Protein–RNA interactions for Protein: Q2HXL6

Edem3, ER degradation-enhancing alpha-mannosidase-like protein 3, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Edem3Q2HXL6 Gm25239-201ENSMUST00000174915 86 ntBASIC41.49■■■■■ 4.23
Edem3Q2HXL6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.34■■■■□ 3.73
Edem3Q2HXL6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
Edem3Q2HXL6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Edem3Q2HXL6 Gm15042-201ENSMUST00000120212 883 ntBASIC36.32■■■■□ 3.4
Edem3Q2HXL6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
Edem3Q2HXL6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.01■■■■□ 3.35
Edem3Q2HXL6 Gm24109-201ENSMUST00000175489 103 ntBASIC35.88■■■■□ 3.33
Edem3Q2HXL6 Gm15045-201ENSMUST00000117359 883 ntBASIC35.49■■■■□ 3.27
Edem3Q2HXL6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Edem3Q2HXL6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.01■■■■□ 3.2
Edem3Q2HXL6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Edem3Q2HXL6 Gm23366-201ENSMUST00000175022 89 ntBASIC34.68■■■■□ 3.14
Edem3Q2HXL6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Edem3Q2HXL6 Psd-208ENSMUST00000224556 2034 ntBASIC34.54■■■■□ 3.12
Edem3Q2HXL6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Edem3Q2HXL6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.04■■■■□ 3.04
Edem3Q2HXL6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Edem3Q2HXL6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.02■■■■□ 3.04
Edem3Q2HXL6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Edem3Q2HXL6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Edem3Q2HXL6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.53■■■□□ 2.96
Edem3Q2HXL6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.48■■■□□ 2.95
Edem3Q2HXL6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Edem3Q2HXL6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Edem3Q2HXL6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
Edem3Q2HXL6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Edem3Q2HXL6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.27■■■□□ 2.92
Edem3Q2HXL6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Edem3Q2HXL6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.19■■■□□ 2.9
Edem3Q2HXL6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
Edem3Q2HXL6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Edem3Q2HXL6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.13■■■□□ 2.89
Edem3Q2HXL6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Edem3Q2HXL6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Edem3Q2HXL6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Edem3Q2HXL6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Edem3Q2HXL6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.81■■■□□ 2.84
Edem3Q2HXL6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Edem3Q2HXL6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.74■■■□□ 2.83
Edem3Q2HXL6 Gm25238-201ENSMUST00000174914 89 ntBASIC32.72■■■□□ 2.83
Edem3Q2HXL6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Edem3Q2HXL6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Edem3Q2HXL6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Edem3Q2HXL6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Edem3Q2HXL6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Edem3Q2HXL6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.28■■■□□ 2.76
Edem3Q2HXL6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Edem3Q2HXL6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Edem3Q2HXL6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
Edem3Q2HXL6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Edem3Q2HXL6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Edem3Q2HXL6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.98■■■□□ 2.71
Edem3Q2HXL6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Edem3Q2HXL6 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.88■■■□□ 2.69
Edem3Q2HXL6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Edem3Q2HXL6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.86■■■□□ 2.69
Edem3Q2HXL6 Gm27325-201ENSMUST00000175467 74 ntBASIC31.83■■■□□ 2.69
Edem3Q2HXL6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Edem3Q2HXL6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Edem3Q2HXL6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Edem3Q2HXL6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.73■■■□□ 2.67
Edem3Q2HXL6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Edem3Q2HXL6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
Edem3Q2HXL6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.61■■■□□ 2.65
Edem3Q2HXL6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Edem3Q2HXL6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Edem3Q2HXL6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Edem3Q2HXL6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.43■■■□□ 2.62
Edem3Q2HXL6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Edem3Q2HXL6 Gm25262-201ENSMUST00000174934 133 ntBASIC31.36■■■□□ 2.61
Edem3Q2HXL6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Edem3Q2HXL6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Edem3Q2HXL6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Edem3Q2HXL6 Rab21-202ENSMUST00000218831 843 ntBASIC31.22■■■□□ 2.59
Edem3Q2HXL6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Edem3Q2HXL6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.2■■■□□ 2.59
Edem3Q2HXL6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.19■■■□□ 2.58
Edem3Q2HXL6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Edem3Q2HXL6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Edem3Q2HXL6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.13■■■□□ 2.57
Edem3Q2HXL6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Edem3Q2HXL6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Edem3Q2HXL6 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.05■■■□□ 2.56
Edem3Q2HXL6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Edem3Q2HXL6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.92■■■□□ 2.54
Edem3Q2HXL6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Edem3Q2HXL6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Edem3Q2HXL6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.81■■■□□ 2.52
Edem3Q2HXL6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Edem3Q2HXL6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.75■■■□□ 2.51
Edem3Q2HXL6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Edem3Q2HXL6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Edem3Q2HXL6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.73■■■□□ 2.51
Edem3Q2HXL6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Edem3Q2HXL6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.64■■■□□ 2.5
Edem3Q2HXL6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Edem3Q2HXL6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Edem3Q2HXL6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Edem3Q2HXL6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms