□ 2.54
Gtf2a1lQ8R4I4 Psd-208ENSMUST00000224556 2034 ntBASIC30.76■■■□□ 2.52
Gtf2a1lQ8R4I4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Gtf2a1lQ8R4I4 Gm15045-201ENSMUST00000117359 883 ntBASIC30.54■■■□□ 2.48
Gtf2a1lQ8R4I4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Gtf2a1lQ8R4I4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Gtf2a1lQ8R4I4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Gtf2a1lQ8R4I4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Gtf2a1lQ8R4I4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Gtf2a1lQ8R4I4 Gm23366-201ENSMUST00000175022 89 ntBASIC29.9■■■□□ 2.38
Gtf2a1lQ8R4I4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.9■■■□□ 2.38
Gtf2a1lQ8R4I4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Gtf2a1lQ8R4I4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Gtf2a1lQ8R4I4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Gtf2a1lQ8R4I4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Gtf2a1lQ8R4I4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Gtf2a1lQ8R4I4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.29
Gtf2a1lQ8R4I4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Gtf2a1lQ8R4I4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Gtf2a1lQ8R4I4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Gtf2a1lQ8R4I4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Gtf2a1lQ8R4I4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Gtf2a1lQ8R4I4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.11■■■□□ 2.25
Gtf2a1lQ8R4I4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
Gtf2a1lQ8R4I4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Gtf2a1lQ8R4I4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Gtf2a1lQ8R4I4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
Gtf2a1lQ8R4I4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.88■■■□□ 2.21
Gtf2a1lQ8R4I4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Gtf2a1lQ8R4I4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.83■■■□□ 2.21
Gtf2a1lQ8R4I4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.68■■■□□ 2.18
Gtf2a1lQ8R4I4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Gtf2a1lQ8R4I4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Gtf2a1lQ8R4I4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.59■■■□□ 2.17
Gtf2a1lQ8R4I4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Gtf2a1lQ8R4I4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Gtf2a1lQ8R4I4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Gtf2a1lQ8R4I4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Gtf2a1lQ8R4I4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.35■■■□□ 2.13
Gtf2a1lQ8R4I4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Gtf2a1lQ8R4I4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Gtf2a1lQ8R4I4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.28■■■□□ 2.12
Gtf2a1lQ8R4I4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.25■■■□□ 2.11
Gtf2a1lQ8R4I4 Gm25238-201ENSMUST00000174914 89 ntBASIC28.21■■■□□ 2.11
Gtf2a1lQ8R4I4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Gtf2a1lQ8R4I4 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.17■■■□□ 2.1
Gtf2a1lQ8R4I4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Gtf2a1lQ8R4I4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Gtf2a1lQ8R4I4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Gtf2a1lQ8R4I4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Gtf2a1lQ8R4I4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Gtf2a1lQ8R4I4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Gtf2a1lQ8R4I4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Gtf2a1lQ8R4I4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.7■■■□□ 2.02
Gtf2a1lQ8R4I4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Gtf2a1lQ8R4I4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.56■■■□□ 2
Gtf2a1lQ8R4I4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Gtf2a1lQ8R4I4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Gtf2a1lQ8R4I4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.49■■□□□ 1.99
Gtf2a1lQ8R4I4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Gtf2a1lQ8R4I4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Gtf2a1lQ8R4I4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Gtf2a1lQ8R4I4 Gm27325-201ENSMUST00000175467 74 ntBASIC27.41■■□□□ 1.98
Gtf2a1lQ8R4I4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.39■■□□□ 1.98
Gtf2a1lQ8R4I4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.38■■□□□ 1.97
Gtf2a1lQ8R4I4 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.36■■□□□ 1.97
Gtf2a1lQ8R4I4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Gtf2a1lQ8R4I4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Gtf2a1lQ8R4I4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Gtf2a1lQ8R4I4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
Gtf2a1lQ8R4I4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.25■■□□□ 1.95
Gtf2a1lQ8R4I4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Gtf2a1lQ8R4I4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Gtf2a1lQ8R4I4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Gtf2a1lQ8R4I4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.09■■□□□ 1.93
Gtf2a1lQ8R4I4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Gtf2a1lQ8R4I4 Gm25262-201ENSMUST00000174934 133 ntBASIC27.07■■□□□ 1.92
Gtf2a1lQ8R4I4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Gtf2a1lQ8R4I4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Gtf2a1lQ8R4I4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Gtf2a1lQ8R4I4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Gtf2a1lQ8R4I4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Gtf2a1lQ8R4I4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Gtf2a1lQ8R4I4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Gtf2a1lQ8R4I4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Gtf2a1lQ8R4I4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Gtf2a1lQ8R4I4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Gtf2a1lQ8R4I4 Rab21-202ENSMUST00000218831 843 ntBASIC26.92■■□□□ 1.9
Gtf2a1lQ8R4I4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Gtf2a1lQ8R4I4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.84■■□□□ 1.89
Gtf2a1lQ8R4I4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Gtf2a1lQ8R4I4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.81■■□□□ 1.88
Gtf2a1lQ8R4I4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 175.9 ms